SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000244558
Gene: KCNK15-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr20:44694892-44746021 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_111200097 chr20:44598209-44696274 Sample_02_1112 T lymphocyte THP-6 T-ALL 97 20 2776 242 5 125 2414 ADA,PKIG,LINC01260,WISP2,KCNK15-AS1,KCNK15
SE_02_153700478 chr20:44685377-44705798 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 478 9 553 53 1 42 66 WISP2,KCNK15,LINC01260,KCNK15-AS1,ADA
SE_02_153500560 chr20:44685430-44705291 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 560 4 537 53 1 39 66 WISP2,KCNK15,LINC01260,KCNK15-AS1,ADA
SE_02_132801140 chr20:44687907-44702961 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1140 8 399 37 1 29 66 WISP2,KCNK15,LINC01260,KCNK15-AS1,ADA
SE_02_114000025 chr20:44689959-44705306 Sample_02_1140 Peripheral nerve MPNST007_PRC2 WT 25 7 382 25 1 39 66 WISP2,KCNK15,LINC01260,KCNK15-AS1,ADA
SE_02_061501128 chr20:44691327-44706832 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 1128 6 395 23 2 42 66 WISP2,KCNK15,LINC01260,KCNK15-AS1,ADA
Genomic distribution of SEs associated with KCNK15-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of KCNK15-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)