Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000259207
Gene: ITGB3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:47253827-47313743 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104300914 chr17:47137924-47223384 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 914 33 2076 198 1 144 1123 CDC27,MYL4,ITGB3
SE_02_146800215 chr17:47152622-47240573 Sample_02_1468 Blood HUDEP-2_WT 215 18 2231 208 5 106 1066 CDC27,MYL4,ITGB3
SE_02_146700116 chr17:47153765-47240827 Sample_02_1467 Blood HUDEP-2_LRFKO 116 18 2217 207 5 106 1066 CDC27,MYL4,ITGB3
SE_02_038200180 chr17:47161475-47253370 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 180 10 2387 285 10 66 912 MYL4,CDC27,ITGB3
SE_02_130200619 chr17:47161802-47207920 Sample_02_1302 Lymphoma RL DMSO 619 21 1095 113 1 66 198 CDC27,MYL4,ITGB3
SE_02_099900524 chr17:47161868-47231567 Sample_02_0999 Lymphoma OCI-LY1_966 524 21 1729 163 3 66 912 CDC27,MYL4,ITGB3
SE_02_142900707 chr17:47162138-47206106 Sample_02_1429 Blood GM12878_WT 707 10 1033 111 1 66 198 CDC27,MYL4,ITGB3,GOSR2,EFCAB13
SE_02_074600064 chr17:47162144-47240556 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 64 31 2021 197 5 66 912 CDC27,MYL4,ITGB3
SE_02_092100119 chr17:47162298-47241229 Sample_02_0921 Heart embryonic heart_CS22 119 30 2044 206 6 66 912 CDC27,MYL4,ITGB3
SE_02_122900326 chr17:47169046-47241139 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 326 44 1886 189 6 66 912 CDC27,MYL4,ITGB3,EFCAB13
SE_02_030100552 chr17:47171768-47241674 Sample_02_0301 Neuroblastoma GIMEN 552 10 1855 187 6 58 878 MYL4,CDC27,ITGB3
SE_02_044501126 chr17:47172572-47206685 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 1126 16 831 87 1 47 144 CDC27,MYL4,ITGB3
SE_02_044401015 chr17:47172723-47207599 Sample_02_0444 Bone osteosarcoma tumor P10 1015 13 859 88 1 47 144 CDC27,MYL4,ITGB3
SE_04_000100182 chr17:47176593-47240526 Sample_04_0001 Blood heat shocked K562 182 15 1715 163 5 47 858 CDC27,MYL4,ITGB3,EFCAB13
SE_02_113000250 chr17:47176715-47240575 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 250 15 1713 163 5 47 858 CDC27,MYL4,ITGB3,EFCAB13
SE_02_111600378 chr17:47176752-47240638 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 378 11 1714 163 5 47 858 CDC27,MYL4,ITGB3,EFCAB13
SE_04_000200264 chr17:47176768-47240653 Sample_04_0002 Blood cold shocked K562 264 13 1714 163 5 47 858 CDC27,MYL4,ITGB3,EFCAB13
SE_02_103300764 chr17:47177013-47241296 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 764 13 1731 173 6 47 858 CDC27,MYL4,ITGB3,EFCAB13
SE_02_082600468 chr17:47181140-47241500 Sample_02_0826 Stomach gastric tumor 468 22 1648 163 6 47 858 CDC27,MYL4,ITGB3
SE_02_021300456 chr17:47181501-47209677 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 456 4 705 68 1 47 291 MYL4,CDC27,ITGB3
SE_02_101800112 chr17:47181839-47205155 Sample_02_1018 Erythroblast CD34+ Hematopoietic stem/progenitor cells_12 days 112 11 588 60 1 44 114 CDC27,MYL4,ITGB3
SE_02_130400540 chr17:47182557-47245690 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 540 21 1763 186 7 44 828 CDC27,MYL4,ITGB3
SE_02_099800512 chr17:47182860-47230297 Sample_02_0998 Lymphoma OCI-LY1_DMSO 512 18 1234 109 2 44 828 CDC27,MYL4,ITGB3
SE_02_130300668 chr17:47183072-47245621 Sample_02_1303 Lymphoma RL_tazemetostat 668 16 1749 185 7 44 828 CDC27,MYL4,ITGB3
SE_02_115300524 chr17:47183102-47208224 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 524 4 647 64 1 44 114 CDC27,MYL4,ITGB3
SE_02_115500360 chr17:47183430-47219225 Sample_02_1155 Lymphoma RL_R1446C_gRNA1_KDAC005 360 6 910 89 1 44 341 CDC27,MYL4,ITGB3
SE_02_012200344 chr17:47187874-47222207 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 344 5 930 89 1 37 559 MYL4,CDC27,ITGB3
SE_02_045400414 chr17:47187893-47229826 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 414 10 1126 101 2 37 828 CDC27,MYL4,ITGB3
SE_02_045600596 chr17:47190389-47225371 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 596 9 968 87 2 11 714 MYL4,CDC27,ITGB3
SE_01_011501161 chr17:47190474-47206474 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1161 5 455 48 1 11 0 CDC27,MYL4,ITGB3
SE_02_078400628 chr17:47191982-47241064 Sample_02_0784 Blood OSU-CLL 628 6 1415 137 4 6 714 MYL4,CDC27,ITGB3
SE_01_005500615 chr17:47192464-47208670 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 615 3 460 46 0 6 0 CDC27,MYL4,ITGB3
SE_02_109900299 chr17:47197052-47240703 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 299 15 1256 115 4 0 714 MYL4,CDC27,ITGB3
SE_02_074100904 chr17:47197142-47206374 Sample_02_0741 Muscle RH30 904 3 272 29 0 0 0 CDC27,MYL4,ITGB3
SE_02_082700453 chr17:47198901-47226119 Sample_02_0827 Stomach normal gastric 453 7 748 62 1 0 714 MYL4,CDC27,ITGB3
SE_00_000500514 chr17:47199148-47207973 Sample_00_0005 Blood B-cell 514 2 266 25 0 0 0 CDC27,MYL4,ITGB3
SE_02_106500354 chr17:47199793-47209195 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 354 2 260 23 0 0 60 MYL4,CDC27,ITGB3
SE_02_115600520 chr17:47200328-47230239 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 520 9 815 65 1 0 714 MYL4,CDC27,ITGB3
SE_02_091501083 chr17:47200353-47226891 Sample_02_0915 Heart left ventricle_DCM_LV1371 1083 8 727 57 1 0 714 MYL4,CDC27,ITGB3
SE_01_008100664 chr17:47203181-47241340 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 664 5 1097 106 5 0 714 MYL4,CDC27,ITGB3
SE_01_002300099 chr17:47203375-47240901 Sample_01_0023 Embryo cardiac-muscle-cell 99 4 1075 100 4 0 714 MYL4,CDC27,ITGB3
SE_02_074700989 chr17:47203600-47212256 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 989 1 217 20 0 0 170 MYL4,CDC27,ITGB3
SE_02_090801485 chr17:47203659-47240761 Sample_02_0908 Heart left ventricle_DCM_LV1262 1485 7 1062 95 4 0 714 MYL4,CDC27,ITGB3
SE_02_092500301 chr17:47203834-47241100 Sample_02_0925 Heart fetal heart_PCW17_12570 301 15 1073 102 5 0 714 MYL4,CDC27,ITGB3
SE_02_092400237 chr17:47203866-47251737 Sample_02_0924 Heart fetal heart_PCW10_12569 237 13 1365 175 8 0 714 MYL4,CDC27,ITGB3
SE_02_092300309 chr17:47203881-47252557 Sample_02_0923 Heart fetal heart_PCW10_12522 309 16 1384 179 9 0 714 MYL4,CDC27,ITGB3
SE_02_092200263 chr17:47203889-47253708 Sample_02_0922 Heart fetal heart_PCW10_12434 263 14 1411 184 9 0 725 MYL4,CDC27,ITGB3
SE_02_074500119 chr17:47204249-47230244 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 119 13 690 51 1 0 714 MYL4,CDC27,ITGB3
SE_02_082000453 chr17:47218493-47241561 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 453 5 722 70 5 0 487 MYL4,CDC27,ITGB3
SE_02_095000522 chr17:47219165-47242520 Sample_02_0950 Umbilical vein HUVEC_WT 522 16 730 75 5 0 487 MYL4,CDC27,ITGB3
SE_02_076900551 chr17:47220204-47241817 Sample_02_0769 Ovary HEYA8 551 15 682 68 5 0 390 MYL4,CDC27,ITGB3
SE_02_094900473 chr17:47220866-47242535 Sample_02_0949 Umbilical artery HUAEC_WT 473 18 684 71 5 0 386 MYL4,CDC27,ITGB3
SE_02_002700727 chr17:47222390-47241620 Sample_02_0027 Umbilical vein HUVEC_VEGF_4h 727 3 585 65 5 0 229 MYL4,CDC27,ITGB3
SE_02_053301117 chr17:47222603-47241208 Sample_02_0533 Blood vessel Circle of Willis_54y 1117 9 560 61 5 0 187 MYL4,CDC27,ITGB3
SE_02_058500599 chr17:47222747-47241347 Sample_02_0585 Umbilical vein HUVEC 0hour 599 6 563 62 5 0 180 MYL4,CDC27,ITGB3
SE_02_122801027 chr17:47222783-47241010 Sample_02_1228 Mammary gland MDA-MB-231_2 1027 8 553 59 4 0 180 MYL4,CDC27,ITGB3
SE_02_083100790 chr17:47222827-47241307 Sample_02_0831 Umblical vein HUVECs_TNF0min 790 11 563 62 5 0 179 MYL4,CDC27,ITGB3
SE_02_053400855 chr17:47222837-47240902 Sample_02_0534 Blood vessel Circle of Willis_60y 855 11 547 56 4 0 179 MYL4,CDC27,ITGB3
SE_02_077100955 chr17:47222904-47241291 Sample_02_0771 Ovary OVCA429_shGRHL2 955 12 561 61 5 0 157 MYL4,CDC27,ITGB3
SE_02_130901250 chr17:47222940-47241200 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 1250 5 557 60 5 0 153 MYL4,CDC27,ITGB3
SE_02_158100715 chr17:47222977-47241184 Sample_02_1581 Renal OS-LM1 715 8 554 60 5 0 147 MYL4,CDC27,ITGB3
SE_02_156900554 chr17:47222987-47241641 Sample_02_1569 Endothelial Endothelial cells 554 3 572 64 5 0 146 MYL4,CDC27,ITGB3
SE_02_062000543 chr17:47223057-47241044 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 543 7 548 58 4 0 140 MYL4,CDC27,ITGB3,EFCAB13
SE_02_043000407 chr17:47223443-47241774 Sample_02_0430 Kidney 12364284 407 7 567 64 5 0 60 MYL4,CDC27,ITGB3
SE_00_000301515 chr17:47224214-47241531 Sample_00_0003 Adrenal gland adrenal-gland_97d 1515 2 546 62 5 0 0 CDC27,MYL4,ITGB3
SE_01_002600424 chr17:47224359-47241469 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 424 3 535 61 5 0 0 CDC27,MYL4,ITGB3
SE_02_047401459 chr17:47224695-47241448 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1459 4 524 61 5 0 0 CDC27,MYL4,ITGB3
SE_02_042900653 chr17:47225159-47241776 Sample_02_0429 Kidney 12364284_VHL+ 653 11 519 62 4 0 0 CDC27,MYL4,ITGB3
SE_02_057201254 chr17:47225597-47243336 Sample_02_0572 Brain LN229_1_mM_glucose 1254 6 559 73 5 0 0 CDC27,MYL4,ITGB3
SE_02_139400392 chr17:47228959-47241565 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 392 5 416 54 4 0 0 CDC27,MYL4,ITGB3

Genomic distribution of SEs associated with ITGB3

The strength of the tissue affected by the gene


Expression of ITGB3