SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000263528
Gene: IKBKE Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:206470476-206496889 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_144500142 chr1:206240079-206420810 Sample_02_1445 Adipose SW872_TAZ4SA 142 62 1790 101 0 619 671 SRGAP2,IKBKE,FAM72A
SE_02_156800303 chr1:206349395-206431150 Sample_02_1568 Heart Cardiac progenitor cells 303 12 1428 69 3 288 714 SRGAP2,IKBKE,MIR6769B
SE_02_143600920 chr1:206349947-206435551 Sample_02_1436 Liver LSEC-Ctrl 920 21 1531 81 3 296 714 SRGAP2,IKBKE,MIR6769B
SE_02_085700375 chr1:206350287-206423373 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 375 20 1185 44 1 283 660 SRGAP2,IKBKE
SE_02_088200271 chr1:206355725-206431120 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 271 14 1333 66 3 276 714 SRGAP2,IKBKE,MIR6769B
SE_02_088300320 chr1:206356730-206431183 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 320 14 1312 66 3 272 714 SRGAP2,IKBKE,MIR6769B
SE_01_011500363 chr1:206364588-206431371 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 363 17 1188 58 3 248 714 SRGAP2,IKBKE,MIR6769B
SE_02_074400815 chr1:206404731-206423316 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 815 6 413 16 1 86 365 SRGAP2,IKBKE
SE_02_045200928 chr1:206418867-206465479 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 928 11 1253 135 12 292 1700 SRGAP2,IKBKE,RASSF5,MIR6769B
SE_02_104600966 chr1:206427280-206497963 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 966 22 2002 213 17 412 3803 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_151900518 chr1:206437811-206497890 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 518 17 1725 188 14 370 3682 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_104300607 chr1:206442123-206501501 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 607 25 1719 188 13 359 3531 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_152000559 chr1:206445143-206497883 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 559 13 1543 172 12 343 3531 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_077101125 chr1:206449315-206482383 Sample_02_0771 Ovary OVCA429_shGRHL2 1125 9 999 119 7 263 2581 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_104700393 chr1:206455033-206494553 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 393 22 1182 117 6 234 2838 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_049200905 chr1:206456679-206481231 Sample_02_0492 Pharyng Detroit 562_LPS 905 5 754 84 4 186 2023 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_064000694 chr1:206456732-206481747 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 694 8 771 85 4 186 2023 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_064300462 chr1:206456750-206481770 Sample_02_0643 Mammary gland MDA-MB-436 462 6 771 85 4 186 2023 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_064900573 chr1:206462512-206472640 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 573 5 303 32 2 39 547 IKBKE,SRGAP2,RASSF5,MIR6769B
SE_02_064502088 chr1:206462730-206483027 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 2088 6 655 75 3 110 1627 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_064400779 chr1:206463397-206481162 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 779 3 580 63 3 109 1543 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_094700697 chr1:206463498-206482473 Sample_02_0947 Tongue Cal27 697 4 623 69 3 109 1531 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_078100571 chr1:206463525-206481498 Sample_02_0781 Lymphoma Pfeiffer_DMSO 571 9 587 65 3 109 1527 MIR6769B,IKBKE,SRGAP2,RASSF5
SE_02_064200465 chr1:206464488-206482301 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 465 5 592 63 3 96 1395 MIR6769B,IKBKE,RASSF5
SE_02_060300795 chr1:206464564-206483680 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 795 4 636 69 4 97 1388 MIR6769B,IKBKE,RASSF5
SE_02_135301124 chr1:206469026-206473630 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 1124 1 161 13 2 30 373 IKBKE,RASSF5,MIR6769B
SE_02_103500424 chr1:206471825-206545662 Sample_02_1035 Mammary gland HCC70_Vehicle 424 35 2016 175 9 251 2281 MIR6769B,IKBKE,RASSF5
SE_02_103602341 chr1:206471905-206501939 Sample_02_1036 Mammary gland HCC70_XY018 2341 12 909 89 4 127 1946 MIR6769B,IKBKE,RASSF5
SE_02_139400546 chr1:206471976-206491675 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 546 3 612 62 2 96 1449 MIR6769B,IKBKE,RASSF5
SE_02_126800968 chr1:206472658-206514361 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 968 7 1184 118 5 183 2188 MIR6769B,IKBKE,RASSF5
SE_02_098800868 chr1:206480902-206504255 Sample_02_0988 Blood K562_EPZ 868 9 660 65 4 58 832 IKBKE,RASSF5,MIR6769B,C1orf147
SE_02_114200386 chr1:206481252-206502466 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 386 5 603 53 3 52 832 IKBKE,RASSF5,MIR6769B
SE_01_010701196 chr1:206482281-206526056 Sample_01_0107 Esophagus esophagus squamous epithelium 1196 12 1152 98 5 141 1074 IKBKE,RASSF5,MIR6769B
SE_02_149200018 chr1:206485912-206592546 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 18 27 2781 246 11 260 2205 EIF2D,IKBKE,RASSF5,MIR6769B,DYRK3
SE_02_092100887 chr1:206486866-206540899 Sample_02_0921 Heart embryonic heart_CS22 887 14 1415 113 5 165 1020 IKBKE,RASSF5,MIR6769B
SE_02_082700533 chr1:206488506-206512181 Sample_02_0827 Stomach normal gastric 533 5 615 61 3 83 843 IKBKE,RASSF5,MIR6769B
SE_01_010300268 chr1:206494713-206541984 Sample_01_0103 Pancreas pancreas_37y 268 13 1220 102 6 141 551 IKBKE,RASSF5,MIR6769B,C1orf147
SE_01_010100211 chr1:206494782-206560775 Sample_01_0101 Pancreas pancreas_54y 211 14 1679 147 11 173 762 IKBKE,RASSF5,MIR6769B,C1orf147
SE_02_081800691 chr1:206494936-206541933 Sample_02_0818 Ovary High-grade serous ovarian cancer 691 7 1210 100 6 141 551 IKBKE,RASSF5,MIR6769B
SE_02_081900287 chr1:206495342-206544905 Sample_02_0819 Ovary Mucinous ovarian cancer 287 10 1268 103 6 144 551 IKBKE,RASSF5,MIR6769B
SE_02_151200609 chr1:206497561-206515224 Sample_02_1512 Lung Purified AT2 cells 609 4 444 41 1 78 242 RASSF5,IKBKE,MIR6769B
SE_02_151300918 chr1:206498365-206515348 Sample_02_1513 Lung Transitional AT2->1 cells 918 6 429 39 1 69 242 RASSF5,IKBKE,MIR6769B
SE_02_077001131 chr1:206498521-206536411 Sample_02_0770 Ovary OVCA429_shLuc 1131 16 971 72 3 107 242 RASSF5,IKBKE,MIR6769B
SE_02_123000642 chr1:206498954-206522008 Sample_02_1230 Lung PC9 642 8 591 47 1 88 242 RASSF5,IKBKE,MIR6769B
SE_02_151400752 chr1:206499057-206522016 Sample_02_1514 Lung Differentiated AT1-like cells 752 4 587 47 1 88 242 RASSF5,IKBKE,MIR6769B
SE_02_008400296 chr1:206500531-206525839 Sample_02_0084 Oral cavity KB_5Z-7-oxozeaenol 296 4 628 52 2 91 242 RASSF5,IKBKE
SE_02_088601650 chr1:206500758-206541194 Sample_02_0886 Skin foreskin_ p63KLF4 1650 10 1034 80 3 124 335 RASSF5,IKBKE,MIR6769B
SE_02_072600147 chr1:206500788-206514604 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 147 3 336 34 1 63 242 RASSF5,IKBKE,MIR6769B
SE_00_001100503 chr1:206500804-206526093 Sample_00_0011 Esophagus esophagus 503 5 627 52 2 93 242 RASSF5,IKBKE
SE_00_004100408 chr1:206500815-206541890 Sample_00_0041 Stomach stomach_3y 408 9 1049 83 4 124 335 RASSF5,IKBKE
SE_02_059000441 chr1:206500824-206526417 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 441 8 633 53 3 94 242 RASSF5,IKBKE,MIR6769B
SE_02_113100550 chr1:206500838-206526575 Sample_02_1131 Pancreas T3M4 wt 550 9 635 54 3 94 242 RASSF5,IKBKE,MIR6769B
SE_02_053000861 chr1:206501080-206525610 Sample_02_0530 Mammary gland MCF10A 861 5 607 52 2 91 242 RASSF5,IKBKE,MIR6769B
SE_02_076700936 chr1:206501127-206521956 Sample_02_0767 Ovary OVCA429 936 9 526 45 1 86 242 RASSF5,IKBKE,MIR6769B
SE_00_005800440 chr1:206501151-206541219 Sample_00_0058 Stomach stomach 34y 440 12 1024 80 3 124 335 RASSF5,IKBKE,MIR6769B
SE_02_087500790 chr1:206501715-206520155 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 790 1 461 40 1 79 242 RASSF5,IKBKE,MIR6769B
SE_02_135900917 chr1:206503903-206525715 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 917 5 545 41 1 83 242 RASSF5,IKBKE,MIR6769B
SE_02_072500452 chr1:206504060-206524975 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 452 5 525 37 1 83 242 RASSF5,IKBKE,MIR6769B
SE_02_032601316 chr1:206505741-206556877 Sample_02_0326 Liver hepatocytes_d3 1316 9 1296 102 7 122 335 RASSF5,IKBKE
SE_02_016800231 chr1:206511351-206561162 Sample_02_0168 Prostate LNCaP 231 6 1268 100 8 111 304 RASSF5,IKBKE
SE_02_104601155 chr1:206516645-206585534 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1155 24 1794 153 8 122 651 RASSF5,IKBKE,MIR6769B,EIF2D
Genomic distribution of SEs associated with IKBKE
Genome Browser

The strength of the tissue affected by the gene

Expression of IKBKE

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)