Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000171476 |
| Gene: | HOPX | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr4:56647988-56681899 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_007400003 | chr4:56610662-56662494 |
Sample_02_0074 | Other | 90-8TL_PDJQ | 3 | 5 | 1505 | 154 | 3 | 86 | 507 | HOPX |
| SE_02_007300004 | chr4:56611138-56670797 |
Sample_02_0073 | Other | 90-8TL_DMSO | 4 | 6 | 1731 | 168 | 3 | 96 | 507 | HOPX |
| SE_02_048001085 | chr4:56612328-56642610 |
Sample_02_0480 | Gingival epithelial | HGEP | 1085 | 9 | 926 | 62 | 2 | 28 | 0 | HOPX |
| SE_02_006300954 | chr4:56612364-56643048 |
Sample_02_0063 | Skin | Keratinocytes | 954 | 5 | 935 | 62 | 2 | 28 | 0 | HOPX |
| SE_02_141000614 | chr4:56619177-56690350 |
Sample_02_1410 | Brain | GSC6 | 614 | 13 | 2022 | 184 | 4 | 154 | 597 | HOPX |
| SE_02_138900364 | chr4:56619472-56666199 |
Sample_02_1389 | Peripheral blood | SUP-M2_ALK+ | 364 | 8 | 1333 | 147 | 2 | 84 | 507 | HOPX |
| SE_02_061001483 | chr4:56630577-56654334 |
Sample_02_0610 | Liposarcoma | MLS 1765-92 | 1483 | 5 | 696 | 65 | 0 | 37 | 162 | HOPX |
| SE_02_080000337 | chr4:56630625-56666829 |
Sample_02_0800 | Brain | 3679 | 337 | 7 | 1043 | 132 | 1 | 63 | 507 | HOPX |
| SE_02_119300071 | chr4:56630650-56706117 |
Sample_02_1193 | Brain | GBM27 | 71 | 21 | 2205 | 222 | 3 | 166 | 597 | HOPX |
| SE_02_124100722 | chr4:56637045-56659459 |
Sample_02_1241 | Skin | MCC26_virus_negative | 722 | 8 | 616 | 84 | 0 | 55 | 507 | HOPX |
| SE_02_151400749 | chr4:56640862-56681287 |
Sample_02_1514 | Lung | Differentiated AT1-like cells | 749 | 5 | 1115 | 114 | 2 | 98 | 532 | HOPX |
| SE_02_045500601 | chr4:56647218-56656963 |
Sample_02_0455 | Th17 lymphocytes | Th17-IL-10+ Day 5 | 601 | 2 | 257 | 46 | 0 | 33 | 434 | HOPX |
| SE_02_085700886 | chr4:56648212-56691075 |
Sample_02_0857 | Glioblastoma | Glioblastoma neurosphere cell_HF-3035 | 886 | 10 | 1187 | 124 | 3 | 123 | 570 | HOPX |
| SE_02_117700441 | chr4:56649818-56690923 |
Sample_02_1177 | Brain | GBM05 | 441 | 15 | 1146 | 122 | 3 | 116 | 500 | HOPX |
| SE_02_118700146 | chr4:56650537-56708231 |
Sample_02_1187 | Brain | GBM16 | 146 | 25 | 1678 | 180 | 3 | 149 | 490 | HOPX |
| SE_02_097700196 | chr4:56653307-56705201 |
Sample_02_0977 | Brain | 2089_H3.3K27WT | 196 | 23 | 1499 | 163 | 3 | 129 | 435 | HOPX |
| SE_02_077501892 | chr4:56662541-56706957 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 1892 | 14 | 1318 | 104 | 2 | 106 | 90 | HOPX |
| SE_02_118800194 | chr4:56665903-56705411 |
Sample_02_1188 | Brain | GBM18 | 194 | 10 | 1156 | 90 | 2 | 102 | 90 | HOPX |
| SE_02_127800363 | chr4:56668564-56704962 |
Sample_02_1278 | Chordoma | UCH1_DMSO_48h | 363 | 10 | 1054 | 87 | 2 | 99 | 90 | HOPX |
| SE_00_003100317 | chr4:56671015-56708690 |
Sample_00_0031 | Placenta | placenta | 317 | 9 | 1099 | 92 | 2 | 101 | 90 | HOPX |
| SE_01_008700870 | chr4:56673656-56704977 |
Sample_01_0087 | Thyroid gland | thyroid-gland | 870 | 4 | 896 | 84 | 1 | 78 | 90 | HOPX |
| SE_02_095300592 | chr4:56674055-56705306 |
Sample_02_0953 | Brain | H3.3K27M_1840 | 592 | 10 | 885 | 85 | 1 | 78 | 90 | HOPX |
| SE_02_151300477 | chr4:56677203-56704730 |
Sample_02_1513 | Lung | Transitional AT2->1 cells | 477 | 6 | 796 | 80 | 1 | 70 | 90 | HOPX |
| SE_02_155100056 | chr4:56684589-56706369 |
Sample_02_1551 | Gastrointestinal Stromal | MaMel | 56 | 6 | 670 | 68 | 0 | 58 | 0 | HOPX |
| SE_02_151400656 | chr4:56695609-56704987 |
Sample_02_1514 | Lung | Differentiated AT1-like cells | 656 | 2 | 263 | 22 | 0 | 23 | 0 | HOPX |
| SE_03_000300241 | chr4:56722763-56769787 |
Sample_03_0003 | Foreskin | foreskin-keratinocyte-calcium5.5day | 241 | 5 | 1387 | 49 | 2 | 41 | 0 | HOPX |
| SE_00_003100396 | chr4:56731070-56761850 |
Sample_00_0031 | Placenta | placenta | 396 | 7 | 908 | 27 | 2 | 27 | 0 | HOPX |
Genomic distribution of SEs associated with HOPX