Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000046653 |
| Gene: | GPM6B | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chrX:13770939-13938638 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_01_008800646 | chrX:13762424-13818013 |
Sample_01_0088 | Tibial nerve | tibial-nerve | 646 | 8 | 1219 | 53 | 0 | 356 | 1014 | OFD1,GPM6B,TRAPPC2 |
| SE_02_003800585 | chrX:13799783-13805029 |
Sample_02_0038 | Embryo | DE | 585 | 1 | 114 | 5 | 0 | 11 | 0 | GPM6B |
| SE_02_004300858 | chrX:13800441-13805005 |
Sample_02_0043 | Embryo endodermal | CyT49_ES_D2 | 858 | 2 | 100 | 3 | 0 | 11 | 0 | GPM6B |
| SE_01_002100713 | chrX:13807836-13818070 |
Sample_01_0021 | Skin | bipolar-neuron | 713 | 2 | 236 | 11 | 0 | 89 | 159 | GPM6B |
| SE_02_053001062 | chrX:13821969-13852709 |
Sample_02_0530 | Mammary gland | MCF10A | 1062 | 8 | 732 | 34 | 2 | 48 | 0 | GPM6B |
| SE_02_119400466 | chrX:13825079-13910679 |
Sample_02_1194 | Brain | GBM28 | 466 | 32 | 1795 | 101 | 2 | 215 | 0 | GPM6B |
| SE_02_121300281 | chrX:13825265-13941561 |
Sample_02_1213 | Brain | GBM31 | 281 | 43 | 2412 | 150 | 4 | 346 | 221 | GPM6B |
| SE_02_117300401 | chrX:13825445-13941358 |
Sample_02_1173 | Brain | GBM01 | 401 | 53 | 2403 | 150 | 4 | 343 | 221 | GPM6B |
| SE_02_118700652 | chrX:13825630-13910586 |
Sample_02_1187 | Brain | GBM16 | 652 | 32 | 1786 | 101 | 2 | 211 | 0 | GPM6B |
| SE_02_028000149 | chrX:13826558-13912434 |
Sample_02_0280 | Mammary gland | SUM159_DMSO_24h | 149 | 10 | 1797 | 103 | 2 | 212 | 0 | GPM6B |
| SE_02_119701018 | chrX:13827056-13910610 |
Sample_02_1197 | Brain | GBM33 | 1018 | 33 | 1764 | 101 | 2 | 209 | 0 | GPM6B |
| SE_02_085700567 | chrX:13832899-13916586 |
Sample_02_0857 | Glioblastoma | Glioblastoma neurosphere cell_HF-3035 | 567 | 20 | 1745 | 103 | 3 | 215 | 0 | GPM6B |
| SE_02_141000382 | chrX:13833821-13916285 |
Sample_02_1410 | Brain | GSC6 | 382 | 22 | 1718 | 102 | 3 | 213 | 0 | GPM6B |
| SE_02_079300155 | chrX:13836762-13877546 |
Sample_02_0793 | Brain | MES20 | 155 | 8 | 977 | 59 | 1 | 110 | 0 | GPM6B |
| SE_02_120300525 | chrX:13852920-13918377 |
Sample_02_1203 | Brain | NB1 | 525 | 29 | 1280 | 79 | 1 | 188 | 0 | GPM6B |
| SE_02_117900242 | chrX:13853266-13911605 |
Sample_02_1179 | Brain | GBM08 | 242 | 18 | 1152 | 69 | 0 | 173 | 0 | GPM6B |
| SE_02_118100403 | chrX:13853324-13916776 |
Sample_02_1181 | Brain | GBM10 | 403 | 27 | 1248 | 77 | 1 | 183 | 0 | GPM6B |
| SE_00_003800569 | chrX:13853532-13907065 |
Sample_00_0038 | Spinal cord | spinal-cord_108d | 569 | 7 | 1086 | 65 | 0 | 165 | 0 | GPM6B |
| SE_02_119800424 | chrX:13853566-13917223 |
Sample_02_1198 | Brain | GBM34 | 424 | 29 | 1248 | 76 | 1 | 183 | 0 | GPM6B |
| SE_02_003600760 | chrX:13853616-13907103 |
Sample_02_0036 | Embryo | H7 | 760 | 14 | 1083 | 65 | 0 | 165 | 0 | GPM6B |
| SE_02_118900365 | chrX:13853697-13910893 |
Sample_02_1189 | Brain | GBM22 | 365 | 20 | 1129 | 67 | 0 | 173 | 0 | GPM6B |
| SE_02_080000329 | chrX:13853706-13910984 |
Sample_02_0800 | Brain | 3679 | 329 | 18 | 1129 | 67 | 0 | 173 | 0 | GPM6B |
| SE_02_121200729 | chrX:13853723-13910680 |
Sample_02_1212 | Brain | GBM30 | 729 | 14 | 1125 | 67 | 0 | 173 | 0 | GPM6B |
| SE_02_121100375 | chrX:13853776-13910673 |
Sample_02_1211 | Brain | GBM21 | 375 | 29 | 1123 | 67 | 0 | 173 | 0 | GPM6B |
| SE_02_117600195 | chrX:13853787-13910890 |
Sample_02_1176 | Brain | GBM04 | 195 | 20 | 1126 | 67 | 0 | 173 | 0 | GPM6B |
| SE_02_096900181 | chrX:13853796-13916663 |
Sample_02_0969 | Brain | H3.3K27M_PL637 | 181 | 19 | 1231 | 75 | 1 | 183 | 0 | GPM6B |
| SE_02_120400416 | chrX:13853828-13917393 |
Sample_02_1204 | Brain | NB2 | 416 | 25 | 1237 | 76 | 1 | 184 | 0 | GPM6B |
| SE_02_097000304 | chrX:13853847-13912356 |
Sample_02_0970 | Brain | H3.3K27M_XHSJ019-X1-1-Rx_xenograft | 304 | 19 | 1145 | 68 | 0 | 175 | 0 | GPM6B |
| SE_02_085400776 | chrX:13853999-13907130 |
Sample_02_0854 | Glioblastoma | Glioblastoma neurosphere cell_HF-2354 | 776 | 11 | 1071 | 63 | 0 | 165 | 0 | GPM6B |
| SE_02_097800137 | chrX:13855848-13907266 |
Sample_02_0978 | Brain | 2168_IDH1 | 137 | 19 | 1028 | 59 | 0 | 160 | 0 | GPM6B |
| SE_02_130700058 | chrX:13862002-13910963 |
Sample_02_1307 | Brain | Glioblastoma patient derived cancer stem cell | 58 | 21 | 940 | 58 | 0 | 157 | 0 | GPM6B |
| SE_02_097600388 | chrX:13862263-13907601 |
Sample_02_0976 | Brain | H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac | 388 | 18 | 892 | 55 | 0 | 149 | 0 | GPM6B |
| SE_02_080200205 | chrX:13862422-13907266 |
Sample_02_0802 | Brain | 3094 | 205 | 10 | 881 | 55 | 0 | 149 | 0 | GPM6B |
| SE_02_094400111 | chrX:13862711-13907227 |
Sample_02_0944 | Brain | TS576 | 111 | 12 | 877 | 55 | 0 | 149 | 0 | GPM6B |
| SE_02_085800764 | chrX:13862930-13907581 |
Sample_02_0858 | Glioblastoma | Glioblastoma neurosphere cell_HF-3177 | 764 | 8 | 880 | 55 | 0 | 149 | 0 | GPM6B |
| SE_01_008800841 | chrX:13863225-13908289 |
Sample_01_0088 | Tibial nerve | tibial-nerve | 841 | 4 | 877 | 55 | 0 | 148 | 0 | GPM6B |
| SE_02_096200688 | chrX:13864168-13910543 |
Sample_02_0962 | Brain | H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells | 688 | 15 | 884 | 56 | 0 | 143 | 0 | GPM6B |
Genomic distribution of SEs associated with GPM6B