SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000139433
Gene: GLTP Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:109850945-109880541 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_120100309 chr12:109811779-109842655 Sample_02_1201 Brain GBM37 309 11 788 72 2 74 364 TRPV4,MIR4497,GLTP,FAM222A-AS1
SE_02_081901036 chr12:109816843-109841321 Sample_02_0819 Ovary Mucinous ovarian cancer 1036 9 624 55 2 44 166 TRPV4,MIR4497,GLTP,FAM222A-AS1
SE_02_057100580 chr12:109818373-109841383 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 580 14 590 54 2 41 166 TRPV4,MIR4497,GLTP,FAM222A-AS1
SE_02_018000628 chr12:109818438-109845929 Sample_02_0180 melanoma CJM 628 10 702 67 2 42 166 TRPV4,GLTP,MGC14436
SE_02_066000694 chr12:109818495-109845764 Sample_02_0660 Mammary gland MCF10DCIS 694 7 696 66 2 42 166 TRPV4,MIR4497,GLTP,FAM222A-AS1
SE_02_057000326 chr12:109818644-109841417 Sample_02_0570 Brain LN229_10_mM_glucose 326 21 584 52 2 41 166 TRPV4,MIR4497,GLTP,FAM222A-AS1
SE_02_042300645 chr12:109818692-109841604 Sample_02_0423 Skin A375 645 9 586 52 2 41 166 TRPV4,GLTP,MGC14436
SE_02_006800446 chr12:109818725-109845915 Sample_02_0068 Skin A375_DMSO 446 8 696 65 2 42 166 TRPV4,GLTP,MGC14436
SE_02_094200219 chr12:109818740-109838923 Sample_02_0942 Brain LN229 219 5 528 41 1 33 166 TRPV4,MIR4497,GLTP,FAM222A-AS1
SE_03_000300312 chr12:109880520-109890413 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 312 3 236 14 0 16 54 TRPV4,TCHP,GLTP
SE_02_073900837 chr12:109886448-109894437 Sample_02_0739 Blood Nalm6 837 1 192 16 0 6 0 GLTP,TCHP
SE_02_122801135 chr12:109886471-109891041 Sample_02_1228 Mammary gland MDA-MB-231_2 1135 3 114 8 0 6 0 GLTP,TCHP
SE_02_093900485 chr12:109887093-109890480 Sample_02_0939 Mammary gland MDA-MB-231_control 485 2 82 5 0 6 0 GLTP,TCHP
SE_02_104601640 chr12:109887576-109931769 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1640 16 1217 109 4 54 1435 TCHP,GIT2,GLTP
SE_02_104801405 chr12:109906883-109931751 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1405 8 742 50 2 37 1017 TCHP,GIT2,GLTP
SE_01_010100927 chr12:109914025-109954699 Sample_01_0101 Pancreas pancreas_54y 927 6 1056 73 5 77 1422 GIT2,TCHP,GLTP,ANKRD13A
SE_02_088800994 chr12:109928463-109965086 Sample_02_0888 Heart left ventricle_LV1160 994 13 839 61 5 86 1151 GIT2,GLTP,ANKRD13A,TCHP
SE_02_145500660 chr12:109929613-109964343 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 660 8 790 58 5 86 1151 GIT2,GLTP,ANKRD13A,TCHP
SE_02_145200754 chr12:109929684-109956615 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 754 6 622 47 4 66 1027 GIT2,GLTP,ANKRD13A,TCHP
Genomic distribution of SEs associated with GLTP
Genome Browser

The strength of the tissue affected by the gene

Expression of GLTP

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)