SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000178950
Gene: GAK Gene type: protein_coding
Strand: - External links:
Genomic region: chr4:849276-932373 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700734 chr4:945760-984812 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 734 19 1562 139 7 152 4208 TMEM175,SLC26A1,DGKQ,GAK,FGFRL1,IDUA
SE_02_021600324 chr4:946347-981750 Sample_02_0216 Skin NHEK_scramble 324 7 1431 130 6 152 4208 TMEM175,DGKQ,SLC26A1,IDUA,FGFRL1,GAK
SE_02_010600364 chr4:946683-968637 Sample_02_0106 Skin NHEK_M 364 5 968 86 4 132 3638 TMEM175,DGKQ,IDUA,SLC26A1,FGFRL1,GAK
SE_02_104601125 chr4:946811-982670 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1125 11 1456 129 6 152 4208 TMEM175,SLC26A1,DGKQ,GAK,FGFRL1,IDUA
SE_02_133400240 chr4:951866-979715 Sample_02_1334 Lung NCI-H1299_mutSMARCA4 240 7 1126 101 4 150 3602 TMEM175,SLC26A1,DGKQ,GAK,FGFRL1,IDUA
SE_02_003200988 chr4:971792-1009639 Sample_02_0032 Pancreas pancreatic-islets-M 988 8 1461 136 7 115 2924 DGKQ,SLC26A1,IDUA,TMEM175,FGFRL1,GAK
SE_02_087400253 chr4:975546-1005400 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 253 8 1208 109 5 105 2677 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175
SE_02_103300165 chr4:978104-1009652 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 165 4 1237 108 6 105 2677 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_054500687 chr4:978698-1009691 Sample_02_0545 Bone marrow K562 WT 687 7 1223 107 6 105 2677 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_111600222 chr4:979159-1009665 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 222 6 1210 107 6 105 2661 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_098700320 chr4:979237-1009677 Sample_02_0987 Blood K562_Control_1 320 6 1207 107 6 105 2654 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_098800560 chr4:979312-1009698 Sample_02_0988 Blood K562_EPZ 560 7 1203 106 6 105 2637 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_04_000200311 chr4:979352-1010408 Sample_04_0002 Blood cold shocked K562 311 4 1220 108 6 105 2629 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_109300635 chr4:979542-1009645 Sample_02_1093 Mammary gland T47D_shCtrl_shRING1B_24hr 635 6 1195 106 6 105 2600 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175
SE_02_113000717 chr4:980006-1009713 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 717 5 1179 106 6 105 2565 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_109900415 chr4:980272-1009671 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 415 6 1173 106 6 105 2565 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_054600178 chr4:980729-1009683 Sample_02_0546 Bone marrow K562_MYO1D Non-hub KO 178 4 1160 106 6 105 2565 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175,ATP5I,MYL5
SE_02_080800629 chr4:982168-998585 Sample_02_0808 Ovary RMG1_ARID1A KO 629 4 653 51 2 63 1401 SLC26A1,IDUA,GAK,FGFRL1,DGKQ,TMEM175
Genomic distribution of SEs associated with GAK
Genome Browser

The strength of the tissue affected by the gene

Expression of GAK

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)