Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000053254 |
| Gene: | FOXN3 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr14:89124871-89619149 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_122200119 | chr14:89417237-89445549 |
Sample_02_1222 | Bone marrow | KMS12 | 119 | 6 | 841 | 30 | 4 | 92 | 351 | FOXN3,FOXN3-AS1 |
| SE_02_129200325 | chr14:89419925-89431618 |
Sample_02_1292 | Lung | JHU-LX110-SCLC PDX | 325 | 6 | 335 | 18 | 1 | 60 | 12 | FOXN3,FOXN3-AS1 |
| SE_02_104601817 | chr14:89419935-89510695 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 1817 | 18 | 2738 | 48 | 7 | 294 | 60 | FOXN3,FOXN3-AS1 |
| SE_02_117200286 | chr14:89422166-89445772 |
Sample_02_1172 | Embryo | H9 WT | 286 | 11 | 713 | 21 | 4 | 70 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_010800386 | chr14:89422390-89446291 |
Sample_02_0108 | Fallopian tube | FT246 | 386 | 4 | 726 | 21 | 4 | 69 | 0 | FOXN3,LOC400236 |
| SE_02_116100042 | chr14:89422808-89467226 |
Sample_02_1161 | Embryo | H1_shZNF587 | 42 | 13 | 1427 | 37 | 5 | 97 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_076300624 | chr14:89422936-89445729 |
Sample_02_0763 | Podocyte | podocyte_DEX | 624 | 4 | 699 | 21 | 4 | 67 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_101600612 | chr14:89423754-89467287 |
Sample_02_1016 | Embryo | H9_Mesendoderm_24h | 612 | 8 | 1405 | 33 | 5 | 89 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_156700295 | chr14:89423765-89445602 |
Sample_02_1567 | iPSCs | CiPSC | 295 | 6 | 671 | 16 | 4 | 60 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_086100520 | chr14:89423789-89443002 |
Sample_02_0861 | iPSCs | SAH_WT | 520 | 6 | 609 | 16 | 4 | 53 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_061001504 | chr14:89423968-89445948 |
Sample_02_0610 | Liposarcoma | MLS 1765-92 | 1504 | 5 | 679 | 17 | 4 | 60 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_067900186 | chr14:89424063-89445457 |
Sample_02_0679 | Embryo | H1 hESC-derived neural progenitor cells_Smad_24hr | 186 | 11 | 661 | 16 | 4 | 55 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_124100574 | chr14:89424316-89445345 |
Sample_02_1241 | Skin | MCC26_virus_negative | 574 | 6 | 653 | 16 | 4 | 49 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_114900415 | chr14:89424596-89445875 |
Sample_02_1149 | Kidney | WT 9-12_control_Nrf2_SFN | 415 | 4 | 662 | 16 | 4 | 56 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_122300336 | chr14:89425065-89432796 |
Sample_02_1223 | Bone marrow | KMS28BM | 336 | 3 | 246 | 11 | 1 | 48 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_122700771 | chr14:89425149-89436940 |
Sample_02_1227 | Bone marrow | U266 | 771 | 9 | 383 | 13 | 3 | 49 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_074100742 | chr14:89425328-89431352 |
Sample_02_0741 | Muscle | RH30 | 742 | 5 | 182 | 8 | 1 | 44 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_126200572 | chr14:89425423-89445815 |
Sample_02_1262 | Bone | Im-GCT-3504_G34W | 572 | 7 | 635 | 15 | 4 | 56 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_121700215 | chr14:89425816-89431600 |
Sample_02_1217 | Blood | Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation | 215 | 3 | 172 | 8 | 1 | 44 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_073900691 | chr14:89426547-89447675 |
Sample_02_0739 | Blood | Nalm6 | 691 | 8 | 669 | 13 | 4 | 57 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_116000421 | chr14:89426753-89445802 |
Sample_02_1160 | Embryo | H1_shLuc | 421 | 9 | 587 | 13 | 4 | 56 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_055900514 | chr14:89426852-89445950 |
Sample_02_0559 | iPSCs | FX52 iPSCs dC-T | 514 | 5 | 589 | 13 | 4 | 56 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_121600390 | chr14:89427404-89431520 |
Sample_02_1216 | Blood | Jurkat ZBTB1 KO | 390 | 1 | 114 | 4 | 1 | 44 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_121500284 | chr14:89427550-89431390 |
Sample_02_1215 | Blood | Jurkat ZBTB1 KO_Asparagine deprivation | 284 | 1 | 112 | 4 | 1 | 44 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_121400249 | chr14:89427662-89431495 |
Sample_02_1214 | Blood | Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1 | 249 | 1 | 109 | 4 | 1 | 44 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_056000410 | chr14:89428528-89443742 |
Sample_02_0560 | iPSCs | FX52_Cas9-inactive Tet1_CGG sgRNA | 410 | 5 | 486 | 10 | 4 | 49 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_133000507 | chr14:89428578-89488517 |
Sample_02_1330 | Blood | AMU-AML1 | 507 | 15 | 1868 | 29 | 5 | 146 | 52 | FOXN3,FOXN3-AS1 |
| SE_02_074200450 | chr14:89428601-89453330 |
Sample_02_0742 | Embryo | ESCs_day0 | 450 | 7 | 779 | 12 | 3 | 72 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_067600218 | chr14:89428720-89446049 |
Sample_02_0676 | Embryo | H1 hESC-derived neural progenitor cells_Smad_3hr | 218 | 11 | 549 | 10 | 3 | 56 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_067500124 | chr14:89428766-89459499 |
Sample_02_0675 | Embryo | H1 hESC-derived neural progenitor cells_Smad_0hr | 124 | 11 | 962 | 21 | 4 | 85 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_010300290 | chr14:89428986-89488168 |
Sample_02_0103 | Peripheral blood | Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 | 290 | 9 | 1845 | 29 | 5 | 146 | 52 | FOXN3,LOC400236 |
| SE_02_139300679 | chr14:89429059-89447509 |
Sample_02_1393 | Lymph node | anaplastic large cell lymphoma cells_ALK+#54 | 679 | 5 | 597 | 10 | 3 | 56 | 0 | FOXN3,FOXN3-AS1 |
| SE_02_131600356 | chr14:89429685-89490100 |
Sample_02_1316 | Brain | hMGLs_TREM2-R47H | 356 | 15 | 1889 | 29 | 5 | 153 | 52 | FOXN3,FOXN3-AS1 |
| SE_02_004200427 | chr14:89438809-89444085 |
Sample_02_0042 | Embryo endodermal | CyT49_ES_D0 | 427 | 1 | 159 | 1 | 1 | 0 | 0 | FOXN3,LOC400236 |
| SE_00_001300267 | chr14:89439978-89443833 |
Sample_00_0013 | Embryo | H9 | 267 | 3 | 116 | 1 | 1 | 0 | 0 | FOXN3,LOC400236 |
| SE_02_010400436 | chr14:89444993-89487961 |
Sample_02_0104 | Blood | neutrophils | 436 | 10 | 1337 | 20 | 2 | 97 | 52 | FOXN3,LOC400236 |
| SE_02_061400496 | chr14:89458020-89492617 |
Sample_02_0614 | Liposarcoma | MLPS_T2 | 496 | 15 | 1075 | 14 | 2 | 88 | 52 | FOXN3,FOXN3-AS1 |
| SE_02_109800770 | chr14:89459322-89488445 |
Sample_02_1098 | Blood | THP1_DMSO_noPMA | 770 | 8 | 903 | 8 | 1 | 61 | 52 | FOXN3,FOXN3-AS1 |
| SE_00_004900816 | chr14:89641492-89681915 |
Sample_00_0049 | Small intestine | small intestine 30y | 816 | 18 | 1038 | 27 | 4 | 128 | 0 | FOXN3,RP11-944C7.1 |
Genomic distribution of SEs associated with FOXN3