Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000127084 |
| Gene: | FGD3 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr9:92947523-93036236 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_104301327 | chr9:92874346-92921102 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 1327 | 20 | 1323 | 186 | 4 | 0 | 460 | LOC642943,ZNF484,FGD3 |
| SE_02_104801620 | chr9:92874368-92921601 |
Sample_02_1048 | Peripheral blood | CD4+ cell_UNTREATED | 1620 | 12 | 1342 | 186 | 4 | 0 | 460 | LOC642943,ZNF484,FGD3 |
| SE_02_044100842 | chr9:92940315-92955116 |
Sample_02_0441 | Bone | M112 | 842 | 4 | 427 | 37 | 1 | 35 | 185 | FGD3 |
| SE_02_043900693 | chr9:92940855-92957867 |
Sample_02_0439 | Bone | Hu09 | 693 | 8 | 501 | 42 | 1 | 35 | 185 | FGD3 |
| SE_02_128300316 | chr9:92946969-92956004 |
Sample_02_1283 | Lung | NCI-H2107_p8-15 | 316 | 3 | 271 | 26 | 0 | 25 | 185 | FGD3 |
| SE_02_068600405 | chr9:92949469-92956533 |
Sample_02_0686 | Lung | NCI-H128_no infection | 405 | 2 | 223 | 20 | 0 | 19 | 0 | FGD3 |
| SE_02_104400087 | chr9:92949559-92969813 |
Sample_02_1044 | Peripheral blood | CD4+ cells_CTCL409 | 87 | 11 | 596 | 58 | 0 | 35 | 124 | FGD3,LOC101927954 |
| SE_02_104000204 | chr9:92949654-92971444 |
Sample_02_1040 | Peripheral blood | CD4+ cells_CTCL1126 | 204 | 11 | 640 | 62 | 0 | 35 | 124 | FGD3,LOC101927954 |
| SE_02_129200507 | chr9:92950665-92957137 |
Sample_02_1292 | Lung | JHU-LX110-SCLC PDX | 507 | 4 | 208 | 21 | 0 | 19 | 0 | FGD3 |
| SE_02_104500272 | chr9:92950912-92970083 |
Sample_02_1045 | Peripheral blood | CD4+ CD7- cells_CTCL992 | 272 | 13 | 561 | 54 | 0 | 35 | 124 | FGD3,LOC101927954 |
| SE_02_012700600 | chr9:92952703-92971839 |
Sample_02_0127 | Blood | Induced-regulatory-T-cells_CPI-703 | 600 | 3 | 566 | 53 | 0 | 35 | 124 | FGD3 |
| SE_02_045500630 | chr9:92952865-92968736 |
Sample_02_0455 | Th17 lymphocytes | Th17-IL-10+ Day 5 | 630 | 4 | 466 | 47 | 0 | 33 | 124 | FGD3,LOC101927954 |
| SE_02_002600203 | chr9:92953241-92971592 |
Sample_02_0026 | Blood | CD4donorE | 203 | 10 | 544 | 53 | 0 | 27 | 124 | FGD3 |
| SE_00_002700896 | chr9:92953278-92973225 |
Sample_00_0027 | Blood | natural-killer-cell | 896 | 3 | 571 | 54 | 0 | 27 | 124 | FGD3 |
| SE_02_014800318 | chr9:92953390-92969908 |
Sample_02_0148 | Blood | CD8_T_cells | 318 | 4 | 480 | 49 | 0 | 24 | 124 | FGD3 |
| SE_02_002300224 | chr9:92953465-92970239 |
Sample_02_0023 | Blood | CD8donorC | 224 | 12 | 491 | 49 | 0 | 23 | 124 | FGD3 |
| SE_02_059200176 | chr9:92953577-92970223 |
Sample_02_0592 | PBMCs | adult CD4+CD25hiCD127lo regulatory T cells | 176 | 8 | 486 | 47 | 0 | 23 | 124 | FGD3,LOC101927954 |
| SE_02_014700086 | chr9:92954480-92965578 |
Sample_02_0147 | Blood | CD4_T_cells | 86 | 3 | 328 | 31 | 0 | 10 | 124 | FGD3 |
| SE_02_153100671 | chr9:92959393-92971849 |
Sample_02_1531 | Peripheral blood | neutrophils_0B9ZK | 671 | 4 | 358 | 32 | 0 | 16 | 124 | FGD3,LOC101927954 |
| SE_02_104900313 | chr9:92960182-92970333 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 313 | 1 | 288 | 27 | 0 | 16 | 124 | FGD3,LOC101927954 |
| SE_02_104100222 | chr9:92960635-92970137 |
Sample_02_1041 | Peripheral blood | CD4+ cells_CTCL1135 | 222 | 9 | 271 | 26 | 0 | 16 | 124 | FGD3,LOC101927954 |
| SE_00_003901179 | chr9:92961258-92968621 |
Sample_00_0039 | Spleen | spleen_3y | 1179 | 2 | 213 | 20 | 0 | 14 | 124 | FGD3 |
| SE_02_104301336 | chr9:92963325-92966858 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 1336 | 1 | 107 | 11 | 0 | 14 | 124 | FGD3,LOC101927954 |
| SE_02_104700389 | chr9:92964534-92966902 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 389 | 1 | 83 | 11 | 0 | 7 | 0 | FGD3,LOC101927954 |
| SE_01_009500697 | chr9:92969227-92971567 |
Sample_01_0095 | Embryo | neuroepithelial stem cell stably expressing HES5 originated from H9 | 697 | 1 | 76 | 6 | 0 | 0 | 0 | FGD3,LOC101927954 |
Genomic distribution of SEs associated with FGD3