SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000116663
Gene: FBXO6 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:11664200-11674354 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_021601202 chr1:11593195-11620902 Sample_02_0216 Skin NHEK_scramble 1202 4 842 31 2 67 0 FBXO44,FBXO6,FBXO2
SE_02_148000444 chr1:11622419-11651695 Sample_02_1480 Bone MHH-ES-1 444 5 892 48 1 133 630 FBXO2,MAD2L2,FBXO44,LOC101929181,DRAXIN,FBXO6
SE_02_116000299 chr1:11677015-11692633 Sample_02_1160 Embryo H1_shLuc 299 4 431 38 0 75 843 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_101500369 chr1:11677106-11707228 Sample_02_1015 Embryo H9_ Undifferentiated 369 10 844 64 0 107 1033 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_012500120 chr1:11679785-11692973 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 120 2 349 29 0 70 710 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_02_147500385 chr1:11679800-11734103 Sample_02_1475 Bone CHLA-25 385 14 1566 109 1 146 2155 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_085700387 chr1:11679933-11707818 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 387 5 776 56 0 102 921 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_004200032 chr1:11680000-11692928 Sample_02_0042 Embryo endodermal CyT49_ES_D0 32 2 345 29 0 69 710 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_02_157200111 chr1:11680135-11732262 Sample_02_1572 iPSCs FiPSC 111 15 1512 106 1 146 2155 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_036300467 chr1:11680153-11693796 Sample_02_0363 Haematopoietic and lymphoid tissue 697 467 2 364 29 0 70 710 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_00_001800283 chr1:11680169-11691776 Sample_00_0018 Dermal fibroblasts iPS-18axian 283 2 320 27 0 59 613 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_00_001600047 chr1:11680181-11693022 Sample_00_0016 Foreskin iPS-DF-19.11 52 2 342 28 0 70 705 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_00_001900190 chr1:11680187-11692445 Sample_00_0019 Dermal fibroblasts iPS-20b 190 2 332 28 0 68 704 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_00_001200128 chr1:11680193-11692399 Sample_00_0012 Embryo H1-hESC 128 3 331 28 0 68 703 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_02_003600200 chr1:11680197-11732354 Sample_02_0036 Embryo H7 200 13 1514 106 1 146 2147 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_02_157000251 chr1:11680202-11732177 Sample_02_1570 iPSCs EiPSC 251 14 1509 106 1 146 2147 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_001700095 chr1:11680208-11708371 Sample_02_0017 Embryo H9_ESC 95 6 792 56 0 102 913 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_02_156700228 chr1:11680273-11732264 Sample_02_1567 iPSCs CiPSC 228 12 1511 106 1 146 2133 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_121200203 chr1:11680283-11705866 Sample_02_1212 Brain GBM30 203 8 701 51 0 91 687 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_01_003300457 chr1:11680287-11691945 Sample_01_0033 Embryo H9 457 2 323 27 0 66 657 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_02_117200261 chr1:11680291-11692468 Sample_02_1172 Embryo H9 WT 261 2 331 28 0 68 685 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_006400920 chr1:11680322-11691337 Sample_02_0064 Embryo DN-Early_G1 920 3 308 26 0 48 448 MAD2L2,FBXO44,FBXO2,C1ORF187,FBXO6,AGTRAP
SE_02_141001227 chr1:11680423-11702478 Sample_02_1410 Brain GSC6 1227 3 593 46 0 78 663 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_01_002100855 chr1:11680431-11715874 Sample_01_0021 Skin bipolar-neuron 855 4 1027 74 0 122 1279 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_01_003100109 chr1:11680464-11690701 Sample_01_0031 Skin GM23338 109 2 279 24 0 24 395 MAD2L2,FBXO44,FBXO2,C1ORF187,FBXO6,AGTRAP
SE_00_001300183 chr1:11681619-11691157 Sample_00_0013 Embryo H9 183 3 246 22 0 16 93 MAD2L2,FBXO44,FBXO2,C1ORF187,FBXO6,AGTRAP
SE_02_086100508 chr1:11682713-11689509 Sample_02_0861 iPSCs SAH_WT 508 3 170 15 0 6 0 MAD2L2,AGTRAP,FBXO44,DRAXIN,FBXO6,FBXO2
SE_02_116100338 chr1:11682845-11701850 Sample_02_1161 Embryo H1_shZNF587 338 3 492 38 0 51 258 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_067500051 chr1:11682875-11732082 Sample_02_0675 Embryo H1 hESC-derived neural progenitor cells_Smad_0hr 51 13 1422 99 1 116 1703 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2,NPPB,C1orf167,C1ORF187
SE_02_138500307 chr1:11687919-11693531 Sample_02_1385 Other iPSCs 307 1 148 8 0 34 258 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_067900236 chr1:11688140-11705615 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 236 6 490 31 0 55 258 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2,C1ORF187
SE_02_068600544 chr1:11688967-11691991 Sample_02_0686 Lung NCI-H128_no infection 544 2 89 7 0 30 245 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_096200406 chr1:11689432-11734160 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 406 11 1307 86 1 110 1703 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2
SE_00_001001272 chr1:11689688-11692355 Sample_00_0010 Embryo endodermal-cell 1272 1 74 6 0 32 258 C1ORF187,MAD2L2,FBXO44,FBXO2,FBXO6,AGTRAP
SE_02_119300493 chr1:11689690-11733023 Sample_02_1193 Brain GBM27 493 7 1271 84 1 110 1703 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_117900331 chr1:11689894-11733015 Sample_02_1179 Brain GBM08 331 10 1265 83 1 110 1703 DRAXIN,MAD2L2,C1ORF167,LOC102724659,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_097800493 chr1:11690461-11704526 Sample_02_0978 Brain 2168_IDH1 493 4 393 26 0 48 258 DRAXIN,MAD2L2,AGTRAP,FBXO44,FBXO6,FBXO2
SE_02_039600662 chr1:11693292-11804344 Sample_02_0396 Skin NHEK-D 662 26 3439 426 47 215 6012 AGTRAP,MTHFR,C1ORF187,NPPA,FBXO44,FBXO2,CLCN6,FBXO6,MAD2L2
SE_02_067400915 chr1:11693395-11739131 Sample_02_0674 Endometrium E1_FA 915 13 1337 89 1 93 1582 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO44,FBXO6,FBXO2
SE_02_096700526 chr1:11693700-11741323 Sample_02_0967 Brain H3.3K27M_JN57 526 8 1384 98 1 93 1582 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO44,FBXO6,FBXO2
SE_02_098800487 chr1:11693856-11753871 Sample_02_0988 Blood K562_EPZ 487 10 1806 139 2 105 2184 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO44,FBXO6,FBXO2,CLCN6,TARDBP,MTHFR,C1orf167
SE_02_104300811 chr1:11693857-11753631 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 811 17 1797 137 2 105 2184 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO44,FBXO6,FBXO2
SE_02_098700488 chr1:11693893-11753503 Sample_02_0987 Blood K562_Control_1 488 10 1793 137 2 105 2184 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO44,FBXO6,FBXO2,CLCN6,TARDBP,MTHFR,C1orf167
SE_02_103501753 chr1:11706320-11744582 Sample_02_1035 Mammary gland HCC70_Vehicle 1753 13 1126 89 1 72 1533 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO6
SE_02_083700417 chr1:11707498-11749299 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 417 8 1238 93 1 70 1736 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO6
SE_02_083600570 chr1:11707556-11749369 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 570 9 1239 94 1 70 1736 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO6
SE_02_083400579 chr1:11707593-11749313 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 579 11 1236 93 1 70 1736 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO6
SE_02_133000619 chr1:11707624-11744348 Sample_02_1330 Blood AMU-AML1 619 10 1070 85 1 61 1371 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO6
SE_02_104900750 chr1:11711323-11752765 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 750 28 1252 100 2 69 1845 DRAXIN,AGTRAP,C1ORF167,LOC102724659,MAD2L2,FBXO6
Genomic distribution of SEs associated with FBXO6
Genome Browser

The strength of the tissue affected by the gene

Expression of FBXO6

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)