SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: FAM178A Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_026500784 chr10:100871816-100902257 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 784 4 838 87 3 380 0 FAM178A
SE_02_036400022 chr10:100871850-100910956 Sample_02_0364 Skeletal muscle CTR 22 4 1021 101 5 412 0 FAM178A
SE_02_007300430 chr10:100872709-100910324 Sample_02_0073 Other 90-8TL_DMSO 430 9 985 97 4 397 0 FAM178A
SE_02_036900003 chr10:100877735-100910833 Sample_02_0369 Skeletal muscle RD 3 5 845 88 5 287 0 FAM178A
SE_02_037900003 chr10:100877735-100910833 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 3 5 845 88 5 287 0 FAM178A
SE_02_037100025 chr10:100877855-100910801 Sample_02_0371 Skeletal muscle RH5 25 6 844 88 5 287 0 FAM178A
SE_02_036500107 chr10:100877934-100910768 Sample_02_0365 Skeletal muscle NCI0075 107 5 842 88 5 287 0 FAM178A
SE_02_037000030 chr10:100877937-100910969 Sample_02_0370 Skeletal muscle RH4 30 7 844 88 5 293 0 FAM178A
SE_02_037300024 chr10:100878135-100910777 Sample_02_0373 Skeletal muscle RMS206 24 10 840 88 5 287 0 FAM178A
SE_02_021000682 chr10:100878154-100910485 Sample_02_0210 Lung MRC-5_N_1DPT 682 9 831 88 5 287 0 FAM178A
SE_02_037500021 chr10:100879640-100910400 Sample_02_0375 Skeletal muscle RMS216 21 11 784 81 4 281 0 FAM178A
SE_02_037200205 chr10:100881526-100903760 Sample_02_0372 Skeletal muscle RMS008 205 2 596 64 3 219 0 FAM178A
SE_00_002600487 chr10:100881548-100910454 Sample_00_0026 Muscle of trunk muscle-of-trunk 487 5 730 76 5 248 0 FAM178A
SE_02_037800080 chr10:100881594-100910794 Sample_02_0378 Skeletal muscle SCMC 80 5 740 76 5 248 0 FAM178A
SE_02_040600503 chr10:100881757-100891849 Sample_02_0406 Mammary gland ZR-75-30_parental 503 2 310 34 3 181 0 FAM178A
SE_02_037400208 chr10:100882392-100910577 Sample_02_0374 Skeletal muscle RMS209 208 6 709 70 5 220 0 FAM178A
SE_02_037600356 chr10:100883301-100888398 Sample_02_0376 Skeletal muscle RMS237 356 3 173 16 2 65 0 FAM178A
Genomic distribution of SEs associated with FAM178A
Genome Browser

The strength of the tissue affected by the gene

Expression of FAM178A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)