Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000161682
Gene: FAM171A2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:44353215-44363853 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_102900827 chr17:44312395-44329095 Sample_02_1029 Colon HCT116 827 8 492 35 1 141 2077 RUNDC3A,SLC25A39,SLC4A1,FAM171A2,GRN,RUNDC3A-AS1
SE_02_076500417 chr17:44313104-44328922 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 417 9 470 34 1 134 1921 RUNDC3A,SLC25A39,SLC4A1,FAM171A2,GRN,RUNDC3A-AS1
SE_02_146700699 chr17:44314587-44329108 Sample_02_1467 Blood HUDEP-2_LRFKO 699 1 443 34 1 124 1803 RUNDC3A,SLC25A39,SLC4A1,FAM171A2,GRN,RUNDC3A-AS1
SE_02_085200550 chr17:44314730-44328970 Sample_02_0852 Mammary gland MCF7L-P 550 5 432 33 1 123 1762 RUNDC3A,SLC25A39,SLC4A1,FAM171A2,GRN,RUNDC3A-AS1
SE_02_115900551 chr17:44314730-44328970 Sample_02_1159 Mammary gland MCF7 551 5 432 33 1 123 1762 RUNDC3A,SLC25A39,SLC4A1,FAM171A2,GRN,RUNDC3A-AS1
SE_02_064601320 chr17:44314844-44326940 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1320 2 376 31 1 117 1740 RUNDC3A,SLC25A39,SLC4A1,FAM171A2,GRN,RUNDC3A-AS1
SE_02_077400338 chr17:44314934-44327292 Sample_02_0774 Prostate 22Rv1_delSite1_Clone11/12-D8 338 4 387 31 1 120 1715 RUNDC3A,SLC25A39,SLC4A1,FAM171A2,GRN,RUNDC3A-AS1
SE_02_122700490 chr17:44315317-44348853 Sample_02_1227 Bone marrow U266 490 7 940 77 5 127 1742 SLC25A39,RUNDC3A,GRN,SLC4A1,ITGA2B,FAM171A2,RUNDC3A-AS1
SE_02_080800562 chr17:44321348-44348049 Sample_02_0808 Ovary RMG1_ARID1A KO 562 16 736 67 5 67 710 SLC25A39,GRN,ITGA2B,FAM171A2,RUNDC3A,RUNDC3A-AS1
SE_02_158400951 chr17:44323825-44349332 Sample_02_1584 Brain U87 GBM_Mock 951 6 674 54 4 50 329 SLC25A39,GRN,ITGA2B,FAM171A2,RUNDC3A,RUNDC3A-AS1
SE_01_008401299 chr17:44324008-44350407 Sample_01_0084 Spleen spleen 1299 5 711 56 4 59 579 GRN,SLC25A39,RUNDC3A,ITGA2B,FAM171A2
SE_02_122500299 chr17:44324941-44350853 Sample_02_1225 Bone marrow RAJI 299 11 694 53 4 56 548 GRN,ITGA2B,SLC25A39,FAM171A2,RUNDC3A,RUNDC3A-AS1,SLC4A1,UBTF,ATXN7L3,TMUB2
SE_02_082601746 chr17:44327597-44351002 Sample_02_0826 Stomach gastric tumor 1746 9 629 50 4 47 567 GRN,ITGA2B,SLC25A39,FAM171A2,RUNDC3A,RUNDC3A-AS1
SE_02_134500606 chr17:44328150-44349366 Sample_02_1345 Leukophereses leukophereses_p358 606 12 556 46 4 29 194 GRN,ITGA2B,SLC25A39,FAM171A2,RUNDC3A,RUNDC3A-AS1
SE_02_117500740 chr17:44331695-44348614 Sample_02_1175 Brain GBM03 740 10 456 40 4 18 111 GRN,ITGA2B,SLC25A39,FAM171A2,RUNDC3A,RUNDC3A-AS1
SE_02_098801011 chr17:44384602-44394675 Sample_02_0988 Blood K562_EPZ 1011 5 243 9 1 32 551 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_109900693 chr17:44384705-44394568 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 693 4 239 9 1 32 529 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_139100365 chr17:44384812-44468122 Sample_02_1391 Peripheral blood FE-PD_ALK- 365 21 1963 88 5 370 1837 ITGA2B,GPATCH8,GRN,FAM171A2
SE_02_109500578 chr17:44385006-44394644 Sample_02_1095 Blood CD34 Erythroid cells_Don002 578 1 233 8 1 31 449 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_057900335 chr17:44386068-44400777 Sample_02_0579 Blood HEL_sgNeg2 335 6 347 13 3 159 1034 ITGA2B,GPATCH8,GRN,FAM171A2
SE_02_058000376 chr17:44386159-44400839 Sample_02_0580 Blood HEL_sgSIK3e4 376 5 348 13 3 158 1017 ITGA2B,GPATCH8,GRN,FAM171A2
SE_02_057600370 chr17:44386412-44400852 Sample_02_0576 Blood HEL_sgLKB1e2 370 7 343 13 3 157 989 ITGA2B,GPATCH8,GRN,FAM171A2
SE_02_082000407 chr17:44387238-44394678 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 407 1 184 6 2 12 126 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_082200374 chr17:44388043-44394755 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 374 1 161 6 2 11 126 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_082300291 chr17:44388325-44394598 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 291 1 153 5 1 11 126 ITGA2B,GRN,GPATCH8,FAM171A2

Genomic distribution of SEs associated with FAM171A2

The strength of the tissue affected by the gene


Expression of FAM171A2