SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000119915
Gene: ELOVL3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr10:102226299-102229589 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_007600211 chr10:102229659-102348517 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 211 12 2452 192 5 487 1213 PITX3,GBF1,NFKB2,ELOVL3
SE_02_036900319 chr10:102229708-102243335 Sample_02_0369 Skeletal muscle RD 319 2 285 23 1 129 721 PITX3,ELOVL3,GBF1
SE_02_037900319 chr10:102229708-102243335 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 319 2 285 23 1 129 721 PITX3,ELOVL3,GBF1
SE_02_141300014 chr10:102229951-102350004 Sample_02_1413 Muscle RH4_sgBRG1 14 23 2470 194 5 484 1201 GBF1,PITX3,NFKB2,ELOVL3
SE_01_009700376 chr10:102230087-102336472 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 376 25 2203 174 4 443 1114 GBF1,PITX3,ELOVL3
SE_01_009400159 chr10:102230177-102348139 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 159 29 2435 191 4 484 1159 GBF1,PITX3,NFKB2,ELOVL3
SE_02_107800125 chr10:102230194-102291800 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 125 27 1245 96 2 334 1100 GBF1,PITX3,ELOVL3
SE_02_036400556 chr10:102232873-102246733 Sample_02_0364 Skeletal muscle CTR 556 1 295 22 0 85 340 PITX3,GBF1,ELOVL3
SE_02_037000369 chr10:102233322-102245346 Sample_02_0370 Skeletal muscle RH4 369 1 254 17 0 62 150 PITX3,ELOVL3,GBF1
SE_02_074000154 chr10:102233726-102287752 Sample_02_0740 Muscle RH3 154 15 1083 80 0 262 577 GBF1,PITX3,ELOVL3
SE_02_108100279 chr10:102233773-102247608 Sample_02_1081 Muscle CTR shCtrl 279 5 310 20 0 87 438 GBF1,PITX3,ELOVL3
SE_02_021100917 chr10:102248463-102311420 Sample_02_0211 Lung MRC-5_NFD_1DPT 917 8 1250 98 2 201 86 GBF1,ELOVL3,PITX3
SE_02_108000107 chr10:102258331-102347950 Sample_02_1080 Muscle JR1 shCtrl 107 36 1826 141 4 318 144 GBF1,NFKB2,PITX3,ELOVL3
SE_02_037000265 chr10:102260000-102281460 Sample_02_0370 Skeletal muscle RH4 265 2 420 31 0 113 22 GBF1,ELOVL3,PITX3
SE_02_036400086 chr10:102260164-102353044 Sample_02_0364 Skeletal muscle CTR 86 13 1886 144 4 338 322 GBF1,NFKB2,ELOVL3,PITX3
SE_02_074100190 chr10:102260374-102282849 Sample_02_0741 Muscle RH30 190 7 437 33 0 112 0 GBF1,ELOVL3,PITX3
SE_02_084000477 chr10:102260871-102287120 Sample_02_0840 Embryo hNPCs_R1159Q/+ 477 9 494 37 0 145 0 GBF1,ELOVL3,PITX3
SE_01_011501103 chr10:102260994-102310878 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 1103 14 978 75 2 173 0 GBF1,ELOVL3,PITX3,LDB1
SE_02_087600037 chr10:102261002-102347827 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 37 26 1766 139 4 299 58 GBF1,NFKB2,PITX3,ELOVL3
SE_02_108100074 chr10:102261021-102347929 Sample_02_1081 Muscle CTR shCtrl 74 31 1768 139 4 299 58 GBF1,NFKB2,PITX3,ELOVL3
SE_02_036900482 chr10:102261173-102288527 Sample_02_0369 Skeletal muscle RD 482 7 510 40 0 143 0 GBF1,ELOVL3,PITX3
SE_02_037900480 chr10:102261173-102288527 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 480 7 510 40 0 143 0 GBF1,ELOVL3,PITX3
SE_02_074700965 chr10:102261245-102336285 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 965 29 1529 123 4 257 0 GBF1,ELOVL3,PITX3
SE_00_003300255 chr10:102261991-102314090 Sample_00_0033 Psoas muscle psoas-muscle_3y 255 10 1031 74 2 188 0 GBF1,ELOVL3,PITX3
SE_00_002500482 chr10:102262098-102329622 Sample_00_0025 Muscle of leg muscle-of-leg 482 11 1361 110 4 236 0 GBF1,ELOVL3,PITX3
SE_02_090801317 chr10:102262266-102313879 Sample_02_0908 Heart left ventricle_DCM_LV1262 1317 18 1021 74 2 188 0 GBF1,ELOVL3,PITX3
SE_00_002600801 chr10:102262418-102300995 Sample_00_0026 Muscle of trunk muscle-of-trunk 801 6 718 57 2 152 0 GBF1,ELOVL3,PITX3
SE_02_087700092 chr10:102262493-102347821 Sample_02_0877 Muscle SMS-CTR_CASZ1b_Dox 92 24 1730 136 4 297 58 GBF1,NFKB2,PITX3,ELOVL3
SE_02_158300760 chr10:102266295-102313364 Sample_02_1583 Fetal lung IMR90_empty_GM 760 20 923 68 2 140 0 GBF1,ELOVL3,PITX3
SE_02_064801399 chr10:102267262-102286172 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1399 6 344 28 0 63 0 GBF1,ELOVL3,PITX3
SE_02_064901218 chr10:102267341-102285658 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 1218 4 334 28 0 54 0 GBF1,ELOVL3,PITX3
SE_02_076200959 chr10:102267360-102349196 Sample_02_0762 Podocyte podocyte_CTL 959 16 1656 132 4 242 58 GBF1,NFKB2,PITX3,ELOVL3
SE_01_002300221 chr10:102267453-102344037 Sample_01_0023 Embryo cardiac-muscle-cell 221 10 1557 123 4 213 15 GBF1,ELOVL3,PITX3
SE_02_089701003 chr10:102267607-102303295 Sample_02_0897 Heart left ventricle_LV1325 1003 14 678 55 2 97 0 GBF1,ELOVL3,PITX3
SE_02_090100926 chr10:102267674-102316898 Sample_02_0901 Heart left ventricle_LV1471 926 23 983 78 3 149 0 GBF1,ELOVL3,PITX3
SE_02_089800970 chr10:102267743-102316773 Sample_02_0898 Heart left ventricle_LV1356 970 23 980 78 3 149 0 GBF1,ELOVL3,PITX3
SE_02_091100814 chr10:102268307-102313864 Sample_02_0911 Heart left ventricle_DCM_LV1290 814 17 902 68 2 133 0 GBF1,ELOVL3,PITX3
SE_02_091200895 chr10:102268308-102313900 Sample_02_0912 Heart left ventricle_DCM_LV1300 895 19 902 68 2 133 0 GBF1,ELOVL3,PITX3
SE_02_089101179 chr10:102268341-102310663 Sample_02_0891 Heart left ventricle_LV1202 1179 15 820 66 2 103 0 GBF1,ELOVL3,PITX3
SE_02_090700709 chr10:102268417-102335925 Sample_02_0907 Heart left ventricle_DCM_LV1223 709 27 1374 112 4 201 0 GBF1,ELOVL3,PITX3
SE_02_088901522 chr10:102268503-102312924 Sample_02_0889 Heart left ventricle_LV1183 1522 15 874 68 2 120 0 GBF1,ELOVL3,PITX3
SE_02_090501017 chr10:102268996-102311046 Sample_02_0905 Heart left ventricle_DCM_LV1033 1017 12 822 65 2 111 0 GBF1,ELOVL3,PITX3
SE_02_038200503 chr10:102275062-102343491 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 503 10 1382 111 4 203 0 GBF1,ELOVL3,PITX3
SE_02_090401095 chr10:102275315-102313567 Sample_02_0904 Heart left ventricle_DCM_LV1028 1095 21 747 56 2 119 0 GBF1,ELOVL3,PITX3
Genomic distribution of SEs associated with ELOVL3
Genome Browser

The strength of the tissue affected by the gene

Expression of ELOVL3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)