SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000075151
Gene: EIF4G3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:20806292-21176888 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_101700234 chr1:20947604-21154061 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 234 35 4957 358 7 123 456 MIR1256,EIF4G3
SE_02_103501812 chr1:21043678-21129310 Sample_02_1035 Mammary gland HCC70_Vehicle 1812 27 1958 132 3 25 102 EIF4G3
SE_02_103600133 chr1:21053188-21202905 Sample_02_1036 Mammary gland HCC70_XY018 133 83 3622 258 4 156 489 EIF4G3
SE_02_017201021 chr1:21140965-21177902 Sample_02_0172 Lung IMR-90_quiescent 1021 9 960 71 1 101 428 EIF4G3
SE_02_103500381 chr1:21142986-21192264 Sample_02_1035 Mammary gland HCC70_Vehicle 381 23 1280 101 1 126 428 EIF4G3
SE_02_137801372 chr1:21145142-21171673 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1372 12 706 50 1 16 69 EIF4G3
SE_02_142700617 chr1:21145444-21195824 Sample_02_1427 Shoulder fibroblast_343 617 10 1305 101 1 141 428 EIF4G3
SE_02_088600571 chr1:21145992-21201495 Sample_02_0886 Skin foreskin_ p63KLF4 571 9 1448 108 1 141 428 EIF4G3
SE_02_016800458 chr1:21147634-21177453 Sample_02_0168 Prostate LNCaP 458 3 801 59 1 100 428 EIF4G3
SE_02_142800999 chr1:21148147-21177654 Sample_02_1428 Shoulder fibroblast_316 999 4 794 57 1 100 428 EIF4G3
SE_02_046501335 chr1:21149696-21176867 Sample_02_0465 Adipose subcutaneous adipocytes 1335 11 730 53 1 94 378 EIF4G3
SE_02_126100847 chr1:21174863-21177302 Sample_02_1261 Bone Im-GCT-3504_G34W_unedited 847 1 53 2 0 81 327 EIF4G3
SE_02_104700022 chr1:21210914-21371037 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 22 82 4593 332 7 313 3845 ECE1,LOC100506801,EIF4G3
SE_02_103600056 chr1:21216313-21401777 Sample_02_1036 Mammary gland HCC70_XY018 56 83 5249 380 8 313 3845 ECE1,LOC100506801,EIF4G3,NBPF3
SE_02_104900025 chr1:21216353-21369049 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 25 104 4374 316 7 313 3845 ECE1,LOC100506801,EIF4G3
SE_02_039600364 chr1:21216922-21336599 Sample_02_0396 Skin NHEK-D 364 26 3474 247 5 272 3686 ECE1,EIF4G3
SE_02_141600006 chr1:21217314-21345926 Sample_02_1416 Brain SF9402 6 23 3724 260 6 303 3798 ECE1,LOC100506801,EIF4G3
SE_00_005100007 chr1:21217322-21343254 Sample_00_0051 Adrenal gland adrenal gland 30y 7 98 3652 254 6 292 3639 ECE1,LOC100506801,EIF4G3
SE_02_036600002 chr1:21220218-21351006 Sample_02_0366 Skeletal muscle NCI0082 2 11 3758 258 6 283 3151 ECE1,EIF4G3
SE_02_151900001 chr1:21220586-21343137 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 1 80 3553 241 6 267 2975 ECE1,LOC100506801,EIF4G3
SE_02_152000001 chr1:21220753-21343075 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 1 76 3541 241 6 267 2975 ECE1,LOC100506801,EIF4G3
SE_02_157900184 chr1:21220949-21281742 Sample_02_1579 Renal 786-M1A 184 15 1819 105 3 139 2142 ECE1,EIF4G3,LOC100506801
SE_02_086900015 chr1:21223996-21345542 Sample_02_0869 Fibroblast VH10_NO_UV 15 53 3532 244 6 266 2975 ECE1,LOC100506801,EIF4G3
SE_02_088600180 chr1:21226360-21343185 Sample_02_0886 Skin foreskin_ p63KLF4 180 29 3397 233 6 253 2751 ECE1,LOC100506801,EIF4G3
Genomic distribution of SEs associated with EIF4G3
Genome Browser

The strength of the tissue affected by the gene

Expression of EIF4G3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)