SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000249751
Gene: ECSCR Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:139448560-139462743 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_088901350 chr5:139410555-139420892 Sample_02_0889 Heart left ventricle_LV1183 1350 2 197 8 0 32 532 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_092500872 chr5:139410717-139421133 Sample_02_0925 Heart fetal heart_PCW17_12570 872 5 198 6 0 32 512 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_090401290 chr5:139410886-139421160 Sample_02_0904 Heart left ventricle_DCM_LV1028 1290 4 196 7 0 32 495 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_089201343 chr5:139411084-139420828 Sample_02_0892 Heart left ventricle_LV1215 1343 2 187 6 0 32 468 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_074600761 chr5:139411137-139424250 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 761 4 270 9 0 40 510 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_089300679 chr5:139411524-139420734 Sample_02_0893 Heart left ventricle_LV1226 679 2 178 6 0 31 422 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_122300564 chr5:139412590-139418371 Sample_02_1223 Bone marrow KMS28BM 564 1 102 3 0 23 229 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_091101201 chr5:139413758-139420848 Sample_02_0911 Heart left ventricle_DCM_LV1290 1201 1 133 4 0 30 133 DNAJC18,SLC23A1,SPATA24,MZB1,ECSCR,PROB1
SE_02_095000137 chr5:139442226-139498840 Sample_02_0950 Umbilical vein HUVEC_WT 137 19 1202 61 2 58 1504 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_083100202 chr5:139442243-139475248 Sample_02_0831 Umblical vein HUVECs_TNF0min 202 10 603 25 1 35 540 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_058500082 chr5:139442244-139497251 Sample_02_0585 Umbilical vein HUVEC 0hour 82 10 1158 58 2 58 1504 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_084100158 chr5:139442306-139526710 Sample_02_0841 Blood THP-1_untr 158 17 1954 91 2 57 1497 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1,UBE2D2
SE_02_045900430 chr5:139442384-139496268 Sample_02_0459 Blood ME-1_DMSO_6h 430 13 1138 57 2 57 1483 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_083200225 chr5:139442424-139497055 Sample_02_0832 Umblical vein HUVECs_TNF30min 225 13 1153 57 2 57 1476 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_156900416 chr5:139442815-139474302 Sample_02_1569 Endothelial Endothelial cells 416 5 574 24 1 34 476 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_045700781 chr5:139443037-139449320 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 781 1 125 5 0 0 210 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_094900693 chr5:139443103-139474525 Sample_02_0949 Umbilical artery HUAEC_WT 693 12 569 24 1 34 476 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_130100375 chr5:139443225-139483276 Sample_02_1301 Blood PER-117 375 7 806 38 2 50 1440 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_146900577 chr5:139443303-139474307 Sample_02_1469 Umbilical Vein HUVEC 577 5 564 24 1 34 476 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_147100668 chr5:139443432-139474572 Sample_02_1471 Blood Outgrowth Endothelia BOEC 668 4 566 24 1 34 476 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_151800218 chr5:139443448-139475325 Sample_02_1518 Umbilical vein HUVEC_Scr 218 13 586 25 1 34 476 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_104200241 chr5:139443569-139476512 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 241 20 625 25 1 34 681 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_156800504 chr5:139443584-139496919 Sample_02_1568 Heart Cardiac progenitor cells 504 9 1133 57 2 57 1421 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_130901285 chr5:139443620-139474485 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 1285 4 565 24 1 34 449 ECSCR,DNAJC18,TMEM173,SPATA24,PROB1
SE_02_062000063 chr5:139443684-139496648 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 63 14 1128 57 2 57 1399 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1,PAIP2
SE_02_151900181 chr5:139444642-139497171 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 181 18 1124 57 2 57 1355 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_152000200 chr5:139444666-139497169 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 200 12 1124 57 2 57 1355 ECSCR,TMEM173,DNAJC18,SPATA24,PROB1
SE_02_092300834 chr5:139445346-139493575 Sample_02_0923 Heart fetal heart_PCW10_12522 834 9 1030 55 2 57 1355 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_090800931 chr5:139445991-139496251 Sample_02_0908 Heart left ventricle_DCM_LV1262 931 16 1072 56 2 57 1355 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_104300400 chr5:139448100-139518395 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 400 42 1645 79 2 57 1355 ECSCR,TMEM173,DNAJC18,SPATA24,UBE2D2
SE_02_104700297 chr5:139449302-139494215 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 297 24 968 52 2 57 1230 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_134500462 chr5:139452064-139496218 Sample_02_1345 Leukophereses leukophereses_p358 462 15 951 50 2 56 1228 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_061300397 chr5:139452265-139504157 Sample_02_0613 Liposarcoma MLPS_T1 397 14 1165 61 2 56 1228 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_104601286 chr5:139452327-139487489 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1286 21 747 39 2 54 1228 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_122900267 chr5:139452344-139519004 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 267 21 1580 77 2 56 1228 ECSCR,TMEM173,DNAJC18,SPATA24,UBE2D2
SE_02_104400231 chr5:139452408-139475463 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 231 8 423 18 1 33 287 ECSCR,TMEM173,DNAJC18,SPATA24
SE_00_005600859 chr5:139453742-139493198 Sample_00_0056 Sigmoid colon sigmoid colon 3y 859 14 886 48 2 56 1228 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_133000546 chr5:139453988-139501110 Sample_02_1330 Blood AMU-AML1 546 12 1077 57 2 56 1228 ECSCR,TMEM173,DNAJC18,SPATA24
SE_02_104800700 chr5:139454151-139478841 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 700 16 532 24 1 49 770 ECSCR,TMEM173,DNAJC18
SE_02_111200925 chr5:139455171-139479149 Sample_02_1112 T lymphocyte THP-6 T-ALL 925 4 540 24 1 49 770 ECSCR,TMEM173,DNAJC18
SE_02_111900474 chr5:139456546-139495676 Sample_02_1119 Blood KBM7 474 14 943 49 2 56 1228 ECSCR,TMEM173,DNAJC18
SE_02_057601053 chr5:139456593-139496408 Sample_02_0576 Blood HEL_sgLKB1e2 1053 10 955 49 2 56 1228 ECSCR,TMEM173,DNAJC18
SE_02_133100310 chr5:139456966-139496054 Sample_02_1331 Blood Molm13_CTRL 310 11 948 49 2 56 1228 ECSCR,TMEM173,DNAJC18
SE_02_143100859 chr5:139457650-139496924 Sample_02_1431 Blood T cell 859 7 963 49 2 56 1195 ECSCR,TMEM173,DNAJC18
SE_02_139400290 chr5:139457833-139480541 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 290 6 560 24 1 49 698 ECSCR,TMEM173,DNAJC18
SE_02_132200916 chr5:139457966-139475996 Sample_02_1322 Connective Tissue HT1080_WT 916 3 431 17 1 33 293 ECSCR,TMEM173,DNAJC18,UBE2D2,CXXC5
SE_02_058001121 chr5:139457970-139496370 Sample_02_0580 Blood HEL_sgSIK3e4 1121 7 946 49 2 56 1130 ECSCR,TMEM173,DNAJC18
SE_02_132001430 chr5:139457995-139475475 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1430 5 415 17 1 33 189 ECSCR,TMEM173,DNAJC18,UBE2D2,CXXC5
SE_02_083600529 chr5:139457998-139518533 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 529 15 1560 75 2 56 1128 ECSCR,TMEM173,UBE2D2,DNAJC18
SE_02_068200238 chr5:139458093-139501867 Sample_02_0682 Blood Kasumi-1 238 10 1090 57 2 56 1106 ECSCR,TMEM173,DNAJC18
SE_02_083300457 chr5:139458120-139496280 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 457 10 941 49 2 56 1102 ECSCR,TMEM173,DNAJC18
SE_02_109800263 chr5:139458355-139488712 Sample_02_1098 Blood THP1_DMSO_noPMA 263 9 752 42 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_083500454 chr5:139458434-139496261 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 454 7 931 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_083400538 chr5:139458484-139518511 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 538 15 1545 75 2 56 1068 ECSCR,TMEM173,UBE2D2,DNAJC18
SE_02_131500514 chr5:139458493-139504157 Sample_02_1315 Brain hMGLs_INPP5D SNP 514 10 1141 60 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_089600968 chr5:139458518-139496038 Sample_02_0896 Heart left ventricle_LV1294 968 10 924 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_090601152 chr5:139458529-139496291 Sample_02_0906 Heart left ventricle_DCM_LV1072 1152 10 928 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_091500692 chr5:139458530-139488818 Sample_02_0915 Heart left ventricle_DCM_LV1371 692 7 750 42 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_058100652 chr5:139458538-139488861 Sample_02_0581 Blood MOLM13_empty_HG 652 10 750 42 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_099300472 chr5:139458552-139495970 Sample_02_0993 Blood MOLM-13_empty 472 16 920 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_057500879 chr5:139458560-139501847 Sample_02_0575 Blood MOLM13_sgLKB1e2 879 13 1076 57 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_081601076 chr5:139458563-139493133 Sample_02_0816 Ovary Clear cell ovarian cancer 1076 10 855 47 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_01_010400897 chr5:139458564-139495990 Sample_01_0104 Lung upper lobe of left lung 897 12 922 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_099500542 chr5:139458570-139488846 Sample_02_0995 Blood MOLM-13_empty vector 542 14 749 42 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_083700491 chr5:139458590-139518491 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 491 12 1542 75 2 56 1068 ECSCR,TMEM173,UBE2D2,DNAJC18
SE_02_090000954 chr5:139458595-139496096 Sample_02_0900 Heart left ventricle_LV1452 954 10 922 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_057700761 chr5:139458601-139488793 Sample_02_0577 Blood MOLM13_empty 761 10 748 42 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_134000466 chr5:139458627-139502057 Sample_02_1340 Blood acute myeloid leukemia 466 17 1079 57 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_112900560 chr5:139458651-139485127 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 560 8 648 31 2 49 1068 ECSCR,TMEM173,DNAJC18
SE_02_099400638 chr5:139458677-139495941 Sample_02_0994 Blood MOLM13_SIK3TQ 638 15 916 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_089001033 chr5:139458890-139496133 Sample_02_0890 Heart left ventricle_LV1200 1033 7 916 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_091600782 chr5:139458960-139484941 Sample_02_0916 Heart left ventricle_DCM_LV1392 782 5 637 30 2 49 1068 ECSCR,TMEM173,DNAJC18
SE_02_088801290 chr5:139458972-139495337 Sample_02_0888 Heart left ventricle_LV1160 1290 10 902 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_091400640 chr5:139458986-139496054 Sample_02_0914 Heart left ventricle_DCM_LV1342 640 6 914 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_089201453 chr5:139459015-139496115 Sample_02_0892 Heart left ventricle_LV1215 1453 8 913 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_092000644 chr5:139459037-139492743 Sample_02_0920 Heart left ventricle_DCM_LV1535 644 7 833 47 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_061701026 chr5:139459087-139496414 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1026 8 920 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_090301297 chr5:139459095-139496107 Sample_02_0903 Heart left ventricle_DCM_LV1009 1297 8 913 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_090901068 chr5:139459123-139496148 Sample_02_0909 Heart left ventricle_DCM_LV1264 1068 6 913 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_089900615 chr5:139459137-139496146 Sample_02_0899 Heart left ventricle_LV1400 615 9 912 49 2 56 1068 ECSCR,TMEM173,DNAJC18
SE_02_091801062 chr5:139459758-139485265 Sample_02_0918 Heart left ventricle_DCM_LV1437 1062 6 628 31 2 45 1068 ECSCR,TMEM173,DNAJC18
SE_02_033500395 chr5:139467743-139483709 Sample_02_0335 Haematopoietic and lymphoid tissue MOLM14_CA25_12 395 1 395 24 2 25 964 TMEM173,ECSCR
SE_02_133200705 chr5:139467763-139484069 Sample_02_1332 Blood Monomac6_CTRL 705 5 405 24 2 25 964 TMEM173,DNAJC18,ECSCR
SE_02_037300422 chr5:139468103-139483360 Sample_02_0373 Skeletal muscle RMS206 422 4 379 23 2 25 964 TMEM173,ECSCR
SE_02_025500630 chr5:139468115-139489079 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 630 5 519 35 2 32 964 TMEM173,ECSCR
SE_02_034700214 chr5:139468186-139489103 Sample_02_0347 Blood AML11 214 4 517 35 2 32 964 TMEM173,ECSCR
SE_02_054800093 chr5:139468288-139525826 Sample_02_0548 Blood THP-1_24h with EtOH 93 10 1465 75 2 32 964 TMEM173,UBE2D2,DNAJC18,ECSCR
SE_02_109900302 chr5:139468303-139504995 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 302 9 921 53 2 32 964 TMEM173,DNAJC18,ECSCR
SE_02_103300506 chr5:139468338-139496335 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 506 4 684 41 2 32 964 TMEM173,DNAJC18,ECSCR
SE_02_062200339 chr5:139468397-139495544 Sample_02_0622 Blood EOL1_Naive 339 12 669 41 2 32 964 TMEM173,DNAJC18,ECSCR
SE_02_103400298 chr5:139470224-139518567 Sample_02_1034 Blood AML cell 298 7 1258 64 2 32 964 TMEM173,UBE2D2,DNAJC18,ECSCR
SE_02_034600101 chr5:139470509-139496255 Sample_02_0346 Blood AML10 101 3 629 38 2 32 964 TMEM173,ECSCR
SE_02_149201144 chr5:139470803-139497402 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1144 9 646 40 2 32 964 TMEM173,DNAJC18,ECSCR
SE_02_087501114 chr5:139470809-139518656 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 1114 16 1244 64 2 32 964 TMEM173,UBE2D2,DNAJC18,ECSCR
SE_02_092101095 chr5:139472331-139493502 Sample_02_0921 Heart embryonic heart_CS22 1095 7 537 34 1 27 964 TMEM173,DNAJC18,ECSCR
SE_02_092201102 chr5:139472403-139493783 Sample_02_0922 Heart fetal heart_PCW10_12434 1102 8 542 35 1 27 964 TMEM173,DNAJC18,ECSCR
SE_02_113000606 chr5:139472424-139483467 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 606 5 283 17 1 20 964 TMEM173,DNAJC18,ECSCR
SE_02_111600715 chr5:139473152-139504685 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 715 6 805 46 1 23 964 TMEM173,DNAJC18,ECSCR
SE_02_046300404 chr5:139473328-139488867 Sample_02_0463 Blood OCI-AML3 cells 404 10 400 28 1 23 964 TMEM173,DNAJC18,ECSCR
SE_02_046100527 chr5:139473745-139488927 Sample_02_0461 Blood MV-4-11-B cells 527 4 391 26 1 23 964 TMEM173,DNAJC18,ECSCR
SE_02_122300725 chr5:139474349-139488896 Sample_02_1223 Bone marrow KMS28BM 725 5 379 26 1 23 964 TMEM173,DNAJC18,ECSCR
SE_02_142900123 chr5:139512046-139613657 Sample_02_1429 Blood GM12878_WT 123 26 2654 159 1 0 409 UBE2D2,TMEM173,CXXC5,ECSCR,PAIP2,SPATA24,SLC23A1,MZB1
Genomic distribution of SEs associated with ECSCR
Genome Browser

The strength of the tissue affected by the gene

Expression of ECSCR

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)