SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000185000
Gene: DGAT1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr8:144314584-144326910 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_138400084 chr8:144217654-144282819 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 84 26 776 158 0 816 8679 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_110200247 chr8:144241143-144289147 Sample_02_1102 Brain LA-N-5 247 17 466 128 0 779 7430 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1,SCRT1
SE_02_062900127 chr8:144241937-144277697 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 127 5 58 79 0 761 7174 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_124400002 chr8:144243950-144277641 Sample_02_1244 Brain KCNR_ATRA 2 11 55 73 0 741 6592 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_110700672 chr8:144250011-144278559 Sample_02_1107 Brain SK-N-AS 672 11 106 62 0 697 5452 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_063100116 chr8:144254250-144277664 Sample_02_0631 Gastrointestinal Stromal GIST-T1_JQ1 116 5 55 45 0 689 4750 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_063000079 chr8:144254340-144278159 Sample_02_0630 Gastrointestinal Stromal GIST-T1_Imatinib 79 5 85 52 0 689 4750 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_147900275 chr8:144254963-144278450 Sample_02_1479 Bone EW-7 275 6 103 48 0 673 4590 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_124300003 chr8:144256319-144277605 Sample_02_1243 Brain KCNR_Ethanol 3 6 49 37 0 647 4222 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_063300130 chr8:144256568-144277794 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 130 4 55 39 0 647 4222 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_155900232 chr8:144260605-144278634 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 232 5 92 36 0 624 3272 MROH1,SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_044100064 chr8:144264209-144277658 Sample_02_0441 Bone M112 64 6 34 22 0 418 1523 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_113600200 chr8:144264363-144277152 Sample_02_1136 Bone U2OS-anaphase/telophase 200 3 28 21 0 391 1433 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_119300556 chr8:144265024-144278624 Sample_02_1193 Brain GBM27 556 1 86 29 0 378 1073 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_110500205 chr8:144266843-144277803 Sample_02_1105 Brain NBL-S 205 1 41 21 0 291 691 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_147400452 chr8:144267076-144277619 Sample_02_1474 Bone CHLA-10 452 5 34 19 0 277 611 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_063200157 chr8:144267891-144277650 Sample_02_0632 Gastrointestinal Stromal GIST-48B_DMSO 157 1 33 17 0 243 440 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_085700254 chr8:144267992-144278747 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 254 2 91 26 0 239 402 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_096200549 chr8:144268443-144278630 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 549 3 85 25 0 231 240 SCX,BOP1,MIR7112,HSF1,MIR6848,DGAT1
SE_02_141900182 chr8:144268634-144277550 Sample_02_1419 Brain hNSC 182 2 33 16 0 231 240 BOP1,MIR7112,HSF1,MIR6848,DGAT1,SCX
SE_02_097100495 chr8:144268714-144278362 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 495 4 76 24 0 231 240 BOP1,MIR7112,HSF1,MIR6848,DGAT1,SCX
SE_02_121200457 chr8:144269704-144283896 Sample_02_1212 Brain GBM30 457 5 260 39 0 196 240 BOP1,MIR7112,HSF1,MIR6848,DGAT1,SCX
SE_02_115000092 chr8:144269724-144278244 Sample_02_1150 Kidney WT 9-12_Nrf2 knockout_vehicle 92 3 67 22 0 196 240 BOP1,MIR7112,HSF1,MIR6848,DGAT1,SCX
SE_02_117700674 chr8:144269769-144294339 Sample_02_1177 Brain GBM05 674 5 578 73 1 235 657 BOP1,HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX
SE_02_156300121 chr8:144269844-144277651 Sample_02_1563 Gastrointestinal Stromal GIST-12_SDHC deletion 121 7 30 15 0 196 240 BOP1,MIR7112,HSF1,MIR6848,DGAT1,SCX
SE_02_095500327 chr8:144269958-144283958 Sample_02_0955 Brain IDH1_2469 327 4 261 39 0 196 240 BOP1,MIR7112,HSF1,MIR6848,DGAT1,SCX
SE_02_114500656 chr8:144270717-144295947 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 656 11 627 74 1 205 657 BOP1,HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX
SE_02_149201360 chr8:144273935-144297178 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1360 6 656 70 1 100 657 BOP1,HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX
SE_02_003100626 chr8:144289440-144306619 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 626 4 534 42 1 43 300 HSF1,BOP1,C8ORFK29,SCRT1,DGAT1
SE_02_138200379 chr8:144290407-144295216 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 379 1 121 9 1 36 292 BOP1,HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX
SE_02_147200910 chr8:144290576-144294205 Sample_02_1472 Fetal lung IMR-90 910 1 90 7 1 35 292 BOP1,HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX
SE_02_072200418 chr8:144291525-144293801 Sample_02_0722 Pancreas PATU8988S_TP63dN_DOX 418 1 73 4 1 20 152 HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX,BOP1
SE_02_138300616 chr8:144291583-144294764 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 616 1 94 7 1 23 135 HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX,BOP1
SE_02_138100692 chr8:144291586-144293622 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 692 1 69 4 1 20 135 HSF1,MIR7112,MIR6848,DGAT1,SCRT1,SCX,BOP1
SE_02_123500339 chr8:144330178-144339845 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 339 4 215 12 0 297 1143 SCRT1,TMEM249,MIR6848,HSF1,SLC52A2,ADCK5,DGAT1,FBXL6,BOP1
SE_02_124400094 chr8:144333209-144339093 Sample_02_1244 Brain KCNR_ATRA 94 4 132 7 0 207 395 SCRT1,TMEM249,MIR6848,HSF1,SLC52A2,ADCK5,DGAT1,FBXL6,BOP1
SE_02_039600843 chr8:144352428-144363443 Sample_02_0396 Skin NHEK-D 843 1 366 32 0 108 2043 GPR172A,C8ORFK29,FBXL6,ADCK5,MIR939,SCRT1,MIR1234,DGAT1,CPSF1
SE_01_011400433 chr8:144353574-144360596 Sample_01_0114 Colon HCT116_encode 433 1 234 19 0 90 1727 SLC52A2,TMEM249,FBXL6,MIR6848,MIR1234,MIR939,SCRT1,DGAT1,ADCK5,CPSF1,MIR6849
SE_02_035800392 chr8:144354238-144364306 Sample_02_0358 Colon LS180 392 1 369 28 0 97 1761 GPR172A,C8ORFK29,FBXL6,ADCK5,MIR939,SCRT1,MIR1234,DGAT1,CPSF1
SE_02_085200491 chr8:144354612-144361658 Sample_02_0852 Mammary gland MCF7L-P 491 1 255 16 0 92 1648 SLC52A2,TMEM249,FBXL6,MIR6848,MIR1234,MIR939,SCRT1,DGAT1,ADCK5,CPSF1,MIR6849
SE_02_115900493 chr8:144354612-144361658 Sample_02_1159 Mammary gland MCF7 493 1 255 16 0 92 1648 SLC52A2,TMEM249,FBXL6,MIR6848,MIR1234,MIR939,SCRT1,DGAT1,ADCK5,CPSF1,MIR6849
SE_02_102900491 chr8:144354641-144362011 Sample_02_1029 Colon HCT116 491 1 268 15 0 92 1643 SLC52A2,TMEM249,FBXL6,MIR6848,MIR1234,MIR939,SCRT1,DGAT1,ADCK5,CPSF1,MIR6849
SE_02_103000393 chr8:144355210-144361681 Sample_02_1030 Colon DKO 393 1 244 13 0 91 1503 TMEM249,SLC52A2,FBXL6,MIR6848,MIR1234,MIR939,SCRT1,DGAT1,ADCK5,CPSF1,MIR6849
SE_02_087400516 chr8:144355541-144360943 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 516 1 205 11 0 87 1319 TMEM249,SLC52A2,FBXL6,MIR6848,MIR1234,MIR939,SCRT1,DGAT1,ADCK5,CPSF1,MIR6849
SE_02_010600402 chr8:144357193-144361180 Sample_02_0106 Skin NHEK_M 402 1 150 12 0 60 1002 GPR172A,FBXL6,ADCK5,MIR939,SCRT1,C8ORFK29,MIR1234,DGAT1,CPSF1
SE_02_087200560 chr8:144360536-144380421 Sample_02_0872 Colon HCT116_siCtrl-5FU 560 5 580 50 1 17 420 SLC52A2,ADCK5,CPSF1,TMEM249,MIR6848,SLC39A4,MIR939,SCRT1,DGAT1,FBXL6,VPS28,MIR1234,MIR6849
SE_02_104301258 chr8:144361777-144384701 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1258 10 626 50 1 9 329 ADCK5,CPSF1,TMEM249,MIR6848,SLC52A2,SLC39A4,MIR939,SCRT1,DGAT1,FBXL6,VPS28,MIR1234,MIR6849
SE_02_087300375 chr8:144362116-144381463 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 375 3 534 47 1 6 212 ADCK5,CPSF1,TMEM249,MIR6848,SLC52A2,SLC39A4,MIR939,SCRT1,DGAT1,FBXL6,VPS28,MIR1234,MIR6849
Genomic distribution of SEs associated with DGAT1
Genome Browser

The strength of the tissue affected by the gene

Expression of DGAT1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)