SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000245598
Gene: DACT3-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr19:46660364-46677447 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_061400583 chr19:46592886-46622708 Sample_02_0614 Liposarcoma MLPS_T2 583 14 936 62 3 153 1437 CALM3,PPP5D1,PTGIR,DACT3,DACT3-AS1,GNG8
SE_02_108200929 chr19:46599875-46614764 Sample_02_1082 Retina retina 929 5 436 18 0 143 1102 PPP5D1,CALM3,DACT3,DACT3-AS1,PTGIR,GNG8
SE_02_120400805 chr19:46599994-46620911 Sample_02_1204 Brain NB2 805 6 653 48 2 144 1238 CALM3,PPP5D1,PTGIR,DACT3,DACT3-AS1,GNG8
SE_02_117300678 chr19:46600096-46620920 Sample_02_1173 Brain GBM01 678 8 651 48 2 144 1239 CALM3,PPP5D1,PTGIR,DACT3,DACT3-AS1,GNG8
SE_02_096200613 chr19:46600133-46621599 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 613 5 673 50 2 151 1378 CALM3,PPP5D1,PTGIR,DACT3,DACT3-AS1,GNG8
SE_02_155400922 chr19:46600165-46623077 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 922 8 724 51 2 153 1437 CALM3,PPP5D1,PTGIR,DACT3,DACT3-AS1,GNG8
SE_02_120501274 chr19:46600184-46614796 Sample_02_1205 Brain NB3 1274 5 425 16 0 143 1102 PPP5D1,CALM3,DACT3,DACT3-AS1,PTGIR,GNG8
SE_02_118100509 chr19:46600217-46617017 Sample_02_1181 Brain GBM10 509 2 513 30 1 143 1102 PPP5D1,CALM3,DACT3,DACT3-AS1,PTGIR,GNG8
SE_02_121200678 chr19:46600223-46621645 Sample_02_1212 Brain GBM30 678 4 672 49 2 152 1387 CALM3,PPP5D1,PTGIR,DACT3,DACT3-AS1,GNG8
SE_02_077501774 chr19:46600271-46623345 Sample_02_0775 Pancreas EndoC-BH1_SE 1774 6 733 54 2 153 1448 CALM3,PPP5D1,PTGIR,DACT3,DACT3-AS1,GNG8
SE_02_096900768 chr19:46600277-46617363 Sample_02_0969 Brain H3.3K27M_PL637 768 6 522 33 1 143 1102 PPP5D1,CALM3,DACT3,DACT3-AS1,PTGIR,GNG8
SE_02_059100490 chr19:46600280-46620095 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 490 6 616 44 1 143 1102 PPP5D1,CALM3,DACT3,DACT3-AS1,PTGIR,GNG8
SE_02_138100681 chr19:46600287-46611743 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 681 9 349 12 0 140 1102 PPP5D1,CALM3,DACT3,DACT3-AS1,PTGIR,GNG8
SE_02_110900076 chr19:46601320-46641198 Sample_02_1109 Brain SK-N-FI 76 7 1205 110 3 252 1949 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_123900218 chr19:46601324-46639911 Sample_02_1239 Skin Waga_virus_positive 218 10 1175 106 3 252 1948 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_110400063 chr19:46601324-46641932 Sample_02_1104 Brain NB-69 63 6 1225 116 3 252 1948 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_104000539 chr19:46601377-46619367 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 539 11 537 39 1 125 946 CALM3,PPP5D1,DACT3,DACT3-AS1,PTGIR,GNG8
SE_00_005100807 chr19:46602359-46630833 Sample_00_0051 Adrenal gland adrenal gland 30y 807 13 923 82 2 183 1471 CALM3,PTGIR,PPP5D1,DACT3,DACT3-AS1,GNG8
SE_01_011100200 chr19:46602370-46640958 Sample_01_0111 Brain SK-N-SH 200 14 1181 110 3 245 1746 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_104600954 chr19:46602448-46639818 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 954 18 1157 106 3 244 1721 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_104800387 chr19:46602558-46639870 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 387 19 1155 106 3 244 1693 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_100900426 chr19:46602811-46621462 Sample_02_1009 Brain Lateral temporal lobe_2T_AD 426 9 601 49 2 115 890 CALM3,PTGIR,PPP5D1,DACT3,DACT3-AS1,GNG8
SE_02_104200531 chr19:46603089-46620260 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 531 8 547 44 1 105 648 CALM3,PPP5D1,DACT3,DACT3-AS1,PTGIR,GNG8
SE_02_082601639 chr19:46603351-46639513 Sample_02_0826 Stomach gastric tumor 1639 10 1125 105 3 211 1644 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_124400033 chr19:46605496-46640014 Sample_02_1244 Brain KCNR_ATRA 33 14 1087 101 3 208 1644 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_123700333 chr19:46606574-46639777 Sample_02_1237 Skin MKL2_virus_positive 333 10 1053 99 3 205 1575 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_124300034 chr19:46610140-46639989 Sample_02_1243 Brain KCNR_Ethanol 34 7 925 94 3 140 1158 CALM3,PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1
SE_02_059300480 chr19:46610996-46622742 Sample_02_0593 Fetal spleenocytes fetal naive T cells 480 5 379 37 2 13 335 PTGIR,PPP5D1,DACT3,DACT3-AS1,CALM3,GNG8
SE_02_057900334 chr19:46616433-46640225 Sample_02_0579 Blood HEL_sgNeg2 334 6 726 80 3 124 996 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_058000355 chr19:46616445-46640283 Sample_02_0580 Blood HEL_sgSIK3e4 355 7 726 80 3 124 996 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_123600368 chr19:46616495-46639060 Sample_02_1236 Skin MKL1_virus_positive 368 7 701 79 3 106 996 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_061300839 chr19:46616775-46639833 Sample_02_0613 Liposarcoma MLPS_T1 839 11 717 77 2 124 996 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_01_009300825 chr19:46618104-46628731 Sample_01_0093 Aorta ascending aorta 825 1 376 40 1 62 717 PTGIR,PPP5D1,DACT3,DACT3-AS1,CALM3,GNG8
SE_02_057600413 chr19:46618207-46632395 Sample_02_0576 Blood HEL_sgLKB1e2 413 1 470 49 1 69 717 PTGIR,PPP5D1,DACT3,DACT3-AS1,CALM3,GNG8
SE_02_110700156 chr19:46619628-46634251 Sample_02_1107 Brain SK-N-AS 156 1 468 52 1 77 783 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_110500281 chr19:46619636-46634353 Sample_02_1105 Brain NBL-S 281 1 472 52 1 78 818 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_106300329 chr19:46619862-46640480 Sample_02_1063 Brain CLB-GA-control 329 5 618 65 2 124 996 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_106400384 chr19:46619918-46640660 Sample_02_1064 Brain CLB-GA-Dinaciclib_8h 384 6 620 68 2 124 996 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_124600300 chr19:46624826-46634247 Sample_02_1246 Brain LAN5_ATRA 300 1 280 36 0 35 166 PTGIR,GNG8,PPP5D1,DACT3,DACT3-AS1,CALM3
SE_02_151000252 chr19:46681995-46736116 Sample_02_1510 Lung H3122_LR_Pano 252 23 1633 157 13 226 3604 PRKD2,MIR320E,STRN4,DACT3,DACT3-AS1,GNG8,FKRP,SLC1A5
SE_02_104801646 chr19:46683448-46705088 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1646 11 617 63 7 56 1081 PRKD2,DACT3,DACT3-AS1,MIR320E,GNG8,FKRP,STRN4
SE_02_122400594 chr19:46691231-46742891 Sample_02_1224 Bone marrow normal plasma cell 594 13 1609 138 13 248 3672 PRKD2,MIR320E,STRN4,DACT3,DACT3-AS1,SLC1A5,FKRP
SE_02_103900216 chr19:46691638-46723177 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 216 4 928 91 10 154 2365 PRKD2,MIR320E,STRN4,DACT3,DACT3-AS1,FKRP
SE_02_102900887 chr19:46692525-46719884 Sample_02_1029 Colon HCT116 887 11 785 76 8 118 1653 PRKD2,MIR320E,STRN4,DACT3,DACT3-AS1,FKRP
SE_02_155300330 chr19:46693721-46741046 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 330 17 1480 131 9 242 3544 PRKD2,MIR320E,STRN4,DACT3,DACT3-AS1,SLC1A5,FKRP
SE_02_121900176 chr19:46704724-46728860 Sample_02_1219 Bone marrow H929 176 5 733 75 5 156 2296 PRKD2,MIR320E,STRN4,DACT3,DACT3-AS1,FKRP
SE_02_122700723 chr19:46704755-46720180 Sample_02_1227 Bone marrow U266 723 3 410 44 4 78 1079 PRKD2,MIR320E,STRN4,DACT3,DACT3-AS1,FKRP
SE_02_153000865 chr19:46711388-46744039 Sample_02_1530 Peripheral blood neutrophils_0BA0X 865 10 1044 86 4 196 2695 PRKD2,STRN4,MIR320E,DACT3-AS1,SLC1A5,FKRP,DACT3,GNG8
SE_02_111900488 chr19:46711422-46734532 Sample_02_1119 Blood KBM7 488 8 733 67 3 165 2333 PRKD2,STRN4,MIR320E,DACT3-AS1,FKRP
SE_02_101701216 chr19:46711425-46741752 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1216 11 965 82 4 196 2695 PRKD2,STRN4,MIR320E,DACT3-AS1,SLC1A5,FKRP
Genomic distribution of SEs associated with DACT3-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of DACT3-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)