SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000119326
Gene: CTNNAL1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr9:108942569-109013522 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_074700966 chr9:108937021-109014157 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 966 21 1822 248 9 165 902 CTNNAL1,FAM206A,IKBKAP,MIR32
SE_02_090401550 chr9:108953238-108997737 Sample_02_0904 Heart left ventricle_DCM_LV1028 1550 12 1029 133 6 82 365 CTNNAL1,FAM206A,IKBKAP,MIR32
SE_02_090701428 chr9:108990819-109038554 Sample_02_0907 Heart left ventricle_DCM_LV1223 1428 14 1185 188 8 115 843 CTNNAL1,TMEM245,MIR32
SE_02_093700389 chr9:108991072-109013561 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 389 7 544 91 4 65 186 CTNNAL1,MIR32
SE_02_091001043 chr9:108991143-109037556 Sample_02_0910 Heart left ventricle_DCM_LV1275 1043 13 1142 180 8 106 794 CTNNAL1,TMEM245,MIR32
SE_02_090801223 chr9:108991164-109037990 Sample_02_0908 Heart left ventricle_DCM_LV1262 1223 16 1157 184 8 106 801 CTNNAL1,TMEM245,MIR32
SE_02_077101284 chr9:108991264-109017429 Sample_02_0771 Ovary OVCA429_shGRHL2 1284 13 635 108 4 75 445 CTNNAL1,TMEM245,MIR32
SE_02_144500701 chr9:108992997-109040211 Sample_02_1445 Adipose SW872_TAZ4SA 701 12 1181 188 6 105 777 CTNNAL1,TMEM245,MIR32
SE_02_077000985 chr9:108993839-109039463 Sample_02_0770 Ovary OVCA429_shLuc 985 22 1138 182 6 103 777 CTNNAL1,TMEM245,MIR32
SE_02_146800493 chr9:108993995-109038801 Sample_02_1468 Blood HUDEP-2_WT 493 7 1116 175 6 103 777 CTNNAL1,TMEM245,MIR32
SE_02_061001309 chr9:109000798-109013537 Sample_02_0610 Liposarcoma MLS 1765-92 1309 3 314 48 1 40 105 CTNNAL1,MIR32
SE_02_048001201 chr9:109000971-109036777 Sample_02_0480 Gingival epithelial HGEP 1201 9 887 133 4 81 715 CTNNAL1,TMEM245,MIR32
SE_02_080800136 chr9:109008934-109118352 Sample_02_0808 Ovary RMG1_ARID1A KO 136 61 2936 445 10 197 1242 CTNNAL1,MIR32,TMEM245,FRRS1L
SE_02_088001483 chr9:109010545-109039428 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1483 7 734 117 4 69 747 CTNNAL1,TMEM245,MIR32
SE_02_143301484 chr9:109011493-109039340 Sample_02_1433 Bone A673 STAG2 null 1484 7 712 113 4 66 747 CTNNAL1,TMEM245,MIR32
SE_02_075300929 chr9:109017214-109028210 Sample_02_0753 Embryo ES-derived progenitors_FG type 929 4 281 33 3 19 274 TMEM245,CTNNAL1,MIR32
SE_02_127901337 chr9:109031038-109067342 Sample_02_1279 Bone Mesenchymal stem cells 1337 7 988 144 2 66 335 MIR32,TMEM245,CTNNAL1
SE_02_143400313 chr9:109053594-109122009 Sample_02_1434 Trophoblast trophoblast stem cells 313 11 1884 295 6 134 613 TMEM245,CTNNAL1,MIR32,FRRS1L
SE_02_032200436 chr9:109062722-109088218 Sample_02_0322 Colon Caco-2 436 3 692 102 3 27 166 C9ORF5,CTNNAL1,MIR32
Genomic distribution of SEs associated with CTNNAL1
Genome Browser

The strength of the tissue affected by the gene

Expression of CTNNAL1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)