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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000178971
Gene: CTC1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:8224815-8248056 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_005100827 chr17:8181498-8202153 Sample_00_0051 Adrenal gland adrenal gland 30y 827 8 610 57 2 55 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_02_082600776 chr17:8183646-8204763 Sample_02_0826 Stomach gastric tumor 776 10 615 62 2 51 772 MIR4521,BORCS6,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_02_156001290 chr17:8185293-8200880 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1290 3 467 46 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_01_010901049 chr17:8185451-8200768 Sample_01_0109 Colon transverse colon_54y 1049 4 460 43 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_02_088701056 chr17:8185494-8200798 Sample_02_0887 Heart left ventricle_LV1121 1056 3 458 43 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883,SLC25A35,C17orf59,AC135178.1,ARHGEF15
SE_02_088901509 chr17:8185527-8200822 Sample_02_0889 Heart left ventricle_LV1183 1509 4 458 43 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883,SLC25A35,C17orf59,AC135178.1,ARHGEF15
SE_02_089101254 chr17:8185566-8200793 Sample_02_0891 Heart left ventricle_LV1202 1254 5 458 43 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883,SLC25A35,C17orf59,AC135178.1,ARHGEF15
SE_02_090601274 chr17:8185572-8200752 Sample_02_0906 Heart left ventricle_DCM_LV1072 1274 3 458 43 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_00_005600704 chr17:8185628-8200928 Sample_00_0056 Sigmoid colon sigmoid colon 3y 704 4 460 43 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883,RANGRF,C17orf59,ARHGEF15
SE_01_010400882 chr17:8185738-8200832 Sample_01_0104 Lung upper lobe of left lung 882 3 455 43 2 51 733 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883,ALOX12B,ALOX15B,C17orf59,ARHGEF15
SE_02_133500310 chr17:8188115-8200661 Sample_02_1335 Lung NCI-H1299_wtSMARCA4_Dox 310 2 295 35 2 51 510 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_02_133700245 chr17:8188118-8201087 Sample_02_1337 Lung NCI-H1299-wtSMARCA4_Dox_SAHA 245 2 309 35 2 51 510 BORCS6,MIR4521,AURKB,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_02_133400248 chr17:8188195-8205239 Sample_02_1334 Lung NCI-H1299_mutSMARCA4 248 3 412 46 2 56 645 BORCS6,AURKB,MIR4521,PER1,SNORD118,VAMP2,CTC1,LINC00324,TMEM107,PFAS,MIR6883
SE_02_109900701 chr17:8191715-8237533 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 701 10 1241 121 3 92 3003 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS,MIR6883,SLC25A35,CCDC42,HES7,ALOXE3,KRBA2,C17orf59
SE_02_057300720 chr17:8191851-8224355 Sample_02_0573 Blood Nalm6_1 720 5 875 88 1 27 1290 LINC00324,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,CTC1,TMEM107,PFAS,MIR6883
SE_02_116200496 chr17:8192048-8226968 Sample_02_1162 Stomach YCC11 496 12 953 96 1 27 1627 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS,MIR6883
SE_02_158300538 chr17:8192439-8228588 Sample_02_1583 Fetal lung IMR90_empty_GM 538 11 1021 100 2 30 1897 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS,MIR6883,C17orf59
SE_02_057800644 chr17:8192445-8227378 Sample_02_0578 Blood MOLM-13_sgSIK3e4 644 8 988 96 1 27 1686 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS,MIR6883
SE_02_057500652 chr17:8192445-8227496 Sample_02_0575 Blood MOLM13_sgLKB1e2 652 7 990 96 1 27 1711 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS,MIR6883
SE_02_148200520 chr17:8192456-8227731 Sample_02_1482 Bone POE 520 5 997 98 2 27 1748 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS,MIR6883
SE_02_148000619 chr17:8199649-8227574 Sample_02_1480 Bone MHH-ES-1 619 5 818 74 1 27 1725 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS
SE_02_099400961 chr17:8200035-8227501 Sample_02_0994 Blood MOLM13_SIK3TQ 961 9 806 71 0 27 1713 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS
SE_02_058100692 chr17:8200407-8227463 Sample_02_0581 Blood MOLM13_empty_HG 692 5 797 69 0 27 1704 LINC00324,CTC1,AURKB,MIR4521,PER1,SNORD118,BORCS6,VAMP2,TMEM107,PFAS
SE_02_076500408 chr17:8217004-8225768 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 408 1 296 20 0 1 743 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_081600813 chr17:8217701-8227391 Sample_02_0816 Ovary Clear cell ovarian cancer 813 6 379 26 0 1 967 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_143201077 chr17:8217823-8235244 Sample_02_1432 Bone A673 STAG2 WT 1077 5 565 44 2 50 2063 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_077200177 chr17:8218065-8227503 Sample_02_0772 Prostate 22Rv1_delSite1_Clone11/12-F6 177 5 370 25 0 1 993 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_077400324 chr17:8218432-8227494 Sample_02_0774 Prostate 22Rv1_delSite1_Clone11/12-D8 324 4 361 22 0 1 989 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_00_004900621 chr17:8218523-8226932 Sample_00_0049 Small intestine small intestine 30y 621 3 316 22 0 1 901 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_065900353 chr17:8219413-8228431 Sample_02_0659 Lung H23 353 1 360 25 1 3 1141 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_138100671 chr17:8219450-8224491 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 671 1 211 13 0 1 569 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_147000807 chr17:8219450-8224579 Sample_02_1470 Umbilical Vein H441 807 1 211 13 0 1 569 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_132100776 chr17:8219567-8227617 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 776 3 326 23 1 1 1009 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_138300605 chr17:8219659-8224372 Sample_02_1383 Pancreas Pancreatic cancer cells_THZ1 605 1 197 13 0 1 569 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_088401089 chr17:8219779-8227629 Sample_02_0884 Colon LoVo 1089 2 323 23 1 1 1009 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_108000834 chr17:8219790-8224424 Sample_02_1080 Muscle JR1 shCtrl 834 2 193 13 0 1 569 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_143301337 chr17:8219849-8224437 Sample_02_1433 Bone A673 STAG2 null 1337 1 191 12 0 1 569 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_058400572 chr17:8219858-8227946 Sample_02_0584 Lung H1299 WT 572 3 329 23 1 1 1062 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_132200853 chr17:8219876-8227421 Sample_02_1322 Connective Tissue HT1080_WT 853 3 316 20 0 1 972 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_126800742 chr17:8219885-8226914 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 742 3 271 20 0 1 897 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_04_000600565 chr17:8219910-8227561 Sample_04_0006 Lung A549 GFP control 565 2 317 22 1 1 1002 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_146900804 chr17:8219916-8224531 Sample_02_1469 Umbilical Vein HUVEC 804 1 194 12 0 1 569 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_064200560 chr17:8219944-8227895 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 560 2 325 22 1 1 1054 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_064000370 chr17:8219946-8227785 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 370 2 324 22 1 1 1036 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_064300378 chr17:8219966-8227675 Sample_02_0643 Mammary gland MDA-MB-436 378 2 319 22 1 1 1018 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_132000932 chr17:8219974-8227510 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 932 5 315 20 0 1 993 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_154100754 chr17:8219994-8227681 Sample_02_1541 Nasopharyngeal HNE1 754 2 319 22 1 1 1019 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_126900709 chr17:8219997-8227483 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 709 2 315 20 0 1 986 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_156001210 chr17:8220005-8238044 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 1210 3 570 48 2 68 2333 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_01_010101075 chr17:8220020-8227451 Sample_01_0101 Pancreas pancreas_54y 1075 2 315 20 0 1 981 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_124000395 chr17:8220026-8227541 Sample_02_1240 Skin MCC13_virus_negative 395 3 315 20 0 1 1001 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_064501545 chr17:8220040-8226993 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1545 4 273 20 0 1 907 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_064900959 chr17:8220055-8227002 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 959 5 274 20 0 1 908 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_080700089 chr17:8220059-8226559 Sample_02_0807 Pancreatic duct pancreatic epithelial cells_ARID1A_KO 89 4 246 18 0 1 843 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_01_011200315 chr17:8220063-8227766 Sample_01_0112 Embryonic kidney HEK293_encode 315 4 321 22 1 1 1032 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_071900667 chr17:8220077-8227442 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 667 7 312 20 0 1 979 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_137901251 chr17:8220134-8227567 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 1251 5 314 22 1 1 1004 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_098901721 chr17:8220144-8227390 Sample_02_0989 Kidney kidney cortex_WT 1721 2 312 20 0 1 967 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_064601109 chr17:8220164-8226945 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1109 3 268 20 0 1 903 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_061701224 chr17:8220199-8227444 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1224 2 311 20 0 1 981 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_01_010700961 chr17:8220206-8224548 Sample_01_0107 Esophagus esophagus squamous epithelium 961 1 189 12 0 1 569 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_062000895 chr17:8220229-8223771 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 895 2 178 11 0 1 475 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_157001307 chr17:8220231-8227819 Sample_02_1570 iPSCs EiPSC 1307 3 319 22 1 1 1043 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_092400849 chr17:8220240-8227719 Sample_02_0924 Heart fetal heart_PCW10_12569 849 2 317 22 1 1 1022 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_089900804 chr17:8220301-8234843 Sample_02_0899 Heart left ventricle_LV1400 804 3 489 38 2 40 1977 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_066900721 chr17:8220329-8238295 Sample_02_0669 Prostate prostate cancer_DSG 721 5 571 48 2 80 2385 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_01_010400878 chr17:8220335-8226985 Sample_01_0104 Lung upper lobe of left lung 878 3 268 20 0 1 906 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_092300961 chr17:8220341-8227446 Sample_02_0923 Heart fetal heart_PCW10_12522 961 2 310 20 0 1 981 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_072600475 chr17:8220354-8227086 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 475 4 289 20 0 1 926 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_143100756 chr17:8220365-8227739 Sample_02_1431 Blood T cell 756 2 316 22 1 1 1029 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_090401539 chr17:8220374-8234798 Sample_02_0904 Heart left ventricle_DCM_LV1028 1539 3 484 38 2 40 1968 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_092901286 chr17:8220380-8227084 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1286 5 288 20 0 1 925 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_092101106 chr17:8220405-8227319 Sample_02_0921 Heart embryonic heart_CS22 1106 2 304 20 0 1 956 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_01_010900954 chr17:8220405-8227356 Sample_01_0109 Colon transverse colon_54y 954 2 305 20 0 1 963 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_091501236 chr17:8220418-8227118 Sample_02_0915 Heart left ventricle_DCM_LV1371 1236 2 290 20 0 1 929 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_088701086 chr17:8220475-8227379 Sample_02_0887 Heart left ventricle_LV1121 1086 2 306 20 0 1 958 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_090600919 chr17:8220523-8235476 Sample_02_0906 Heart left ventricle_DCM_LV1072 919 3 499 40 2 50 2088 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_01_009900690 chr17:8220560-8227496 Sample_01_0099 Colon transverse colon 690 3 306 20 0 1 966 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_081700862 chr17:8220609-8227146 Sample_02_0817 Ovary Epithelial ovarian cancer 862 2 295 19 0 1 907 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_089201443 chr17:8220632-8234597 Sample_02_0892 Heart left ventricle_LV1215 1443 3 479 37 2 40 1895 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_143000137 chr17:8220640-8227144 Sample_02_1430 Blood Kasumi-3_mock-infected 137 2 295 19 0 1 904 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_130900814 chr17:8220665-8227147 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 814 2 295 19 0 1 902 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_112900714 chr17:8220677-8227630 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 714 5 310 21 1 1 980 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_089001059 chr17:8220689-8227294 Sample_02_0890 Heart left ventricle_LV1200 1059 2 301 19 0 1 919 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_00_005201109 chr17:8220697-8227276 Sample_00_0052 Heart left ventricle 3y 1109 2 300 19 0 1 916 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_00_004600880 chr17:8220700-8227094 Sample_00_0046 Heart right ventricle_34y 880 2 284 19 0 1 893 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_00_005500518 chr17:8220714-8227388 Sample_00_0055 Spleen spleen 34y 518 2 304 19 0 1 932 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_074500890 chr17:8220781-8227000 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 890 2 264 19 0 1 865 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_085400572 chr17:8220785-8227658 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 572 2 307 21 1 1 974 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_126200929 chr17:8220786-8227025 Sample_02_1262 Bone Im-GCT-3504_G34W 929 2 267 19 0 1 873 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_00_005600480 chr17:8220829-8236438 Sample_00_0056 Sigmoid colon sigmoid colon 3y 480 5 520 41 2 57 2179 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_01_010600323 chr17:8220834-8227299 Sample_01_0106 Adrenal gland adrenal gland 54y 323 2 298 19 0 1 904 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_048400396 chr17:8220837-8226967 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 396 3 256 18 0 1 857 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_048300277 chr17:8220863-8226952 Sample_02_0483 Bone marrow HSCe_22y_CD34+,CD38-,Lineage- 277 3 253 17 0 1 855 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_00_005800616 chr17:8220881-8226807 Sample_00_0058 Stomach stomach 34y 616 3 248 17 0 1 825 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_155600552 chr17:8220907-8238468 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 552 3 562 46 2 82 2356 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_064400749 chr17:8220945-8226948 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 749 4 247 17 0 1 842 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_112500413 chr17:8220951-8227130 Sample_02_1125 Adipose visceral adipose_CS_VC06 413 3 273 15 0 1 868 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_133500289 chr17:8220954-8227648 Sample_02_1335 Lung NCI-H1299_wtSMARCA4_Dox 289 2 291 17 1 1 954 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_048900330 chr17:8220961-8224091 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 330 1 157 7 0 1 477 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_048700277 chr17:8220964-8224029 Sample_02_0487 Bone marrow HSCe_71y_CD34+,CD38-,Lineage- 277 1 157 7 0 1 464 LINC00324,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS,CTC1
SE_02_084900434 chr17:8220974-8227024 Sample_02_0849 iPSCs iPSC_CBP-30 434 2 249 15 0 1 852 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_055900762 chr17:8220990-8226985 Sample_02_0559 iPSCs FX52 iPSCs dC-T 762 2 242 15 0 1 842 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_065700513 chr17:8221006-8226965 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 513 3 240 15 0 1 840 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_074400873 chr17:8221188-8226969 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 873 2 231 14 0 1 823 LINC00324,CTC1,MIR4521,AURKB,SNORD118,BORCS6,TMEM107,PFAS
SE_02_153000880 chr17:8244706-8250879 Sample_02_1530 Peripheral blood neutrophils_0BA0X 880 1 181 24 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_073900979 chr17:8245035-8251617 Sample_02_0739 Blood Nalm6 979 2 205 27 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_152901063 chr17:8245319-8249411 Sample_02_1529 Peripheral blood neutrophils_0BC75 1063 1 130 17 0 3 155 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_111200632 chr17:8245625-8250747 Sample_02_1112 T lymphocyte THP-6 T-ALL 632 1 150 21 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_075100733 chr17:8245712-8250098 Sample_02_0751 Lymphoma Rec-1_WO 733 1 130 18 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_075000985 chr17:8245720-8250083 Sample_02_0750 Lymphoma Rec-1_GSI 985 1 129 18 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_068701064 chr17:8245990-8250696 Sample_02_0687 Lung NCI-H146_no infection 1064 2 140 19 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_064000703 chr17:8246277-8250418 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 703 1 117 15 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_122000749 chr17:8246374-8250278 Sample_02_1220 Bone marrow JJN3 749 1 110 13 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_061701144 chr17:8246404-8250890 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1144 1 125 16 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_064200777 chr17:8247004-8250250 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 777 1 92 12 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_124000693 chr17:8247062-8250162 Sample_02_1240 Skin MCC13_virus_negative 693 1 91 11 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_143000574 chr17:8247065-8250124 Sample_02_1430 Blood Kasumi-3_mock-infected 574 1 89 11 0 3 177 PFAS,CTC1,AURKB,SLC25A35,RANGRF,LINC00324
SE_02_138100609 chr17:8247088-8266989 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 609 7 639 59 1 106 1810 PFAS,CTC1,AURKB,SLC25A35,ARHGEF15,RANGRF,LINC00324
SE_02_104602162 chr17:8251150-8291015 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2162 12 1192 113 1 186 2923 PFAS,RANGRF,SLC25A35,AURKB,ARHGEF15,ODF4,LINC00324,CTC1
SE_02_067200396 chr17:8269833-8296384 Sample_02_0672 Endometrium endometrium cancer_DSG 396 9 730 74 1 96 1174 PFAS,RANGRF,SLC25A35,ARHGEF15,ODF4,LINC00324,CTC1
SE_02_067400684 chr17:8272314-8293593 Sample_02_0674 Endometrium E1_FA 684 5 578 58 0 73 910 RANGRF,SLC25A35,ARHGEF15,ODF4,LINC00324,PFAS,CTC1
SE_02_098901631 chr17:8272718-8289571 Sample_02_0989 Kidney kidney cortex_WT 1631 5 452 49 0 29 400 RANGRF,SLC25A35,ARHGEF15,LINC00324,PFAS,CTC1
SE_02_111200989 chr17:8273348-8300686 Sample_02_1112 T lymphocyte THP-6 T-ALL 989 7 759 85 1 96 1061 RANGRF,SLC25A35,ARHGEF15,ODF4,LINC00324,PFAS,CTC1
SE_02_104901168 chr17:8275487-8300226 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1168 14 690 78 1 96 1061 RANGRF,SLC25A35,ARHGEF15,PFAS,ODF4,CTC1
SE_02_082601757 chr17:8286042-8300086 Sample_02_0826 Stomach gastric tumor 1757 3 393 44 1 90 1061 RANGRF,SLC25A35,ARHGEF15,PFAS,ODF4,CTC1
Genomic distribution of SEs associated with CTC1
Genome Browser

The strength of the tissue affected by the gene

Expression of CTC1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)