SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000169169
Gene: CPT1C Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:49690898-49713731 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_055200125 chr19:49594339-49662833 Sample_02_0552 Other SYO1 shCt 125 29 2036 146 3 489 5735 RRAS,IRF3,PRR12,SCAF1,PRRG2,CPT1C,MIR5088,BCL2L12,NOSIP,PRMT1,ADM5
SE_02_046500669 chr19:49608429-49645917 Sample_02_0465 Adipose subcutaneous adipocytes 669 13 1079 82 1 208 1974 RRAS,PRR12,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,NOSIP,PRMT1,ADM5
SE_02_147100278 chr19:49612033-49643064 Sample_02_1471 Blood Outgrowth Endothelia BOEC 278 5 867 70 0 190 1789 RRAS,PRR12,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,NOSIP,PRMT1,ADM5
SE_02_127801157 chr19:49613419-49643926 Sample_02_1278 Chordoma UCH1_DMSO_48h 1157 6 841 68 0 189 1789 RRAS,PRR12,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,NOSIP,PRMT1,ADM5
SE_02_097200816 chr19:49614619-49645825 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 816 7 874 68 1 199 1920 RRAS,PRR12,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,NOSIP,PRMT1,ADM5
SE_02_089601006 chr19:49620853-49641979 Sample_02_0896 Heart left ventricle_LV1294 1006 6 595 50 0 139 1162 RRAS,PRR12,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,NOSIP,SCAF1,PRMT1,ADM5
SE_02_036500198 chr19:49628632-49644183 Sample_02_0365 Skeletal muscle NCI0075 198 3 395 32 0 115 699 SCAF1,RRAS,CPT1C,PRRG2,PRMT1,NOSIP,IRF3,BCL2L12,C19ORF76,PRR12
SE_01_008800880 chr19:49629039-49643219 Sample_01_0088 Tibial nerve tibial-nerve 880 4 360 28 0 113 699 SCAF1,RRAS,CPT1C,PRRG2,PRMT1,NOSIP,IRF3,BCL2L12,C19ORF76,PRR12
SE_02_088901221 chr19:49629650-49642998 Sample_02_0889 Heart left ventricle_LV1183 1221 4 343 28 0 113 699 RRAS,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,NOSIP,PRMT1,ADM5
SE_02_061400648 chr19:49629763-49643218 Sample_02_0614 Liposarcoma MLPS_T2 648 4 347 28 0 113 699 RRAS,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,NOSIP,PRMT1,ADM5
SE_02_091600754 chr19:49629870-49642961 Sample_02_0916 Heart left ventricle_DCM_LV1392 754 3 341 27 0 113 699 RRAS,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,NOSIP,PRMT1,ADM5
SE_01_007800857 chr19:49630491-49643361 Sample_01_0078 Heart left ventricle heart-left-ventricle 857 2 320 23 0 114 699 SCAF1,RRAS,CPT1C,PRRG2,PRMT1,NOSIP,IRF3,BCL2L12,C19ORF76,PRR12
SE_02_120000833 chr19:49630764-49643122 Sample_02_1200 Brain GBM36 833 5 307 22 0 113 699 RRAS,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_147600723 chr19:49630774-49646921 Sample_02_1476 Bone EW-1 723 8 413 25 1 145 1110 RRAS,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_01_007500970 chr19:49630778-49643166 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 970 3 307 22 0 113 699 SCAF1,RRAS,CPT1C,PRRG2,PRMT1,IRF3,BCL2L12,C19ORF76,PRR12
SE_02_090600847 chr19:49630843-49642953 Sample_02_0906 Heart left ventricle_DCM_LV1072 847 2 303 22 0 113 699 RRAS,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_090201028 chr19:49630899-49641949 Sample_02_0902 Heart left ventricle_LV1558 1028 4 281 22 0 80 558 RRAS,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,SCAF1,PRMT1,ADM5
SE_00_005500626 chr19:49630944-49651194 Sample_00_0055 Spleen spleen 34y 626 6 527 32 1 157 1271 RRAS,SCAF1,PRRG2,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5,PNKP
SE_02_141600605 chr19:49631297-49663085 Sample_02_1416 Brain SF9402 605 6 846 45 2 263 3127 RRAS,IRF3,SCAF1,PRRG2,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_088600942 chr19:49632379-49648237 Sample_02_0886 Skin foreskin_ p63KLF4 942 4 399 23 1 143 1121 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_01_009000713 chr19:49632438-49643362 Sample_01_0090 Lung upper-lobe-of-left-lung 713 2 261 18 0 112 699 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_143601123 chr19:49633204-49646550 Sample_02_1436 Liver LSEC-Ctrl 1123 6 337 19 1 132 1019 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_143701086 chr19:49633377-49645524 Sample_02_1437 Liver LSEC-TNF 1086 4 303 18 1 127 862 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_038000355 chr19:49634951-49643087 Sample_02_0380 Skeletal muscle RH18 355 1 194 10 0 111 699 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_01_008501086 chr19:49634957-49643504 Sample_01_0085 Stomach stomach 1086 2 202 10 0 112 699 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_143801283 chr19:49635063-49644305 Sample_02_1438 Liver LSEC 1283 3 217 10 0 115 699 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_039600975 chr19:49635110-49643189 Sample_02_0396 Skin NHEK-D 975 1 192 10 0 111 697 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_061501095 chr19:49635213-49645283 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 1095 3 245 12 1 121 784 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_057600950 chr19:49635270-49650177 Sample_02_0576 Blood HEL_sgLKB1e2 950 3 378 18 1 143 1086 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_119900582 chr19:49635297-49643072 Sample_02_1199 Brain GBM35 582 2 182 10 0 111 660 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_089201472 chr19:49635338-49641965 Sample_02_0892 Heart left ventricle_LV1215 1472 3 156 10 0 81 512 RRAS,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,SCAF1,PRMT1,ADM5
SE_02_116700659 chr19:49635344-49646370 Sample_02_1167 Biliary H69_TGF Vehicle_1 659 8 268 13 1 131 941 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_102900830 chr19:49635355-49645868 Sample_02_1029 Colon HCT116 830 5 254 12 1 127 833 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_081900990 chr19:49635487-49643323 Sample_02_0819 Ovary Mucinous ovarian cancer 990 3 175 10 0 111 613 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_101601024 chr19:49635498-49645172 Sample_02_1016 Embryo H9_Mesendoderm_24h 1024 3 225 12 1 120 701 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_114500809 chr19:49635518-49662533 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 809 9 708 32 2 262 2968 RRAS,IRF3,SCAF1,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_01_009800946 chr19:49635524-49643074 Sample_01_0098 Heart left ventricle_51y 946 2 171 10 0 110 610 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_116900943 chr19:49635562-49641903 Sample_02_1169 Biliary H69_TGF beta_16h_2 943 1 145 10 0 76 462 RRAS,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,SCAF1,PRMT1,ADM5
SE_02_116000522 chr19:49635566-49657205 Sample_02_1160 Embryo H1_shLuc 522 3 547 23 1 218 2129 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_064200751 chr19:49635705-49645300 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 751 4 222 12 1 118 677 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_142700340 chr19:49635718-49645450 Sample_02_1427 Shoulder fibroblast_343 340 3 226 12 1 124 709 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_01_010700831 chr19:49636077-49643101 Sample_01_0107 Esophagus esophagus squamous epithelium 831 2 151 9 0 104 492 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5,NOSIP,PTOV1
SE_02_137600856 chr19:49636297-49653695 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 856 4 428 20 1 194 1746 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_082601118 chr19:49636326-49649710 Sample_02_0826 Stomach gastric tumor 1118 4 332 15 1 136 914 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_146001111 chr19:49636757-49646165 Sample_02_1460 Blood Mutz-3 1111 4 213 12 1 121 654 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_146900558 chr19:49636846-49645148 Sample_02_1469 Umbilical Vein HUVEC 558 3 180 9 1 111 485 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_024200901 chr19:49637229-49644112 Sample_02_0242 Colon V481 901 1 136 5 0 98 317 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_01_001200432 chr19:49637250-49645070 Sample_01_0012 Lung A549_dexamethasone_1h 432 1 163 6 1 106 378 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_026400870 chr19:49637352-49643524 Sample_02_0264 Skeletal muscle 7250-empty 870 1 119 4 0 97 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_039500476 chr19:49637361-49644061 Sample_02_0395 Mammary gland BT-549 476 1 129 4 0 98 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_088400601 chr19:49637381-49644008 Sample_02_0884 Colon LoVo 601 1 127 4 0 98 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_035300677 chr19:49637390-49643306 Sample_02_0353 Colon HT29 677 1 113 4 0 97 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_035200549 chr19:49637394-49645867 Sample_02_0352 Colon HCT116 549 2 186 5 1 112 490 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_125800850 chr19:49637410-49644326 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 850 2 134 3 0 100 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_072701166 chr19:49637448-49641982 Sample_02_0727 Fetal lung IMR90_Etoposide 1166 1 84 3 0 67 171 RRAS,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,SCAF1,PRMT1,ADM5
SE_01_003600342 chr19:49637451-49643435 Sample_01_0036 Cervix HeLa-S3 342 1 113 3 0 97 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_00_001101098 chr19:49637477-49643049 Sample_00_0011 Esophagus esophagus 1098 1 106 3 0 96 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_04_000900617 chr19:49637482-49643167 Sample_04_0009 Lung A549 617 1 107 3 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_111100694 chr19:49637485-49643293 Sample_02_1111 Other HGrC1_SMAD2/3KO 694 1 108 3 0 97 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_04_001000708 chr19:49637488-49643085 Sample_04_0010 Lung A549 TGFb 708 1 107 3 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_036900736 chr19:49637524-49643143 Sample_02_0369 Skeletal muscle RD 736 1 107 3 0 96 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_037900737 chr19:49637524-49643143 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 737 1 107 3 0 96 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_142800613 chr19:49637549-49643230 Sample_02_1428 Shoulder fibroblast_316 613 1 108 3 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_01_010901026 chr19:49637585-49641922 Sample_01_0109 Colon transverse colon_54y 1026 1 80 2 0 63 164 RRAS,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,SCAF1,PRMT1,ADM5
SE_02_009300358 chr19:49637592-49643414 Sample_02_0093 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_6 358 2 110 2 0 97 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_024000661 chr19:49637597-49643183 Sample_02_0240 Colon V429_2 661 2 105 2 0 96 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_00_002500448 chr19:49637597-49643315 Sample_00_0025 Muscle of leg muscle-of-leg 448 2 107 2 0 97 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_126400592 chr19:49637606-49643225 Sample_02_1264 Bone Im-GCT-4072_G34W KO 592 2 106 2 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_126900481 chr19:49637608-49643007 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 481 1 102 2 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_102500895 chr19:49637649-49643169 Sample_02_1025 Esophagus KYSE150 895 2 104 2 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_002100573 chr19:49637667-49643308 Sample_02_0021 Colon V429 573 1 106 2 0 97 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_101702027 chr19:49637681-49643581 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 2027 1 111 2 0 97 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_158400807 chr19:49637683-49643118 Sample_02_1584 Brain U87 GBM_Mock 807 1 103 2 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_113600622 chr19:49637706-49643312 Sample_02_1136 Bone U2OS-anaphase/telophase 622 1 105 2 0 97 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_003200844 chr19:49637733-49643125 Sample_02_0032 Pancreas pancreatic-islets-M 844 1 103 2 0 96 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_00_004300209 chr19:49637781-49643300 Sample_00_0043 Stomach stomach_96d 209 1 104 2 0 97 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_093900498 chr19:49637808-49642988 Sample_02_0939 Mammary gland MDA-MB-231_control 498 2 100 2 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_088200935 chr19:49637852-49643183 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 935 1 103 2 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_146800602 chr19:49637897-49644141 Sample_02_1468 Blood HUDEP-2_WT 602 2 120 2 0 97 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_01_003700604 chr19:49637922-49643179 Sample_01_0037 Liver hepatocyte 604 2 99 2 0 95 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_024100694 chr19:49637926-49643031 Sample_02_0241 Colon V456 694 2 96 2 0 95 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_087901568 chr19:49637940-49643616 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1568 1 107 2 0 96 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_147200318 chr19:49638112-49642944 Sample_02_1472 Fetal lung IMR-90 318 1 91 2 0 95 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_066600311 chr19:49638122-49642982 Sample_02_0666 Prostate RWPE1 Lacz rep1 311 2 91 2 0 95 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_124800409 chr19:49638142-49643084 Sample_02_1248 Bladder RT4 409 2 94 2 0 95 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_061701153 chr19:49639339-49643774 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1153 1 94 1 0 95 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_00_002001286 chr19:49639355-49643304 Sample_00_0020 Large intestine large-intestine_108d 1286 1 81 1 0 94 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_00_002600432 chr19:49639358-49643104 Sample_00_0026 Muscle of trunk muscle-of-trunk 432 1 80 1 0 93 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_130900735 chr19:49639430-49642891 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 735 1 77 1 0 93 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_00_003600920 chr19:49639437-49643233 Sample_00_0036 Small intestine small-intestine_108days 920 1 81 1 0 93 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_037500351 chr19:49639510-49643122 Sample_02_0375 Skeletal muscle RMS216 351 1 80 1 0 93 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_088001262 chr19:49639602-49643059 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1262 1 77 1 0 93 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_146600287 chr19:49639666-49643886 Sample_02_1466 Blood HUDEP-2_BCL11AKO 287 1 94 1 0 95 305 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_01_003300193 chr19:49639713-49643814 Sample_01_0033 Embryo H9 193 1 91 1 0 95 305 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_00_001000684 chr19:49639954-49642188 Sample_00_0010 Embryo endodermal-cell 684 1 52 1 0 67 153 SCAF1,RRAS,CPT1C,C19ORF76,PRMT1,IRF3,BCL2L12,PRR12
SE_02_143000839 chr19:49640093-49643129 Sample_02_1430 Blood Kasumi-3_mock-infected 839 1 71 1 0 65 196 RRAS,SCAF1,IRF3,CPT1C,MIR5088,BCL2L12,PRR12,PRMT1,ADM5
SE_02_104901236 chr19:49657430-49665089 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1236 1 228 13 1 56 1253 IRF3,SCAF1,CPT1C,MIR5088,BCL2L12,PRMT1,ADM5,RRAS
SE_02_082700591 chr19:49667715-49679802 Sample_02_0827 Stomach normal gastric 591 4 329 9 1 69 538 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_077500799 chr19:49668008-49680730 Sample_02_0775 Pancreas EndoC-BH1_SE 799 8 349 10 1 84 777 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_101701165 chr19:49671531-49684925 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1165 4 422 11 1 86 858 BCL2L12,PRMT1,MIR5088,IRF3,CPT1C,SCAF1,ADM5,RRAS
SE_01_003300182 chr19:49671560-49681068 Sample_01_0033 Embryo H9 182 3 261 7 1 70 499 BCL2L12,PRMT1,CPT1C,SCAF1,RRAS,IRF3,C19ORF76
SE_02_033000784 chr19:49671589-49680853 Sample_02_0330 Endoderm MHG 784 3 257 7 1 70 499 BCL2L12,PRMT1,CPT1C,SCAF1,RRAS,IRF3,C19ORF76
SE_02_004400548 chr19:49671621-49678688 Sample_02_0044 Embryo endodermal CyT49_ES_D5 548 2 199 6 1 48 217 BCL2L12,PRMT1,CPT1C,SCAF1,RRAS,IRF3,C19ORF76
SE_02_003801644 chr19:49671625-49678962 Sample_02_0038 Embryo DE 1644 2 203 6 1 48 217 BCL2L12,PRMT1,CPT1C,SCAF1,RRAS,IRF3,C19ORF76
SE_02_157001286 chr19:49671671-49684318 Sample_02_1570 iPSCs EiPSC 1286 5 386 11 1 82 762 BCL2L12,PRMT1,MIR5088,IRF3,CPT1C,SCAF1,ADM5,RRAS
SE_02_074400393 chr19:49671783-49680587 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 393 3 246 7 1 70 444 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_074300323 chr19:49671802-49680585 Sample_02_0743 Embryo ES derived mesoderm_day2 323 2 246 7 1 70 444 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_074500687 chr19:49671824-49680758 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 687 2 250 7 1 70 491 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_052500794 chr19:49671829-49680766 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 794 3 250 7 1 70 493 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_036700653 chr19:49671895-49681372 Sample_02_0367 Skeletal muscle NS129 653 2 259 7 1 70 499 BCL2L12,PRMT1,CPT1C,SCAF1,RRAS,IRF3,C19ORF76
SE_02_049301058 chr19:49671918-49680706 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 1058 3 244 7 1 70 476 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_101600830 chr19:49671919-49680497 Sample_02_1016 Embryo H9_Mesendoderm_24h 830 2 240 7 1 69 428 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_074200490 chr19:49672048-49680569 Sample_02_0742 Embryo ESCs_day0 490 3 235 7 1 69 442 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_064501170 chr19:49672079-49680345 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1170 2 229 7 1 68 393 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_122000527 chr19:49672130-49679514 Sample_02_1220 Bone marrow JJN3 527 2 200 6 1 49 217 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_138400783 chr19:49672174-49680544 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 783 2 232 7 1 69 441 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_01_009500619 chr19:49672183-49680576 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 619 3 232 7 1 70 442 BCL2L12,PRMT1,IRF3,CPT1C,MIR5088,SCAF1,ADM5,RRAS
SE_02_058200741 chr19:49675157-49679323 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 741 1 98 2 0 46 130 PRMT1,IRF3,CPT1C,MIR5088,BCL2L12,SCAF1,ADM5,RRAS
SE_02_057400775 chr19:49675235-49679175 Sample_02_0574 Blood MOLM-13_sgNeg2 775 1 94 2 0 46 130 PRMT1,IRF3,CPT1C,MIR5088,BCL2L12,SCAF1,ADM5,RRAS
SE_02_001700716 chr19:49675710-49678973 Sample_02_0017 Embryo H9_ESC 716 1 79 2 0 46 130 PRMT1,CPT1C,SCAF1,RRAS,IRF3,BCL2L12,C19ORF76
SE_02_003601662 chr19:49675728-49678991 Sample_02_0036 Embryo H7 1662 1 78 2 0 46 130 PRMT1,CPT1C,SCAF1,RRAS,IRF3,BCL2L12,C19ORF76
SE_02_001900597 chr19:49675733-49678955 Sample_02_0019 Embryo Neural crest cells 597 1 78 2 0 46 130 PRMT1,CPT1C,SCAF1,RRAS,IRF3,BCL2L12,C19ORF76
SE_02_064600992 chr19:49677089-49679982 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 992 1 74 0 0 47 175 PRMT1,IRF3,CPT1C,MIR5088,BCL2L12,SCAF1,ADM5,RRAS
SE_02_085400736 chr19:49685503-49692356 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 736 1 191 11 1 24 1450 PRMT1,ADM5,CPT1C,IRF3,MIR5088,BCL2L12,SCAF1,RRAS
SE_02_104300470 chr19:49737088-49786883 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 470 23 1382 81 2 125 1719 AP2A1,TSKS,MIR6800,CPT1C,MED25,MIR6799,ADM5,FUZ
SE_02_133200521 chr19:49738107-49781836 Sample_02_1332 Blood Monomac6_CTRL 521 11 1214 70 1 110 1460 AP2A1,TSKS,CPT1C,MED25,MIR6799,ADM5,FUZ
Genomic distribution of SEs associated with CPT1C
Genome Browser

The strength of the tissue affected by the gene

Expression of CPT1C

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)