SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000162377
Gene: COA7 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:52684449-52698347 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_059700212 chr1:52658250-52675524 Sample_02_0597 Mammary gland MCF10A_Nutlin3A 212 6 402 50 0 51 382 FAM159A,COA7
SE_02_053000986 chr1:52658319-52673127 Sample_02_0530 Mammary gland MCF10A 986 8 350 41 0 42 382 FAM159A,COA7
SE_02_060100347 chr1:52658355-52673690 Sample_02_0601 Mammary gland MCF10A_p53shRNA_Nutlin3A 347 7 361 42 0 44 382 FAM159A,COA7
SE_02_060400217 chr1:52658380-52673654 Sample_02_0604 Mammary gland MCF10A_scrshRNA_DMSO 217 5 361 42 0 44 382 FAM159A,COA7
SE_02_059500144 chr1:52658384-52673801 Sample_02_0595 Mammary gland MCF10A_scrshRNA_Nutlin3A 144 6 364 44 0 44 382 FAM159A,COA7
SE_02_060000396 chr1:52658397-52673581 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 396 5 359 42 0 44 382 FAM159A,COA7
SE_00_005300797 chr1:52659050-52676336 Sample_00_0053 Embryo trophoblast cell originated from H1 797 6 412 52 0 49 382 FAM159A,COA7
SE_02_072500467 chr1:52659083-52673052 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 467 9 334 41 0 40 382 FAM159A,COA7
SE_02_112100950 chr1:52659088-52675665 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 950 11 395 50 0 49 382 FAM159A,COA7
SE_02_048001064 chr1:52659228-52674863 Sample_02_0480 Gingival epithelial HGEP 1064 9 372 48 0 42 380 FAM159A,COA7
SE_02_103600575 chr1:52731831-52872932 Sample_02_1036 Mammary gland HCC70_XY018 575 51 3706 484 7 135 1564 ZYG11A,ZYG11B,ECHDC2,COA7
Genomic distribution of SEs associated with COA7
Genome Browser

The strength of the tissue affected by the gene

Expression of COA7

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)