SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000135702
Gene: CHST5 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:75528535-75535247 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_000300633 chr16:75451264-75500378 Sample_00_0003 Adrenal gland adrenal-gland_97d 633 8 1680 172 1 102 1615 TMEM170A,CHST6,CHST5,CFDP1
SE_02_080800794 chr16:75457104-75492848 Sample_02_0808 Ovary RMG1_ARID1A KO 794 14 1218 113 0 68 1446 TMEM170A,CHST6,CFDP1,CHST5
SE_02_066000324 chr16:75471611-75520738 Sample_02_0660 Mammary gland MCF10DCIS 324 24 1607 151 2 89 1327 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
SE_02_153900727 chr16:75473271-75517458 Sample_02_1539 Nasopharyngeal C666-1 727 14 1439 132 2 89 1275 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
SE_02_136700424 chr16:75482503-75517379 Sample_02_1367 Pancreas Capan1-untreated 424 7 1134 119 2 48 155 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
SE_02_070900860 chr16:75482904-75517371 Sample_02_0709 Pancreas hT85_organoid 860 10 1105 116 2 48 155 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
SE_02_132001240 chr16:75505876-75517375 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1240 4 359 43 1 5 0 TMEM170A,CHST5,CHST6,GABARAPL2,TMEM231
SE_02_103601225 chr16:75516558-75517392 Sample_02_1036 Mammary gland HCC70_XY018 1225 1 18 3 0 0 0 CHST6,GABARAPL2,CHST5,TMEM231
SE_02_090300631 chr16:75538512-75600095 Sample_02_0903 Heart left ventricle_DCM_LV1009 631 18 1886 201 4 149 1451 TMEM231,GABARAPL2,ADAT1,CHST5,CHST6,KARS,TERF2IP
SE_02_090700844 chr16:75538544-75599872 Sample_02_0907 Heart left ventricle_DCM_LV1223 844 18 1875 201 4 149 1441 TMEM231,GABARAPL2,ADAT1,CHST5,CHST6,KARS,TERF2IP
SE_02_091300693 chr16:75538605-75600155 Sample_02_0913 Heart left ventricle_DCM_LV1304 693 17 1882 201 4 149 1448 TMEM231,GABARAPL2,ADAT1,CHST5,CHST6,KARS,TERF2IP
SE_02_090800836 chr16:75538708-75600028 Sample_02_0908 Heart left ventricle_DCM_LV1262 836 17 1872 198 4 149 1426 TMEM231,GABARAPL2,ADAT1,CHST5,CHST6,KARS,TERF2IP
SE_02_104901679 chr16:75549741-75587966 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1679 11 1155 106 2 112 612 TMEM231,GABARAPL2,CHST5,ADAT1
SE_02_045300767 chr16:75550124-75599970 Sample_02_0453 Neuroblastoma SJNB3 767 8 1482 141 2 121 832 TMEM231,GABARAPL2,ADAT1,CHST5,KARS,TERF2IP
SE_02_108200887 chr16:75554232-75572257 Sample_02_1082 Retina retina 887 4 552 41 1 75 515 TMEM231,GABARAPL2,CHST5
SE_02_077501110 chr16:75561780-75567077 Sample_02_0775 Pancreas EndoC-BH1_SE 1110 2 167 11 0 34 253 GABARAPL2,CHST5,TMEM231,AC025287.1
Genomic distribution of SEs associated with CHST5
Genome Browser

The strength of the tissue affected by the gene

Expression of CHST5

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)