SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000203878
Gene: CHIAP2 Gene type: transcribed_unprocessed_pseudogene
Strand: + External links:
Genomic region: chr1:111280059-111286116 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700951 chr1:111180836-111233743 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 951 13 1487 166 2 226 1749 CEPT1,DENND2D,CHI3L2,DRAM2,CHIAP2
SE_02_075100014 chr1:111186865-111245929 Sample_02_0751 Lymphoma Rec-1_WO 14 18 1718 223 3 159 1980 CHI3L2,DENND2D,CEPT1,CHIA,DRAM2,CHIAP2
SE_02_143400066 chr1:111188975-111239180 Sample_02_1434 Trophoblast trophoblast stem cells 66 10 1431 173 1 143 1503 CHI3L2,DENND2D,CEPT1,DRAM2,CHIAP2
SE_02_093000052 chr1:111189001-111242501 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 52 29 1536 196 2 143 1652 CHI3L2,DENND2D,CEPT1,CHIA,DRAM2,CHIAP2
SE_02_143500045 chr1:111189031-111238643 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 45 8 1406 173 1 143 1410 CHI3L2,DENND2D,CEPT1,DRAM2,CHIAP2
SE_02_104300391 chr1:111189870-111251279 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 391 31 1792 251 3 140 1683 CHI3L2,DENND2D,CEPT1,CHIA,DRAM2,CHIAP2
SE_02_081600783 chr1:111190036-111234509 Sample_02_0816 Ovary Clear cell ovarian cancer 783 14 1240 148 1 140 1171 CHI3L2,DENND2D,CEPT1,DRAM2,CHIAP2
SE_02_111200158 chr1:111190453-111230641 Sample_02_1112 T lymphocyte THP-6 T-ALL 158 4 1096 125 1 138 1073 CHI3L2,DENND2D,CHIAP2
SE_02_119500337 chr1:111190595-111231018 Sample_02_1195 Brain GBM29 337 16 1112 131 1 138 1121 CHI3L2,DENND2D,CHIAP2
SE_02_078300051 chr1:111191804-111231751 Sample_02_0783 Blood MEC2 51 6 1109 131 1 124 1171 CHI3L2,DENND2D,CHIAP2
SE_02_125300089 chr1:111192189-111254757 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 89 21 1834 275 4 122 1643 CHI3L2,DENND2D,CHIA,CHIAP2
SE_02_075000029 chr1:111192349-111233283 Sample_02_0750 Lymphoma Rec-1_GSI 29 11 1130 135 1 119 1106 CHI3L2,DENND2D,CHIAP2
SE_02_122500063 chr1:111192613-111232036 Sample_02_1225 Bone marrow RAJI 63 11 1094 130 1 119 1074 CHI3L2,DENND2D,CHIAP2,CEPT1,CHIA,DRAM2
SE_02_136200718 chr1:111192958-111239294 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 718 13 1321 165 1 114 1363 CHI3L2,DENND2D,CHIAP2
SE_02_136100628 chr1:111193020-111239372 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 628 8 1326 165 1 111 1363 CHI3L2,DENND2D,CHIAP2
SE_02_099800119 chr1:111193528-111232131 Sample_02_0998 Lymphoma OCI-LY1_DMSO 119 17 1072 131 1 107 1074 CHI3L2,DENND2D,CHIAP2
SE_02_107100137 chr1:111202503-111233779 Sample_02_1071 Blood Jurkat_WT 137 12 861 104 1 64 443 CHI3L2,DENND2D,CHIAP2,CEPT1,WDR77
SE_02_099900256 chr1:111207204-111232328 Sample_02_0999 Lymphoma OCI-LY1_966 256 10 701 86 1 17 247 CHI3L2,DENND2D,CHIAP2
SE_02_112100403 chr1:111208557-111238781 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 403 13 867 114 1 14 465 CHI3L2,DENND2D,CHIAP2
SE_02_077001325 chr1:111209257-111238796 Sample_02_0770 Ovary OVCA429_shLuc 1325 14 847 111 1 14 465 CHI3L2,DENND2D,CHIAP2
SE_02_121700052 chr1:111212364-111231829 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 52 3 558 67 1 14 247 CHI3L2,DENND2D,CHIAP2,CEPT1,WDR77
SE_02_075600204 chr1:111212368-111234875 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 204 5 646 79 1 14 262 CHI3L2,DENND2D,CHIAP2
SE_02_121500061 chr1:111212390-111231562 Sample_02_1215 Blood Jurkat ZBTB1 KO_Asparagine deprivation 61 2 546 66 1 13 247 CHI3L2,DENND2D,CHIAP2,CEPT1,WDR77
SE_02_139800780 chr1:111212461-111243090 Sample_02_1398 Bone U2OS_siNC 780 7 926 127 2 13 697 CHI3L2,CHIA,CHIAP2,DENND2D
SE_02_075300653 chr1:111212529-111243493 Sample_02_0753 Embryo ES-derived progenitors_FG type 653 6 939 130 2 13 750 CHI3L2,CHIA,CHIAP2,DENND2D
SE_02_121600044 chr1:111212999-111231848 Sample_02_1216 Blood Jurkat ZBTB1 KO 44 4 546 67 1 12 247 CHI3L2,DENND2D,CHIAP2,CEPT1,WDR77
SE_02_047600830 chr1:111213036-111237799 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 830 10 734 96 1 12 433 CHI3L2,DENND2D,CHIAP2
SE_02_127801140 chr1:111214458-111231418 Sample_02_1278 Chordoma UCH1_DMSO_48h 1140 4 482 58 1 11 236 CHI3L2,DENND2D,CHIAP2
SE_02_061400276 chr1:111216748-111252397 Sample_02_0614 Liposarcoma MLPS_T2 276 23 1099 175 3 5 759 CHI3L2,CHIA,CHIAP2,DENND2D
SE_02_141001638 chr1:111223118-111250494 Sample_02_1410 Brain GSC6 1638 4 831 139 2 0 759 CHI3L2,CHIA,CHIAP2,DENND2D
SE_02_152200225 chr1:111223424-111276283 Sample_02_1522 Skin A375 RTKi 225 14 1554 272 4 2 759 CHI3L2,CHIA,CHIAP2,DENND2D
SE_02_057000776 chr1:111234256-111254896 Sample_02_0570 Brain LN229_10_mM_glucose 776 8 658 133 3 2 512 CHI3L2,CHIA,CHIAP2,DENND2D
Genomic distribution of SEs associated with CHIAP2
Genome Browser

The strength of the tissue affected by the gene

Expression of CHIAP2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)