SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000189052
Gene: CGB5 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:49043848-49045311 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090301235 chr19:48967275-48994429 Sample_02_0903 Heart left ventricle_DCM_LV1009 1235 8 870 34 2 103 1944 GYS1,RUVBL2,CGB2,DHDH,LHB,NUCB1-AS1,CGB5,CGB1,MIR6798,CGB,FTL,SNAR-G1,BAX,LOC101059948,SNAR-G2
SE_01_007600716 chr19:48969915-48995210 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 716 1 807 32 2 90 1516 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,DHDH,LHB,CGB5,CGB1
SE_01_009400579 chr19:48974316-48994783 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 579 1 646 27 2 80 1280 GYS1,RUVBL2,CGB2,DHDH,LHB,BAX,CGB5,CGB1,MIR6798,CGB,FTL,SNAR-G1,LOC101059948,SNAR-G2
SE_02_036700118 chr19:48975165-48995010 Sample_02_0367 Skeletal muscle NS129 118 1 621 25 2 74 1163 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,DHDH,LHB,CGB5,CGB1
SE_02_036800371 chr19:48984568-48994744 Sample_02_0368 Skeletal muscle NS134 371 1 312 16 1 55 735 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,LHB,CGB5,CGB1
SE_02_037200657 chr19:48988734-48994773 Sample_02_0372 Skeletal muscle RMS008 657 1 174 13 1 33 433 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,LHB,CGB5,CGB1
SE_02_021601364 chr19:49009566-49026745 Sample_02_0216 Skin NHEK_scramble 1364 4 791 63 0 126 1914 RUVBL2,LHB,CGB,CGB8,GYS1,SNAR-G1,FTL,KCNA7,CGB2,CGB7,NTF4,SNAR-G2,CGB5,CGB1
SE_02_021601228 chr19:49051148-49067889 Sample_02_0216 Skin NHEK_scramble 1228 4 658 51 0 100 1661 NTF4,KCNA7,CGB7,SNRNP70,CGB8,LIN7B,SNAR-G1,CGB2,CGB,LHB,SNAR-G2,CGB5,CGB1
SE_02_039601337 chr19:49055442-49071325 Sample_02_0396 Skin NHEK-D 1337 3 503 37 0 102 1877 NTF4,KCNA7,CGB7,SNRNP70,CGB8,LIN7B,C19ORF73,SNAR-G1,PPFIA3,CGB2,CGB,LHB,SNAR-G2,CGB5,CGB1
SE_02_074501405 chr19:49064205-49067815 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1405 3 80 3 0 43 248 KCNA7,CGB2,LHB,SNAR-G1,SNRNP70,CGB5,CGB1,CGB,LIN7B,LOC101059948,CGB8,SNAR-G2,CGB7,NTF4
SE_02_077502412 chr19:49067875-49088699 Sample_02_0775 Pancreas EndoC-BH1_SE 2412 6 630 49 1 87 1129 SNRNP70,KCNA7,CGB2,SNAR-G1,CGB5,CGB1,CGB,LIN7B,LOC101059948,CGB8,SNAR-G2,CGB7,C19ORF73,NTF4,PPFIA3
Genomic distribution of SEs associated with CGB5
Genome Browser

The strength of the tissue affected by the gene

Expression of CGB5

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)