SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000153774
Gene: CFDP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:75293698-75433503 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_000300633 chr16:75451264-75500378 Sample_00_0003 Adrenal gland adrenal-gland_97d 633 8 1680 172 1 102 1615 TMEM170A,CHST6,CHST5,CFDP1
SE_02_080800794 chr16:75457104-75492848 Sample_02_0808 Ovary RMG1_ARID1A KO 794 14 1218 113 0 68 1446 TMEM170A,CHST6,CFDP1,CHST5
SE_02_103500341 chr16:75469166-75529874 Sample_02_1035 Mammary gland HCC70_Vehicle 341 28 2005 188 2 116 1583 CHST5,CHST6,TMEM170A,CFDP1,GABARAPL2,TMEM231
SE_02_066000324 chr16:75471611-75520738 Sample_02_0660 Mammary gland MCF10DCIS 324 24 1607 151 2 89 1327 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
SE_02_039601270 chr16:75472590-75542941 Sample_02_0396 Skin NHEK-D 1270 14 2357 252 3 161 2614 TMEM231,CHST6,CHST5,TMEM170A,CFDP1,GABARAPL2
SE_02_104601189 chr16:75472809-75531927 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1189 20 1967 182 2 128 1902 CHST5,CHST6,TMEM170A,CFDP1,GABARAPL2,TMEM231
SE_02_153900727 chr16:75473271-75517458 Sample_02_1539 Nasopharyngeal C666-1 727 14 1439 132 2 89 1275 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
SE_02_008600480 chr16:75481388-75551453 Sample_02_0086 Pancreas CAPAN1 480 8 2359 269 4 130 1660 TMEM231,CHST6,CHST5,TMEM170A,CFDP1,GABARAPL2
SE_02_021600271 chr16:75482502-75545638 Sample_02_0216 Skin NHEK_scramble 271 12 2134 249 3 122 1507 TMEM231,CHST6,CHST5,TMEM170A,CFDP1,GABARAPL2
SE_02_136700424 chr16:75482503-75517379 Sample_02_1367 Pancreas Capan1-untreated 424 7 1134 119 2 48 155 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
SE_02_070900860 chr16:75482904-75517371 Sample_02_0709 Pancreas hT85_organoid 860 10 1105 116 2 48 155 CHST6,TMEM170A,CFDP1,CHST5,GABARAPL2,TMEM231
Genomic distribution of SEs associated with CFDP1
Genome Browser

The strength of the tissue affected by the gene

Expression of CFDP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)