SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: CEBPA-AS1 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_046501240 chr19:33209904-33254564 Sample_02_0465 Adipose subcutaneous adipocytes 1240 21 1427 38 4 188 1056 SLC7A10,LRP3,CEBPA-AS1,CEBPA
SE_02_055300070 chr19:33233168-33302565 Sample_02_0553 Other HSSY2 shCt 70 30 2184 88 6 508 649 CEBPA,LRP3,CEBPA-AS1,SLC7A10
SE_02_104700719 chr19:33234675-33301457 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 719 23 2118 87 6 419 367 CEBPA,LRP3,CEBPA-AS1,SLC7A10
SE_02_077500339 chr19:33237469-33299101 Sample_02_0775 Pancreas EndoC-BH1_SE 339 16 1969 73 5 360 0 LRP3,CEBPA-AS1,SLC7A10,CEBPA
SE_02_114600062 chr19:33240926-33299698 Sample_02_1146 Peripheral nerve STS26T PRC2 WT 62 16 1875 76 4 360 0 LRP3,CEBPA-AS1,SLC7A10,CEBPA
SE_02_131600096 chr19:33241010-33302552 Sample_02_1316 Brain hMGLs_TREM2-R47H 96 24 1932 81 4 488 645 CEBPA,LRP3,CEBPA-AS1,SLC7A10
SE_02_131300171 chr19:33241085-33302598 Sample_02_1313 Brain hMGLs_CD33_SNP 171 21 1931 81 4 491 658 CEBPA,LRP3,CEBPA-AS1,SLC7A10
SE_02_109800006 chr19:33241937-33302517 Sample_02_1098 Blood THP1_DMSO_noPMA 6 14 1907 81 4 474 632 CEBPA,LRP3,CEBPA-AS1,SLC7A10
SE_02_152900361 chr19:33246348-33302558 Sample_02_1529 Peripheral blood neutrophils_0BC75 361 21 1764 76 4 476 645 CEBPA,CEBPA-AS1,SLC7A10
SE_02_153000353 chr19:33246368-33301562 Sample_02_1530 Peripheral blood neutrophils_0BA0X 353 15 1747 75 4 391 376 CEBPA,CEBPA-AS1,SLC7A10
SE_02_046300040 chr19:33246893-33302426 Sample_02_0463 Blood OCI-AML3 cells 40 29 1744 76 4 462 610 CEBPA,CEBPA-AS1,SLC7A10
SE_02_153100495 chr19:33247847-33302532 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 495 13 1713 76 4 458 638 CEBPA,CEBPA-AS1,SLC7A10
SE_02_133100013 chr19:33247974-33301613 Sample_02_1331 Blood Molm13_CTRL 13 16 1693 75 4 377 382 CEBPA,CEBPA-AS1,SLC7A10
SE_02_093000310 chr19:33248106-33302536 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 310 32 1704 76 4 458 641 CEBPA,CEBPA-AS1,SLC7A10
SE_02_092900294 chr19:33248221-33301651 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 294 18 1689 75 4 377 394 CEBPA,CEBPA-AS1,SLC7A10
SE_02_092700574 chr19:33248634-33301634 Sample_02_0927 Peripheral blood neutrophils_US 574 11 1677 75 4 375 391 CEBPA,CEBPA-AS1,SLC7A10
SE_02_131500186 chr19:33248870-33302568 Sample_02_1315 Brain hMGLs_INPP5D SNP 186 18 1677 75 4 457 649 CEBPA,CEBPA-AS1,SLC7A10
SE_02_045900801 chr19:33248910-33302546 Sample_02_0459 Blood ME-1_DMSO_6h 801 11 1677 75 4 453 644 CEBPA,CEBPA-AS1,SLC7A10
SE_02_046400027 chr19:33248988-33269053 Sample_02_0464 Bone marrow MOLM-13 27 14 670 19 2 75 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_131700126 chr19:33248991-33300339 Sample_02_1317 Brain hMGLs_SORL1-KO 126 21 1629 72 4 338 114 CEBPA,CEBPA-AS1,SLC7A10
SE_02_131400254 chr19:33249035-33290383 Sample_02_1314 Brain hMGLs_TREM2-KO 254 11 1328 48 3 236 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_134200256 chr19:33249042-33274499 Sample_02_1342 Blood NB4 256 13 843 28 2 118 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_131200230 chr19:33249077-33288137 Sample_02_1312 Brain hMGLs_WT 230 13 1270 45 3 203 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_134100148 chr19:33249135-33301668 Sample_02_1341 Blood MV411 148 14 1656 74 4 372 396 CEBPA,CEBPA-AS1,SLC7A10
SE_02_134700070 chr19:33249194-33302518 Sample_02_1347 Leukophereses leukophereses_p401 70 16 1666 75 4 449 633 CEBPA,CEBPA-AS1,SLC7A10
SE_02_131800221 chr19:33249231-33300469 Sample_02_1318 Brain hMGLs_SORL1-A528T 221 16 1624 72 4 348 129 CEBPA,CEBPA-AS1,SLC7A10
SE_02_134500033 chr19:33249595-33301751 Sample_02_1345 Leukophereses leukophereses_p358 33 22 1637 75 4 378 430 CEBPA,CEBPA-AS1,SLC7A10
SE_02_062200054 chr19:33250226-33302400 Sample_02_0622 Blood EOL1_Naive 54 26 1623 75 4 441 602 CEBPA,CEBPA-AS1,SLC7A10
SE_02_104801191 chr19:33260933-33293819 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1191 7 1049 47 3 255 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_061300978 chr19:33261303-33301108 Sample_02_0613 Liposarcoma MLPS_T1 978 15 1252 69 3 314 279 CEBPA,CEBPA-AS1,SLC7A10
SE_02_087300378 chr19:33265381-33298721 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 378 5 1042 51 3 274 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_052800053 chr19:33266835-33273935 Sample_02_0528 Blood MV-411 53 4 246 13 0 77 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_068100484 chr19:33273305-33285564 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 484 7 407 13 1 95 0 CEBPA-AS1,CEBPA,SLC7A10
SE_02_153900691 chr19:33273316-33301226 Sample_02_1539 Nasopharyngeal C666-1 691 7 859 47 2 256 314 CEBPA,CEBPA-AS1,SLC7A10
SE_02_143400242 chr19:33273369-33301636 Sample_02_1434 Trophoblast trophoblast stem cells 242 6 867 47 2 275 392 CEBPA,CEBPA-AS1,SLC7A10
SE_02_046500090 chr19:33273418-33302528 Sample_02_0465 Adipose subcutaneous adipocytes 90 17 880 48 2 354 638 CEBPA,CEBPA-AS1,SLC7A10
SE_02_061400681 chr19:33273453-33301438 Sample_02_0614 Liposarcoma MLPS_T2 681 12 859 47 2 266 362 CEBPA,CEBPA-AS1,SLC7A10
SE_02_050400575 chr19:33273453-33302517 Sample_02_0504 Esophagus KYSE510_1 575 9 875 48 2 350 632 CEBPA,CEBPA-AS1,SLC7A10
SE_02_047600299 chr19:33273849-33300752 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 299 16 818 45 2 230 206 CEBPA,CEBPA-AS1,SLC7A10
SE_02_143500459 chr19:33277599-33301506 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 459 5 720 43 2 228 370 CEBPA,CEBPA-AS1
SE_00_005300573 chr19:33278304-33302374 Sample_00_0053 Embryo trophoblast cell originated from H1 573 12 703 42 2 297 597 CEBPA,CEBPA-AS1
SE_02_136200782 chr19:33289700-33302537 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 782 4 363 28 1 241 641 CEBPA,CEBPA-AS1
SE_02_063500146 chr19:33291095-33302458 Sample_02_0635 Synovial sarcoma HSSYII_Untreated 146 6 321 27 1 210 618 CEBPA,CEBPA-AS1
SE_02_046400079 chr19:33292385-33301848 Sample_02_0464 Bone marrow MOLM-13 79 9 282 26 0 149 453 CEBPA,CEBPA-AS1
SE_02_099300842 chr19:33329095-33333914 Sample_02_0993 Blood MOLM-13_empty 842 3 130 11 0 11 0 CEBPA-AS1,CEBPG,CEBPA
SE_02_099400829 chr19:33329176-33334084 Sample_02_0994 Blood MOLM13_SIK3TQ 829 2 134 13 1 11 0 CEBPA-AS1,CEBPG,CEBPA
SE_02_099500866 chr19:33329214-33333450 Sample_02_0995 Blood MOLM-13_empty vector 866 1 115 11 0 8 0 CEBPA-AS1,CEBPG,CEBPA
SE_02_060000469 chr19:33349925-33377021 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 469 6 744 121 1 49 224 CEBPG,CEBPA-AS1,CEBPA
SE_02_050400553 chr19:33350497-33406921 Sample_02_0504 Esophagus KYSE510_1 553 12 1728 238 8 207 1322 CEBPG,PEPD,CEBPA-AS1,CEBPA
Genomic distribution of SEs associated with CEBPA-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of CEBPA-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)