Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000179242 |
| Gene: | CDH4 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr20:61252261-61940617 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_059400915 | chr20:61412903-61451196 |
Sample_02_0594 | iPSC-derived | neural progenitors | 915 | 6 | 1215 | 39 | 30 | 101 | 0 | CDH4 |
| SE_02_105300020 | chr20:61424456-61566345 |
Sample_02_1053 | Esophagus | OACM5.1 | 20 | 62 | 4800 | 127 | 48 | 294 | 81 | CDH4 |
| SE_02_157200186 | chr20:61433470-61452266 |
Sample_02_1572 | iPSCs | FiPSC | 186 | 6 | 587 | 26 | 22 | 78 | 0 | CDH4 |
| SE_02_101500622 | chr20:61433647-61454802 |
Sample_02_1015 | Embryo | H9_ Undifferentiated | 622 | 7 | 646 | 28 | 22 | 88 | 0 | CDH4 |
| SE_01_009500259 | chr20:61433950-61462288 |
Sample_01_0095 | Embryo | neuroepithelial stem cell stably expressing HES5 originated from H9 | 259 | 4 | 886 | 38 | 23 | 101 | 0 | CDH4 |
| SE_02_086000115 | chr20:61433983-61454269 |
Sample_02_0860 | iPSCs | SAH_SMARCB1_K364del/+ | 115 | 10 | 619 | 27 | 21 | 88 | 0 | CDH4 |
| SE_02_101701919 | chr20:61434017-61454579 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 1919 | 4 | 629 | 27 | 21 | 88 | 0 | CDH4 |
| SE_02_068000235 | chr20:61434303-61451118 |
Sample_02_0680 | Embryo | H1 hESC-derived neural progenitor cells_Smad_48hr | 235 | 7 | 513 | 22 | 17 | 72 | 0 | CDH4 |
| SE_02_119301362 | chr20:61434519-61450433 |
Sample_02_1193 | Brain | GBM27 | 1362 | 7 | 488 | 21 | 15 | 68 | 0 | CDH4 |
| SE_02_075600323 | chr20:61434567-61452366 |
Sample_02_0756 | Embryo | ES-derived progenitors_FG FOXA2 -/- | 323 | 4 | 551 | 24 | 19 | 70 | 0 | CDH4 |
| SE_02_101600630 | chr20:61435175-61454573 |
Sample_02_1016 | Embryo | H9_Mesendoderm_24h | 630 | 5 | 585 | 25 | 19 | 79 | 0 | CDH4 |
| SE_02_104601606 | chr20:61508954-61563815 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 1606 | 18 | 2084 | 37 | 10 | 115 | 0 | CDH4 |
| SE_02_080100547 | chr20:61555215-61559059 |
Sample_02_0801 | Brain | 2235 | 547 | 2 | 133 | 1 | 0 | 29 | 0 | CDH4 |
Genomic distribution of SEs associated with CDH4