SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000157211
Gene: CDCP2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:54132968-54153770 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_083400853 chr1:54069712-54107240 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 853 6 800 71 3 200 481 TCEANC2,MIR4781,TMEM59,CDCP2
SE_02_083700775 chr1:54069936-54107280 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 775 10 794 71 3 200 481 TCEANC2,MIR4781,TMEM59,CDCP2
SE_02_111900568 chr1:54070500-54138602 Sample_02_1119 Blood KBM7 568 19 1680 139 4 227 745 TCEANC2,MIR4781,TMEM59,CDCP2
SE_02_007200311 chr1:54107732-54122335 Sample_02_0072 Lung NCI-H82_DMSO 311 4 386 34 1 0 264 CDCP2
SE_02_044000580 chr1:54118152-54138933 Sample_02_0440 Bone LM7 580 9 633 43 1 29 17 CDCP2
SE_00_005300852 chr1:54134837-54138580 Sample_00_0053 Embryo trophoblast cell originated from H1 852 2 91 3 0 16 0 CDCP2
SE_02_104602657 chr1:54158139-54181355 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2657 9 679 42 4 37 651 CYB5RL,MRPL37,CDCP2
SE_02_037600375 chr1:54163123-54174131 Sample_02_0376 Skeletal muscle RMS237 375 3 334 23 3 19 276 CYB5RL,MRPL37,CDCP2
SE_02_051700855 chr1:54199356-54229912 Sample_02_0517 Esophagus TE5 855 9 908 84 3 101 1264 SSBP3,CYB5RL,MRPL37,SSBP3-AS1,CDCP2
SE_02_087500967 chr1:54201596-54249156 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 967 16 1476 126 4 146 1451 SSBP3-AS1,MRPL37,SSBP3,CYB5RL,CDCP2
SE_02_104900066 chr1:54202062-54425074 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 66 163 6799 288 30 993 2283 SSBP3-AS1,MRPL37,SSBP3,CYB5RL,CDCP2
SE_02_109500192 chr1:54202090-54232053 Sample_02_1095 Blood CD34 Erythroid cells_Don002 192 9 905 88 4 93 1066 SSBP3,MRPL37,SSBP3-AS1,CYB5RL,CDCP2
SE_02_138700076 chr1:54202183-54410198 Sample_02_1387 Peripheral blood Mac-1_ALK- 76 107 6324 247 28 978 2283 SSBP3-AS1,MRPL37,SSBP3,CYB5RL,CDCP2
SE_02_149200868 chr1:54202391-54249014 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 868 14 1462 124 4 146 1451 SSBP3-AS1,MRPL37,SSBP3,CYB5RL,CDCP2
SE_02_142400291 chr1:54202832-54229801 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 291 4 830 80 2 90 1066 SSBP3,MRPL37,SSBP3-AS1,CYB5RL,CDCP2
Genomic distribution of SEs associated with CDCP2
Genome Browser

The strength of the tissue affected by the gene

Expression of CDCP2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)