Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000156261
Gene: CCT8 Gene type: protein_coding
Strand: - External links:
Genomic region: chr21:29055805-29073797 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_012400743 chr21:29001950-29026182 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 743 4 614 56 1 45 450 USP16,RWDD2B,CCT8,LTN1
SE_00_003100692 chr21:29001952-29025666 Sample_00_0031 Placenta placenta 692 4 601 56 1 45 431 USP16,RWDD2B,CCT8,LTN1,BACH1,AP3K7CL
SE_02_093000765 chr21:29002351-29024554 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 765 13 555 54 1 34 342 RWDD2B,USP16,LTN1,CCT8,MAP3K7CL,N6AMT1,BACH1
SE_02_057900451 chr21:29017323-29026909 Sample_02_0579 Blood HEL_sgNeg2 451 3 233 23 1 11 226 RWDD2B,USP16,LTN1,CCT8
SE_02_103300629 chr21:29017355-29027546 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 629 2 245 24 1 11 226 RWDD2B,USP16,LTN1,CCT8,MAP3K7CL
SE_02_053300597 chr21:29027155-29090357 Sample_02_0533 Blood vessel Circle of Willis_54y 597 19 1641 121 1 134 1452 MAP3K7CL,CCT8,USP16,RWDD2B,LTN1
SE_02_130400267 chr21:29052531-29127097 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 267 23 1935 232 4 139 1227 USP16,MAP3K7CL,CCT8,RWDD2B
SE_02_045300286 chr21:29053035-29091584 Sample_02_0453 Neuroblastoma SJNB3 286 4 1012 90 1 81 993 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_154400209 chr21:29056005-29090385 Sample_02_1544 Gastrointestinal Stromal GIST-882 209 9 898 82 1 69 903 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_122300522 chr21:29056597-29081309 Sample_02_1223 Bone marrow KMS28BM 522 11 642 47 0 52 777 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_058200468 chr21:29059382-29080403 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 468 4 544 38 0 52 703 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_045900643 chr21:29059427-29081828 Sample_02_0459 Blood ME-1_DMSO_6h 643 5 573 41 0 52 774 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_062200473 chr21:29061865-29080659 Sample_02_0622 Blood EOL1_Naive 473 9 479 34 0 42 653 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_099400498 chr21:29062632-29080411 Sample_02_0994 Blood MOLM13_SIK3TQ 498 10 453 34 0 32 567 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_099500782 chr21:29062653-29079768 Sample_02_0995 Blood MOLM-13_empty vector 782 13 439 34 0 32 556 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_057700644 chr21:29062879-29080025 Sample_02_0577 Blood MOLM13_empty 644 5 436 34 0 32 549 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_142900996 chr21:29063697-29084609 Sample_02_1429 Blood GM12878_WT 996 5 518 55 0 30 586 MAP3K7CL,CCT8,USP16,RWDD2B,N6AMT1,LTN1
SE_02_046100369 chr21:29063809-29080599 Sample_02_0461 Blood MV-4-11-B cells 369 11 414 33 0 28 548 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_046300144 chr21:29064176-29100644 Sample_02_0463 Blood OCI-AML3 cells 144 21 919 109 3 67 809 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_078400961 chr21:29064517-29089789 Sample_02_0784 Blood OSU-CLL 961 4 634 64 1 42 672 MAP3K7CL,CCT8,USP16,RWDD2B
SE_02_048101777 chr21:29070025-29128046 Sample_02_0481 Mammary gland MDA-MB231 1777 11 1488 212 4 88 792 MAP3K7CL,CCT8,USP16
SE_02_057600424 chr21:29070294-29089948 Sample_02_0576 Blood HEL_sgLKB1e2 424 8 498 53 1 23 520 MAP3K7CL,CCT8,USP16
SE_02_058000350 chr21:29070796-29081249 Sample_02_0580 Blood HEL_sgSIK3e4 350 6 258 22 0 7 417 MAP3K7CL,CCT8,USP16
SE_02_046000501 chr21:29070993-29101420 Sample_02_0460 Blood ME-1_I-10-49_6h 501 6 774 99 3 46 640 MAP3K7CL,CCT8,USP16
SE_02_085400195 chr21:29071010-29118236 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 195 7 1213 168 4 81 685 MAP3K7CL,CCT8,USP16
SE_02_064501506 chr21:29071042-29075836 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1506 2 126 17 0 7 220 CCT8,USP16,MAP3K7CL
SE_02_076900668 chr21:29071160-29105816 Sample_02_0769 Ovary HEYA8 668 11 882 115 3 50 640 MAP3K7CL,CCT8,USP16
SE_02_096500487 chr21:29071166-29099077 Sample_02_0965 Brain H3.3K27M_HSJ031-C3-Rx_cells 487 6 717 90 3 46 640 MAP3K7CL,CCT8,USP16
SE_02_088200845 chr21:29071184-29115861 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 845 6 1168 163 3 61 685 MAP3K7CL,CCT8,USP16
SE_02_057900344 chr21:29071216-29081287 Sample_02_0579 Blood HEL_sgNeg2 344 3 251 21 0 7 417 MAP3K7CL,CCT8,USP16
SE_02_088300756 chr21:29071269-29116582 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 756 6 1185 165 3 63 685 MAP3K7CL,CCT8,USP16
SE_02_058400407 chr21:29071320-29080740 Sample_02_0584 Lung H1299 WT 407 3 235 19 0 7 401 MAP3K7CL,CCT8,USP16
SE_02_143201588 chr21:29071569-29090783 Sample_02_1432 Bone A673 STAG2 WT 1588 3 503 57 1 22 503 MAP3K7CL,CCT8,USP16
SE_02_065001185 chr21:29071699-29074313 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 1185 1 79 12 0 7 220 CCT8,USP16,MAP3K7CL
SE_02_087900690 chr21:29080654-29132525 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 690 6 1349 200 5 120 454 MAP3K7CL,CCT8
SE_02_036400199 chr21:29089975-29151760 Sample_02_0364 Skeletal muscle CTR 199 17 1600 238 6 186 490 C21ORF7,NCRNA00189,CCT8
SE_02_108100166 chr21:29093536-29155722 Sample_02_1081 Muscle CTR shCtrl 166 26 1594 235 7 190 353 MAP3K7CL,CCT8,LINC00189
SE_02_087700275 chr21:29094124-29150446 Sample_02_0877 Muscle SMS-CTR_CASZ1b_Dox 275 20 1449 214 6 168 353 MAP3K7CL,CCT8,LINC00189
SE_02_130300532 chr21:29097260-29128011 Sample_02_1303 Lymphoma RL_tazemetostat 532 8 785 128 3 44 120 MAP3K7CL,CCT8
SE_02_155200052 chr21:29113381-29260762 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 52 43 3742 520 19 347 679 LINC00189,MAP3K7CL,BACH1,CCT8
SE_02_053400144 chr21:29115036-29207960 Sample_02_0534 Blood vessel Circle of Willis_60y 144 27 2429 397 13 282 659 LINC00189,MAP3K7CL,CCT8

Genomic distribution of SEs associated with CCT8

The strength of the tissue affected by the gene


Expression of CCT8