SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000100299
Gene: ARSA Gene type: protein_coding
Strand: - External links:
Genomic region: chr22:50622754-50628173 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_076500275 chr22:50598295-50628157 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 275 11 912 126 2 173 2959 MAPK8IP2,ARSA,CHKB-AS1,SYCE3,CPT1B,CHKB,SHANK3
SE_02_039601890 chr22:50603048-50642428 Sample_02_0396 Skin NHEK-D 1890 10 1231 159 3 160 2721 MAPK8IP2,ARSA,C22ORF41,CHKB,LOC100144603,CPT1B,SHANK3
SE_02_104602194 chr22:50607617-50642659 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2194 10 1100 147 3 104 1741 MAPK8IP2,ARSA,CHKB-AS1,SYCE3,CPT1B,CHKB,SHANK3
SE_02_104700900 chr22:50613030-50642286 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 900 8 913 124 3 78 1323 ARSA,CHKB-AS1,CPT1B,CHKB,MAPK8IP2,SHANK3
SE_02_104900773 chr22:50613094-50634082 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 773 13 657 94 3 70 1323 ARSA,CHKB-AS1,CPT1B,CHKB,MAPK8IP2,SHANK3
SE_02_016300304 chr22:50613254-50623663 Sample_02_0163 Prostate C4-2B_SR2211_24h 304 3 304 40 0 2 192 ARSA,CHKB,CPT1B,MAPK8IP2,LOC100144603
SE_02_147100128 chr22:50620178-50705835 Sample_02_1471 Blood Outgrowth Endothelia BOEC 128 10 2548 226 8 319 2981 SHANK3,ARSA,CHKB-AS1,CPT1B,CHKB,MAPK8IP2,ACR
SE_02_093400681 chr22:50640143-50644373 Sample_02_0934 Embryo H7-WT 681 2 124 18 0 10 0 MAPK8IP2,SHANK3,ARSA
SE_02_089000391 chr22:50640425-50715597 Sample_02_0890 Heart left ventricle_LV1200 391 19 2267 158 5 271 2022 SHANK3,MAPK8IP2,RPL23AP82,ACR,ARSA,CPT1B,SYCE3
SE_02_151900137 chr22:50640500-50700382 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 137 16 1712 127 4 215 1307 SHANK3,MAPK8IP2,ARSA,ACR,RABL2B,CHKB
SE_02_152000067 chr22:50640507-50685779 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 67 14 1311 101 4 162 875 SHANK3,MAPK8IP2,ARSA,RABL2B,CHKB
SE_02_088800505 chr22:50640684-50731952 Sample_02_0888 Heart left ventricle_LV1160 505 23 2700 184 5 487 3234 SHANK3,MAPK8IP2,RPL23AP82,ACR,ARSA,CPT1B,SYCE3
SE_02_089600440 chr22:50640805-50715624 Sample_02_0896 Heart left ventricle_LV1294 440 19 2251 154 5 271 2031 SHANK3,MAPK8IP2,RPL23AP82,ACR,ARSA,CPT1B,SYCE3
SE_02_083100140 chr22:50640995-50684724 Sample_02_0831 Umblical vein HUVECs_TNF0min 140 8 1258 90 4 162 846 SHANK3,MAPK8IP2,ARSA,RABL2B,CHKB
SE_02_046500857 chr22:50641000-50698153 Sample_02_0465 Adipose subcutaneous adipocytes 857 17 1601 118 4 194 1203 SHANK3,MAPK8IP2,ARSA,ACR,CPT1B,CHKB
SE_02_095000386 chr22:50641156-50699022 Sample_02_0950 Umbilical vein HUVEC_WT 386 11 1629 119 4 209 1307 SHANK3,MAPK8IP2,ARSA,ACR,RABL2B,CHKB
SE_02_058500539 chr22:50655188-50678089 Sample_02_0585 Umbilical vein HUVEC 0hour 539 4 606 48 3 104 437 SHANK3,ARSA,RABL2B,CHKB
SE_02_089900242 chr22:50655230-50715612 Sample_02_0899 Heart left ventricle_LV1400 242 17 1862 120 5 261 2025 SHANK3,RPL23AP82,ACR,ARSA,CPT1B,SYCE3
SE_02_082300213 chr22:50655249-50685820 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 213 3 907 63 4 152 875 SHANK3,ARSA
SE_02_151800075 chr22:50655269-50700866 Sample_02_1518 Umbilical vein HUVEC_Scr 75 14 1321 90 4 205 1307 SHANK3,ARSA,ACR,RABL2B,CHKB
SE_02_083200192 chr22:50655284-50677665 Sample_02_0832 Umblical vein HUVECs_TNF30min 192 4 596 48 3 103 437 SHANK3,ARSA,RABL2B,CHKB
SE_00_002200963 chr22:50655395-50679093 Sample_00_0022 Lung lung_30y 963 4 637 49 3 122 589 SHANK3,ARSA
SE_02_082200229 chr22:50655468-50685663 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 229 6 899 63 4 152 875 SHANK3,ARSA
SE_00_004000237 chr22:50655475-50734643 Sample_00_0040 Spleen spleen_30y 237 22 2376 150 6 510 3551 SHANK3,ARSA,RABL2B,RPL23AP82,ACR,CHKB,APK8IP2,ODF3B
SE_02_090600588 chr22:50655526-50715801 Sample_02_0906 Heart left ventricle_DCM_LV1072 588 20 1859 120 5 265 2085 SHANK3,RPL23AP82,ACR,ARSA
SE_02_091500775 chr22:50655527-50686641 Sample_02_0915 Heart left ventricle_DCM_LV1371 775 10 906 63 4 152 875 SHANK3,ARSA
SE_02_090801525 chr22:50655659-50714496 Sample_02_0908 Heart left ventricle_DCM_LV1262 1525 16 1805 118 5 257 1873 SHANK3,RPL23AP82,ACR,ARSA
SE_02_104600412 chr22:50656090-50748907 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 412 29 2854 186 8 556 4554 ACR,SHANK3,RPL23AP82,RABL2B,ARSA
SE_02_057601239 chr22:50662854-50692280 Sample_02_0576 Blood HEL_sgLKB1e2 1239 7 864 53 4 140 875 SHANK3,ARSA,ACR
SE_02_082100477 chr22:50669800-50692447 Sample_02_0821 Haematopoietic and lymphoid tissue SET-2_WT_GSK-LSD1 477 6 668 40 2 133 875 SHANK3,ARSA,ACR
SE_02_083600623 chr22:50669949-50688017 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 623 6 551 34 2 131 875 SHANK3,ARSA
SE_02_083500765 chr22:50670495-50688247 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 765 3 538 33 2 131 875 SHANK3,ARSA,ACR
SE_02_083400631 chr22:50670512-50692510 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 631 8 648 39 2 133 875 SHANK3,ARSA,ACR
SE_02_083301050 chr22:50670557-50688283 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 1050 6 537 33 2 131 875 SHANK3,ARSA,ACR
SE_00_005500323 chr22:50670564-50733983 Sample_00_0055 Spleen spleen 34y 323 41 1934 115 4 488 3551 SHANK3,RPL23AP82,RABL2B,ARSA,ACR,MAPK8IP2,CHKB,ODF3B,TYMP,NCAPH2
SE_02_083700662 chr22:50670567-50691533 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 662 6 618 38 2 133 875 SHANK3,ARSA,ACR
SE_02_146900422 chr22:50670593-50705923 Sample_02_1469 Umbilical Vein HUVEC 422 6 1072 62 3 217 1666 SHANK3,ARSA,ACR,RABL2B,CHKB
SE_02_039600886 chr22:50670666-50745103 Sample_02_0396 Skin NHEK-D 886 14 2330 141 6 531 4505 ACR,SHANK3,ARSA,RABL2B,RPL23AP82
SE_00_004600493 chr22:50670699-50722464 Sample_00_0046 Heart right ventricle_34y 493 21 1629 97 3 353 2814 SHANK3,RPL23AP82,ACR,ARSA,MAPK8IP2,CHKB,SYCE3
SE_02_048400454 chr22:50671523-50686911 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 454 5 468 29 2 129 875 SHANK3,ARSA
SE_02_104700614 chr22:50671804-50749107 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 614 22 2424 151 6 531 4554 ACR,SHANK3,RPL23AP82,RABL2B,ARSA
Genomic distribution of SEs associated with ARSA
Genome Browser

The strength of the tissue affected by the gene

Expression of ARSA

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)