SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000136950
Gene: ARPC5L Gene type: protein_coding
Strand: + External links:
Genomic region: chr9:124862130-124877733 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_101700064 chr9:124694407-124842044 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 64 27 4175 180 5 393 2254 OLFML2A,NR6A1,MIR181A2HG,ARPC5L,MIR181A2,WDR38,RPL35,MIR181B2
SE_02_101600028 chr9:124694973-124840649 Sample_02_1016 Embryo H9_Mesendoderm_24h 28 20 4096 173 5 391 2254 OLFML2A,NR6A1,MIR181A2HG,ARPC5L,MIR181A2,WDR38,RPL35,MIR181B2
SE_02_101500073 chr9:124734188-124821140 Sample_02_1015 Embryo H9_ Undifferentiated 73 17 2364 76 5 326 2169 OLFML2A,NR6A1,ARPC5L,WDR38,RPL35,MIR181B2,MIR181A2
SE_01_010100839 chr9:124753819-124840617 Sample_01_0101 Pancreas pancreas_54y 839 17 2526 142 4 318 2169 OLFML2A,NR6A1,ARPC5L,RPL35,WDR38
SE_02_102900439 chr9:124769059-124842077 Sample_02_1029 Colon HCT116 439 22 2228 142 4 255 2169 OLFML2A,NR6A1,ARPC5L,RPL35,WDR38
SE_00_004000269 chr9:124770865-124840528 Sample_00_0040 Spleen spleen_30y 269 23 2096 134 4 210 2150 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35,OLFL2A
SE_00_002500161 chr9:124771156-124853181 Sample_00_0025 Muscle of leg muscle-of-leg 161 18 2519 177 5 214 2058 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_00_002600088 chr9:124771320-124852889 Sample_00_0026 Muscle of trunk muscle-of-trunk 88 15 2504 176 5 209 2013 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_044300282 chr9:124774224-124840562 Sample_02_0443 Bone MG63 282 36 2011 131 2 164 1981 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_01_008800369 chr9:124774314-124850606 Sample_01_0088 Tibial nerve tibial-nerve 369 14 2353 164 2 166 1981 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_150200450 chr9:124774664-124839821 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 450 16 1975 127 2 164 1981 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_044200417 chr9:124774683-124839972 Sample_02_0442 Bone MG63.3 417 25 1973 127 2 164 1981 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_141300147 chr9:124774706-124859771 Sample_02_1413 Muscle RH4_sgBRG1 147 23 2660 200 3 201 2813 OLFML2A,WDR38,RPL35,ARPC5L,NR6A1
SE_02_107900064 chr9:124776352-124842152 Sample_02_1079 Muscle RMS246_PAX3-NCOA1 64 20 2012 137 2 164 1981 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_038000270 chr9:124776383-124851140 Sample_02_0380 Skeletal muscle RH18 270 12 2298 165 3 166 1981 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_037000183 chr9:124777230-124842526 Sample_02_0370 Skeletal muscle RH4 183 10 2001 137 2 164 1897 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_074000146 chr9:124777253-124844014 Sample_02_0740 Muscle RH3 146 17 2051 141 2 166 1889 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_037400045 chr9:124777270-124853088 Sample_02_0374 Skeletal muscle RMS209 45 15 2356 173 3 170 1885 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_105800589 chr9:124778314-124840497 Sample_02_1058 Bone A673_SA2 Rescue 589 16 1898 129 2 162 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_150100430 chr9:124778383-124840628 Sample_02_1501 Brain SHEP-21N_NOSPIKE 430 14 1900 130 2 162 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_074100047 chr9:124778532-124841579 Sample_02_0741 Muscle RH30 47 13 1931 133 2 162 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_061100061 chr9:124778580-124843875 Sample_02_0611 Liposarcoma DDLPS_T1 61 30 2013 141 2 162 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_01_006100097 chr9:124778624-124835779 Sample_01_0061 Prostate RWPE1 97 8 1626 102 2 162 1804 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_01_011500444 chr9:124778717-124850521 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 444 19 2235 163 2 164 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_157300923 chr9:124778850-124835308 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 923 16 1609 101 2 158 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_021100681 chr9:124778860-124822252 Sample_02_0211 Lung MRC-5_NFD_1DPT 681 10 1241 54 2 151 1804 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_158401382 chr9:124778928-124835601 Sample_02_1584 Brain U87 GBM_Mock 1382 8 1611 102 2 161 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_111100365 chr9:124779027-124840264 Sample_02_1111 Other HGrC1_SMAD2/3KO 365 14 1869 127 2 162 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_00_005500414 chr9:124779067-124833262 Sample_00_0055 Spleen spleen 34y 414 18 1530 94 2 158 1804 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_103000467 chr9:124792126-124843154 Sample_02_1030 Colon DKO 467 18 1616 133 1 113 1690 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_064000724 chr9:124792981-124819252 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 724 8 768 43 1 86 1690 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_136200354 chr9:124794775-124821423 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 354 10 780 44 1 101 1690 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_154000192 chr9:124795148-124835892 Sample_02_1540 Nasopharyngeal HK1 192 10 1175 94 1 113 1619 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_136100402 chr9:124795223-124820794 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 402 9 750 44 1 91 1595 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_049200946 chr9:124795717-124820217 Sample_02_0492 Pharyng Detroit 562_LPS 946 9 722 42 1 86 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_049100695 chr9:124795804-124835827 Sample_02_0491 Pharyng Detroit 562-Control 695 9 1151 91 1 113 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_084001235 chr9:124795891-124840571 Sample_02_0840 Embryo hNPCs_R1159Q/+ 1235 10 1412 119 1 113 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_00_005300172 chr9:124795893-124819423 Sample_00_0053 Embryo trophoblast cell originated from H1 172 7 683 40 1 86 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_108000423 chr9:124796423-124841125 Sample_02_1080 Muscle JR1 shCtrl 423 8 1417 120 1 105 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_092100518 chr9:124797430-124853090 Sample_02_0921 Heart embryonic heart_CS22 518 16 1800 160 2 111 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_092400752 chr9:124797444-124840656 Sample_02_0924 Heart fetal heart_PCW10_12569 752 10 1372 118 1 105 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_064200769 chr9:124797853-124819253 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 769 5 626 37 1 78 1570 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_021600270 chr9:124800487-124840905 Sample_02_0216 Skin NHEK_scramble 270 15 1284 115 0 95 1442 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_079800368 chr9:124801924-124835501 Sample_02_0798 Brain 1919 368 11 939 81 0 79 1218 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_108100280 chr9:124803751-124841961 Sample_02_1081 Muscle CTR shCtrl 280 15 1226 113 0 76 1218 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_047900647 chr9:124804551-124835342 Sample_02_0479 Head and neck SCC25 647 13 857 76 0 70 1075 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_103602762 chr9:124804796-124850871 Sample_02_1036 Mammary gland HCC70_XY018 2762 11 1482 138 0 76 1075 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_113200307 chr9:124805143-124843827 Sample_02_1132 Pancreas KLM1 wt 307 15 1238 115 0 74 1075 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_094500013 chr9:124807573-124864509 Sample_02_0945 Brain SF767 13 12 1859 177 1 115 2259 OLFML2A,WDR38,RPL35,ARPC5L,NR6A1
SE_02_010500844 chr9:124807677-124820232 Sample_02_0105 Skin neonatal_keratinocytes 844 3 359 26 0 44 1064 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_112100801 chr9:124807938-124819484 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 801 10 316 24 0 33 1006 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_102500129 chr9:124808049-124840494 Sample_02_1025 Esophagus KYSE150 129 6 1036 102 0 59 968 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_061900309 chr9:124808144-124821334 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 309 1 370 27 0 47 945 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_136000517 chr9:124808449-124820174 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 517 5 317 23 0 32 945 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_042300609 chr9:124809055-124835767 Sample_02_0423 Skin A375 609 13 737 71 0 59 945 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_048101696 chr9:124809063-124835482 Sample_02_0481 Mammary gland MDA-MB231 1696 10 727 70 0 58 945 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_006900422 chr9:124809179-124835759 Sample_02_0069 Brain SF268 422 4 735 71 0 59 945 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_084600733 chr9:124809587-124834434 Sample_02_0846 Mammary gland MDA-MB-231_untreat 733 5 672 67 0 54 945 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_158000699 chr9:124809674-124835712 Sample_02_1580 Renal 786-O 699 4 714 69 0 58 938 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_036900321 chr9:124809842-124842274 Sample_02_0369 Skeletal muscle RD 321 4 1053 104 0 58 899 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_037900321 chr9:124809842-124842274 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 321 4 1053 104 0 58 899 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_006800493 chr9:124809863-124835775 Sample_02_0068 Skin A375_DMSO 493 7 712 69 0 57 896 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_043600523 chr9:124809868-124836165 Sample_02_0436 Kidney HEK293A_empty-vector_DMSO_6h 523 3 735 72 0 57 896 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_096300721 chr9:124810028-124835739 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 721 5 708 69 0 53 869 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_031600611 chr9:124810034-124836132 Sample_02_0316 Neuroblastoma CHP212 611 5 727 72 0 53 869 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_016700599 chr9:124810036-124819951 Sample_02_0167 Mammary gland HCC1954_LCC2 599 2 268 20 0 26 869 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_114900279 chr9:124810119-124835353 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 279 4 692 68 0 46 848 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_094800336 chr9:124810127-124820327 Sample_02_0948 Pharyng Detroit562 336 2 274 21 0 23 848 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_094700166 chr9:124810170-124835749 Sample_02_0947 Tongue Cal27 166 4 703 69 0 45 839 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_061001385 chr9:124810211-124819568 Sample_02_0610 Liposarcoma MLS 1765-92 1385 2 246 19 0 16 833 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_126501336 chr9:124810217-124835715 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 1336 4 700 69 0 43 831 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_061500781 chr9:124810219-124835732 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 781 5 701 69 0 43 830 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_152200333 chr9:124810233-124861961 Sample_02_1522 Skin A375 RTKi 333 12 1702 168 1 86 1880 OLFML2A,WDR38,RPL35,ARPC5L,NR6A1
SE_02_040600454 chr9:124810243-124821466 Sample_02_0406 Mammary gland ZR-75-30_parental 454 5 308 21 0 31 827 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_044000434 chr9:124810268-124835631 Sample_02_0440 Bone LM7 434 8 697 69 0 41 824 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_135900671 chr9:124810287-124835678 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 671 8 696 69 0 40 821 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_126200905 chr9:124810290-124819345 Sample_02_1262 Bone Im-GCT-3504_G34W 905 2 241 18 0 12 819 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_135700430 chr9:124810296-124835599 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 430 10 694 69 0 38 818 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_132201396 chr9:124810304-124819357 Sample_02_1322 Connective Tissue HT1080_WT 1396 2 240 18 0 12 817 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_135800384 chr9:124810316-124835664 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 384 9 695 69 0 38 816 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_022700238 chr9:124810317-124819657 Sample_02_0227 Oesophagus TE7 238 5 251 19 0 12 816 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_050700264 chr9:124810335-124819996 Sample_02_0507 Esophagus TE7_1 264 8 261 20 0 9 810 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_103700624 chr9:124810346-124819693 Sample_02_1037 Pharynx FaDu Control 624 3 253 19 0 9 805 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_053400625 chr9:124810403-124852841 Sample_02_0534 Blood vessel Circle of Willis_60y 625 8 1394 139 1 41 795 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_133700262 chr9:124810468-124835618 Sample_02_1337 Lung NCI-H1299-wtSMARCA4_Dox_SAHA 262 7 687 69 0 34 782 OLFML2A,ARPC5L,RPL35,WDR38,NR6A1
SE_02_053300863 chr9:124810617-124854208 Sample_02_0533 Blood vessel Circle of Willis_54y 863 13 1426 150 1 45 935 OLFML2A,WDR38,ARPC5L,RPL35,NR6A1
SE_02_026600239 chr9:124811088-124819767 Sample_02_0266 Bronchial HBE_Primary human bronchial epithelial cells_ 239 5 223 20 0 8 638 OLFML2A,NR6A1,WDR38,ARPC5L,RPL35
SE_02_039601880 chr9:124855318-124864542 Sample_02_0396 Skin NHEK-D 1880 1 294 13 0 32 938 WDR38,RPL35,ARPC5L
SE_02_074501094 chr9:124856029-124867100 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1094 3 338 16 0 18 818 WDR38,RPL35,ARPC5L
Genomic distribution of SEs associated with ARPC5L
Genome Browser

The strength of the tissue affected by the gene

Expression of ARPC5L

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)