Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000111701
Gene: APOBEC1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:7649400-7665908 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_044600717 chr12:7583555-7618764 Sample_02_0446 Bone osteosarcoma tumor P2 717 8 927 132 0 0 0 APOBEC1
SE_02_148000986 chr12:7606925-7645873 Sample_02_1480 Bone MHH-ES-1 986 13 1126 115 1 0 0 GDF3,APOBEC1
SE_02_075300339 chr12:7616208-7644394 Sample_02_0753 Embryo ES-derived progenitors_FG type 339 11 850 83 1 0 0 APOBEC1,DPPA3
SE_02_075700364 chr12:7622686-7644246 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 364 5 685 43 1 0 0 APOBEC1
SE_02_075400576 chr12:7623681-7638753 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 576 4 421 31 0 0 0 APOBEC1
SE_02_012400231 chr12:7677182-7714968 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 231 4 1105 82 13 0 348 DPPA3,GDF3,CLEC4C,APOBEC1
SE_02_157001225 chr12:7693356-7718289 Sample_02_1570 iPSCs EiPSC 1225 7 667 50 10 0 349 DPPA3,GDF3,CLEC4C,APOBEC1,NANOGNB
SE_02_143400714 chr12:7697631-7711587 Sample_02_1434 Trophoblast trophoblast stem cells 714 3 396 23 5 0 33 DPPA3,GDF3,APOBEC1,CLEC4C

Genomic distribution of SEs associated with APOBEC1

The strength of the tissue affected by the gene


Expression of APOBEC1