SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000072818
Gene: ACAP1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:7336529-7351477 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_010900442 chr17:7256763-7293146 Sample_01_0109 Colon transverse colon_54y 442 10 1006 90 5 249 3073 ELP5,SLC2A4,CLDN7,YBX2,EIF5A,GABARAP,ACADVL,DLG4,GPS2,PHF23,MIR324,CTDNEP1,ACAP1,NEURL4,DVL2
SE_02_036800463 chr17:7279423-7294427 Sample_02_0368 Skeletal muscle NS134 463 1 397 31 4 213 2208 SLC2A4,YBX2,CLDN7,EIF5A,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4
SE_00_001100612 chr17:7279951-7309877 Sample_00_0011 Esophagus esophagus 612 5 790 79 4 417 2829 SLC2A4,YBX2,EIF5A,TMEM95,CLDN7,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4,KCTD11
SE_00_003200186 chr17:7279979-7309742 Sample_00_0032 Psoas muscle psoas-muscle_30y 186 5 785 79 4 414 2812 SLC2A4,YBX2,EIF5A,TMEM95,CLDN7,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4,KCTD11
SE_00_004101208 chr17:7279983-7310299 Sample_00_0041 Stomach stomach_3y 1208 5 809 81 4 417 2885 SLC2A4,YBX2,EIF5A,TMEM95,CLDN7,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4,KCTD11
SE_01_009700765 chr17:7280041-7293531 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 765 1 362 30 4 189 2049 YBX2,SLC2A4,EIF5A,CLDN7,PHF23,DVL2,ELP5,ACAP1,NEURL4,CTDNEP1,GPS2,GABARAP
SE_00_003400582 chr17:7280055-7309679 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 582 4 780 77 4 409 2804 SLC2A4,YBX2,EIF5A,TMEM95,CLDN7,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4,KCTD11
SE_00_002100697 chr17:7280342-7309727 Sample_00_0021 Lung lung_3y 697 3 771 75 4 413 2810 SLC2A4,YBX2,EIF5A,TMEM95,CLDN7,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4,KCTD11
SE_00_004600527 chr17:7280362-7296765 Sample_00_0046 Heart right ventricle_34y 527 8 401 33 4 260 2317 YBX2,SLC2A4,EIF5A,CLDN7,PHF23,DVL2,ELP5,ACAP1,NEURL4,CTDNEP1,GPS2,GABARAP
SE_02_001600550 chr17:7280672-7311083 Sample_02_0016 Blood erythroblasts 550 3 818 80 3 420 2943 SLC2A4,YBX2,EIF5A,TMEM95,CLDN7,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4,KCTD11
SE_02_001700560 chr17:7281500-7309395 Sample_02_0017 Embryo H9_ESC 560 4 736 72 2 390 2772 SLC2A4,YBX2,EIF5A,TMEM95,CLDN7,GPS2,C17ORF81,CTDNEP1,GABARAP,DVL2,PHF23,ACAP1,NEURL4,KCTD11
SE_01_001200463 chr17:7295670-7316743 Sample_01_0012 Lung A549_dexamethasone_1h 463 3 639 60 0 266 1701 NEURL4,EIF5A,GPS2,TMEM95,CLDN7,C17ORF81,CTDNEP1,YBX2,KCTD11,ACAP1,SLC2A4
SE_02_061700958 chr17:7296123-7313765 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 958 4 526 53 0 214 1150 EIF5A,GPS2,CLDN7,ELP5,SLC2A4,ACAP1,TMEM95,NEURL4,KCTD11,CTDNEP1,YBX2
SE_02_042700524 chr17:7305605-7316458 Sample_02_0427 Colon HCT116_shPAF1 524 2 350 22 0 260 1694 NEURL4,EIF5A,GPS2,TMEM95,CLDN7,YBX2,KCTD11,ACAP1,SLC2A4
SE_02_065900295 chr17:7305882-7328423 Sample_02_0659 Lung H23 295 10 650 55 0 469 3689 EIF5A,NEURL4,GPS2,CLDN7,SLC2A4,ACAP1,KCTD11,TMEM95,YBX2
SE_02_111200651 chr17:7306001-7318304 Sample_02_1112 T lymphocyte THP-6 T-ALL 651 1 398 31 0 283 1969 EIF5A,NEURL4,GPS2,CLDN7,SLC2A4,ACAP1,KCTD11,TMEM95,YBX2
SE_01_008400603 chr17:7306052-7317989 Sample_01_0084 Spleen spleen 603 4 384 27 0 274 1899 NEURL4,EIF5A,GPS2,TMEM95,CLDN7,YBX2,KCTD11,ACAP1,SLC2A4
SE_02_143100478 chr17:7306066-7316570 Sample_02_1431 Blood T cell 478 2 342 22 0 260 1701 EIF5A,NEURL4,GPS2,CLDN7,SLC2A4,ACAP1,KCTD11,TMEM95,YBX2
SE_00_002700761 chr17:7306074-7310746 Sample_00_0027 Blood natural-killer-cell 761 1 137 10 0 155 602 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4
SE_00_003901154 chr17:7306076-7309810 Sample_00_0039 Spleen spleen_3y 1154 1 95 5 0 155 501 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4,C17orf74,TNK1
SE_01_010700830 chr17:7306117-7313195 Sample_01_0107 Esophagus esophagus squamous epithelium 830 3 225 13 0 197 1051 EIF5A,GPS2,CLDN7,SLC2A4,ACAP1,NEURL4,KCTD11,TMEM95,YBX2
SE_00_004000788 chr17:7306213-7309653 Sample_00_0040 Spleen spleen_30y 788 1 93 5 0 146 483 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4,C17orf74,TNK1
SE_00_000700536 chr17:7306230-7312010 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 536 1 183 12 0 181 796 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4
SE_00_000900900 chr17:7306232-7311369 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 900 1 154 10 0 162 686 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4
SE_02_103400747 chr17:7306247-7310955 Sample_02_1034 Blood AML cell 747 2 147 10 0 155 613 EIF5A,CLDN7,SLC2A4,ACAP1,NEURL4,KCTD11,TMEM95,GPS2,YBX2
SE_02_039600905 chr17:7306287-7310432 Sample_02_0396 Skin NHEK-D 905 1 118 8 0 155 589 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4
SE_02_003601419 chr17:7306388-7309697 Sample_02_0036 Embryo H7 1419 1 86 5 0 149 487 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4
SE_00_000800603 chr17:7306416-7311933 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 603 1 174 12 0 177 776 EIF5A,TMEM95,CLDN7,GPS2,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4
SE_02_021200293 chr17:7308014-7315186 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 293 1 252 14 0 156 1161 EIF5A,GPS2,TMEM95,CLDN7,YBX2,KCTD11,ACAP1,NEURL4,SLC2A4
SE_02_103601088 chr17:7358478-7401660 Sample_02_1036 Mammary gland HCC70_XY018 1088 11 1310 116 6 153 2252 TNK1,PLSCR3,TMEM256-PLSCR3,ACAP1,KCTD11,FGF11,TMEM102,GPS2,NLGN2,SPEM1,TMEM95,NEURL4,CHRNB1,C17ORF74
SE_02_103502243 chr17:7383829-7401660 Sample_02_1035 Mammary gland HCC70_Vehicle 2243 5 539 54 4 108 1850 TNK1,PLSCR3,TMEM256-PLSCR3,ACAP1,KCTD11,FGF11,TMEM102,NLGN2,SPEM1,TMEM95,CHRNB1,C17ORF74
Genomic distribution of SEs associated with ACAP1
Genome Browser

The strength of the tissue affected by the gene

Expression of ACAP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)