SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: prestige Ensembl ID: ENSG00000109118
Gene: PHF12 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:28905250-28951771 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_068100160 chr17:28977766-29003558 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 160 12 668 49 4 192 323 SEZ6,PHF12,PIPOX
SE_02_068000264 chr17:28985157-29003465 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 264 10 479 38 3 127 0 SEZ6,PHF12,PIPOX
SE_02_067700339 chr17:29016787-29040225 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 339 6 664 60 0 184 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_067500100 chr17:29018584-29048952 Sample_02_0675 Embryo H1 hESC-derived neural progenitor cells_Smad_0hr 100 12 835 72 0 250 245 PIPOX,SEZ6,TIAF1,CRYBA1,PHF12
SE_02_068000106 chr17:29018627-29040459 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 106 17 612 54 0 177 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_068100172 chr17:29018907-29040183 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 172 9 595 52 0 177 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_067900340 chr17:29019791-29040130 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 340 9 579 50 0 175 0 SEZ6,TIAF1,PIPOX,CRYBA1,PHF12
SE_02_059400443 chr17:29030979-29052807 Sample_02_0594 iPSC-derived neural progenitors 443 1 584 50 0 212 251 PIPOX,SEZ6,TIAF1,PHF12
Genomic distribution of SEs associated with PHF12
Genome Browser

The strength of the tissue affected by the gene

Expression of PHF12

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)