Gene overview

Strategies/Algorithm: prestige Ensembl ID: ENSG00000103742
Gene: IGDCC4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr15:65381484-65422947 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_068100101 chr15:65333086-65369680 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 101 11 891 53 1 241 568 IGDCC3,RNU5B-1,PARP16,RNU5A-1,IGDCC4
SE_02_083800306 chr15:65354626-65369984 Sample_02_0838 Embryo hNPCs_WT 306 3 364 24 1 104 104 IGDCC3,RNU5B-1,IGDCC4,PARP16
SE_02_067800450 chr15:65355349-65368674 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 450 8 309 22 1 87 104 IGDCC3,IGDCC4,PARP16
SE_02_067900430 chr15:65355651-65369562 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 430 7 329 23 1 88 104 IGDCC3,IGDCC4,PARP16
SE_02_059400708 chr15:65400665-65424047 Sample_02_0594 iPSC-derived neural progenitors 708 5 660 47 5 96 641 IGDCC4,IGDCC3
SE_02_084000310 chr15:65400819-65422918 Sample_02_0840 Embryo hNPCs_R1159Q/+ 310 11 619 45 5 92 467 IGDCC4,IGDCC3
SE_02_083900834 chr15:65401176-65421506 Sample_02_0839 Embryo hNPCs_K755R/+ 834 9 565 41 4 79 330 IGDCC4,IGDCC3
SE_02_068000122 chr15:65401826-65421301 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 122 11 542 37 4 71 330 IGDCC4,IGDCC3
SE_02_068100142 chr15:65401929-65421316 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 142 6 539 37 4 73 330 IGDCC4,IGDCC3
SE_02_067900432 chr15:65402110-65417920 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 432 7 457 32 4 63 330 IGDCC4,IGDCC3

Genomic distribution of SEs associated with IGDCC4

The strength of the tissue affected by the gene


Expression of IGDCC4