SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000158545
Gene: ZC3H18 Gene type: protein_coding
Strand: + External links:
Genomic region: chr16:88570403-88631964 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104100097 chr16:88566487-88593784 Sample_02_1041 Peripheral blood CD4+ cells_CTCL1135 97 14 1073 59 1 49 552 ZC3H18,IL17C
SE_02_103601312 chr16:88567586-88578995 Sample_02_1036 Mammary gland HCC70_XY018 1312 3 443 22 1 31 357 ZC3H18
SE_02_138100477 chr16:88576544-88659708 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 477 27 3426 226 8 223 5615 ZC3H18,MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
SE_02_104000023 chr16:88578181-88653372 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 23 43 3060 198 7 169 4402 ZC3H18,MVD,IL17C,CYBA,SNAI3-AS1,SNAI3
SE_02_082600473 chr16:88587413-88654682 Sample_02_0826 Stomach gastric tumor 473 23 2763 191 7 165 4413 ZC3H18,MVD,IL17C,CYBA,RNF166,SNAI3-AS1,SNAI3
SE_01_008400321 chr16:88589248-88654227 Sample_01_0084 Spleen spleen 321 11 2680 185 7 154 4312 ZC3H18,CYBA,IL17C,MVD,SNAI3,MGC23284,RNF166
SE_02_073900537 chr16:88596029-88658632 Sample_02_0739 Blood Nalm6 537 17 2621 185 8 188 5205 ZC3H18,MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
SE_02_057300272 chr16:88597679-88658280 Sample_02_0573 Blood Nalm6_1 272 14 2543 179 8 188 5179 ZC3H18,MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
SE_02_088500564 chr16:88597909-88635400 Sample_02_0885 Blood NALM6_2 564 8 1423 102 6 104 1716 ZC3H18,IL17C,SNAI3-AS1,CYBA,MVD
SE_02_055200298 chr16:88607601-88659907 Sample_02_0552 Other SYO1 shCt 298 13 2277 148 8 167 5047 ZC3H18,MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
SE_02_045500550 chr16:88615086-88636969 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 550 9 878 53 5 69 1306 ZC3H18,IL17C,SNAI3-AS1,SNAI3,CYBA,MVD
SE_02_104100074 chr16:88615692-88635283 Sample_02_1041 Peripheral blood CD4+ cells_CTCL1135 74 18 802 48 4 69 1306 ZC3H18,IL17C,SNAI3-AS1,CYBA,MVD
SE_02_045400821 chr16:88615782-88653617 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 821 8 1696 107 6 119 3902 ZC3H18,MVD,IL17C,CYBA,RNF166,SNAI3-AS1,SNAI3
SE_02_104800194 chr16:88616370-88658330 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 194 25 1895 124 6 153 4769 ZC3H18,MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
SE_02_001700339 chr16:88616678-88640923 Sample_02_0017 Embryo H9_ESC 339 6 1009 55 4 94 1821 ZC3H18,IL17C,CYBA,SNAI3,MVD,MGC23284
SE_02_002400169 chr16:88618707-88655394 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 169 10 1660 101 5 125 4088 ZC3H18,CYBA,IL17C,MVD,SNAI3,MGC23284,RNF166
SE_02_102900475 chr16:88628518-88659524 Sample_02_1029 Colon HCT116 475 15 1460 103 4 118 4032 ZC3H18,MVD,IL17C,CYBA,RNF166,CTU2,SNAI3-AS1,SNAI3
Genomic distribution of SEs associated with ZC3H18
Genome Browser

The strength of the tissue affected by the gene

Expression of ZC3H18

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)