SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000165238
Gene: WNK2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr9:93184916-93320572 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_036800095 chr9:93116073-93235328 Sample_02_0368 Skeletal muscle NS134 95 16 3587 382 10 344 1345 WNK2,NINJ1,C9ORF89
SE_02_003200238 chr9:93173036-93245649 Sample_02_0032 Pancreas pancreatic-islets-M 238 14 2094 213 4 248 869 WNK2,NINJ1
SE_01_010100122 chr9:93173187-93269406 Sample_01_0101 Pancreas pancreas_54y 122 31 2870 264 5 352 2407 WNK2,NINJ1
SE_02_108200030 chr9:93176841-93261193 Sample_02_1082 Retina retina 30 33 2475 227 5 309 1658 WNK2,NINJ1
SE_02_108300022 chr9:93176992-93265391 Sample_02_1083 Macula macula 22 26 2633 237 5 335 2118 WNK2,NINJ1
SE_02_039602019 chr9:93177719-93269122 Sample_02_0396 Skin NHEK-D 2019 29 2749 247 5 349 2396 WNK2,NINJ1
SE_02_115100266 chr9:93178890-93264686 Sample_02_1151 Mammary gland MCF-7_UNTR 266 40 2580 232 5 335 2118 WNK2,NINJ1
SE_02_036700181 chr9:93181148-93263242 Sample_02_0367 Skeletal muscle NS129 181 13 2457 224 5 315 1909 WNK2,NINJ1
SE_00_003400111 chr9:93181717-93225349 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 111 8 1239 132 2 174 303 WNK2,NINJ1
SE_02_088900432 chr9:93181771-93231675 Sample_02_0889 Heart left ventricle_LV1183 432 22 1448 158 3 205 530 WNK2,NINJ1
SE_02_092500115 chr9:93181883-93231723 Sample_02_0925 Heart fetal heart_PCW17_12570 115 18 1447 157 3 205 530 WNK2,NINJ1
SE_02_092100142 chr9:93181925-93231892 Sample_02_0921 Heart embryonic heart_CS22 142 23 1455 158 3 205 530 WNK2,NINJ1
SE_02_092400177 chr9:93181957-93231546 Sample_02_0924 Heart fetal heart_PCW10_12569 177 24 1437 157 3 205 530 WNK2,NINJ1
SE_01_008100498 chr9:93181973-93225090 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 498 6 1223 129 2 174 303 WNK2,NINJ1
SE_02_092200187 chr9:93182170-93226744 Sample_02_0922 Heart fetal heart_PCW10_12434 187 16 1268 132 2 179 303 WNK2,NINJ1
SE_02_092300173 chr9:93182174-93231630 Sample_02_0923 Heart fetal heart_PCW10_12522 173 20 1438 156 3 205 530 WNK2,NINJ1
SE_01_007700478 chr9:93182199-93224349 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 478 8 1204 127 2 174 303 WNK2,NINJ1
SE_02_089200279 chr9:93182294-93229121 Sample_02_0892 Heart left ventricle_LV1215 279 16 1339 140 2 184 303 WNK2,NINJ1
SE_02_090400450 chr9:93182295-93231597 Sample_02_0904 Heart left ventricle_DCM_LV1028 450 17 1437 156 3 205 530 WNK2,NINJ1
SE_02_089800304 chr9:93182466-93263026 Sample_02_0898 Heart left ventricle_LV1356 304 27 2431 219 5 315 1909 WNK2,NINJ1
SE_02_091300600 chr9:93182491-93231775 Sample_02_0913 Heart left ventricle_DCM_LV1304 600 26 1440 156 3 205 530 WNK2,NINJ1
SE_02_090600693 chr9:93182492-93225504 Sample_02_0906 Heart left ventricle_DCM_LV1072 693 16 1235 130 2 174 303 WNK2,NINJ1
SE_02_089000310 chr9:93182551-93226186 Sample_02_0890 Heart left ventricle_LV1200 310 20 1246 129 2 176 303 WNK2,NINJ1
SE_02_091100644 chr9:93182702-93226020 Sample_02_0911 Heart left ventricle_DCM_LV1290 644 19 1240 129 2 174 303 WNK2,NINJ1
SE_01_007400620 chr9:93182704-93224419 Sample_01_0074 Esophagus muscularis mucosa esophagus-muscularis-mucosa 620 6 1199 126 2 174 303 WNK2,NINJ1
SE_00_004600127 chr9:93182725-93231577 Sample_00_0046 Heart right ventricle_34y 127 28 1430 154 3 205 530 WNK2,NINJ1
SE_02_089100365 chr9:93182817-93224769 Sample_02_0891 Heart left ventricle_LV1202 365 22 1204 126 2 173 303 WNK2,NINJ1
SE_02_090700949 chr9:93182822-93231346 Sample_02_0907 Heart left ventricle_DCM_LV1223 949 12 1415 153 3 202 530 WNK2,NINJ1
SE_02_088700357 chr9:93182856-93226062 Sample_02_0887 Heart left ventricle_LV1121 357 19 1237 128 2 173 303 WNK2,NINJ1
SE_02_074700297 chr9:93182897-93228795 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 297 18 1316 138 2 181 303 WNK2,NINJ1
SE_02_090801482 chr9:93182904-93223459 Sample_02_0908 Heart left ventricle_DCM_LV1262 1482 18 1172 125 2 170 303 WNK2,NINJ1
SE_01_009800176 chr9:93182909-93248519 Sample_01_0098 Heart left ventricle_51y 176 18 1952 186 4 248 1015 WNK2,NINJ1
SE_02_090300297 chr9:93182918-93246787 Sample_02_0903 Heart left ventricle_DCM_LV1009 297 27 1887 185 4 240 869 WNK2,NINJ1
SE_02_027700326 chr9:93183149-93208549 Sample_02_0277 Retina FW18 326 2 731 88 2 150 303 WNK2,NINJ1
SE_02_027500352 chr9:93183223-93208572 Sample_02_0275 Retina FW14 352 2 731 88 2 149 303 WNK2,NINJ1
SE_02_027800358 chr9:93183280-93208632 Sample_02_0278 Retina FW24 358 2 731 88 2 149 303 WNK2,NINJ1
SE_01_008300701 chr9:93183296-93223735 Sample_01_0083 Sigmoid colon sigmoid-colon 701 6 1169 125 2 169 303 WNK2,NINJ1
SE_02_042400506 chr9:93183359-93211394 Sample_02_0424 Colon SW620 506 2 796 89 2 149 303 WNK2,NINJ1
SE_01_007800697 chr9:93183417-93224233 Sample_01_0078 Heart left ventricle heart-left-ventricle 697 6 1176 125 2 170 303 WNK2,NINJ1
SE_02_097100601 chr9:93183461-93208247 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 601 10 719 88 2 148 303 WNK2,NINJ1
SE_01_007900352 chr9:93183525-93232606 Sample_01_0079 Peyers patch Peyers-patch 352 6 1454 162 3 202 530 WNK2,NINJ1
SE_02_096200523 chr9:93183585-93208373 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 523 10 718 88 2 147 303 WNK2,NINJ1
SE_01_010300086 chr9:93183648-93245855 Sample_01_0103 Pancreas pancreas_37y 86 25 1835 185 4 237 869 WNK2,NINJ1
SE_02_047700170 chr9:93183660-93244912 Sample_02_0477 Colon intestinal epithelial organoids_139a 170 31 1812 184 4 237 869 WNK2,NINJ1
SE_01_008900603 chr9:93183714-93232005 Sample_01_0089 Transverse colon transverse-colon 603 8 1428 155 3 200 530 WNK2,NINJ1
SE_01_010900231 chr9:93183717-93234947 Sample_01_0109 Colon transverse colon_54y 231 23 1513 167 4 208 606 WNK2,NINJ1
SE_00_002100346 chr9:93183757-93225443 Sample_00_0021 Lung lung_3y 346 8 1207 128 2 169 303 WNK2,NINJ1
SE_02_038200663 chr9:93183818-93225938 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 663 4 1215 128 2 169 303 WNK2,NINJ1
SE_02_038100302 chr9:93184110-93226570 Sample_02_0381 Heart purified cardiomyocyte WT 302 4 1229 127 2 162 303 WNK2,NINJ1
SE_02_088800614 chr9:93184111-93228335 Sample_02_0888 Heart left ventricle_LV1160 614 23 1281 136 2 164 303 WNK2,NINJ1
SE_00_005200378 chr9:93184159-93231562 Sample_00_0052 Heart left ventricle 3y 378 25 1400 153 3 187 530 WNK2,NINJ1
SE_02_155900675 chr9:93184168-93208519 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 675 5 714 87 2 130 303 WNK2,NINJ1
SE_02_091900710 chr9:93185245-93226298 Sample_02_0919 Heart left ventricle_DCM_LV1532 710 21 1203 127 2 109 149 WNK2
SE_02_090000746 chr9:93185274-93225199 Sample_02_0900 Heart left ventricle_LV1452 746 13 1173 125 2 106 135 WNK2
SE_02_110600319 chr9:93185286-93267695 Sample_02_1106 Brain NGP 319 51 2517 231 5 267 1974 WNK2
SE_02_090200433 chr9:93185289-93231707 Sample_02_0902 Heart left ventricle_LV1558 433 16 1391 153 3 137 356 WNK2
SE_02_089600951 chr9:93185307-93226169 Sample_02_0896 Heart left ventricle_LV1294 951 20 1197 127 2 105 125 WNK2
SE_02_089400366 chr9:93185309-93224027 Sample_02_0894 Heart left ventricle_LV1248 366 14 1143 124 2 104 125 WNK2
SE_02_092000570 chr9:93185313-93223660 Sample_02_0920 Heart left ventricle_DCM_LV1535 570 14 1136 124 2 103 122 WNK2
SE_02_089300338 chr9:93185333-93225977 Sample_02_0893 Heart left ventricle_LV1226 338 14 1194 127 2 105 118 WNK2
SE_02_090500814 chr9:93185337-93226331 Sample_02_0905 Heart left ventricle_DCM_LV1033 814 13 1201 127 2 110 118 WNK2
SE_02_090100396 chr9:93185354-93262620 Sample_02_0901 Heart left ventricle_LV1471 396 36 2361 215 5 241 1647 WNK2
SE_02_128300334 chr9:93185356-93242530 Sample_02_1283 Lung NCI-H2107_p8-15 334 18 1696 180 4 170 671 WNK2
SE_02_110500541 chr9:93185390-93263355 Sample_02_1105 Brain NBL-S 541 40 2388 217 5 243 1700 WNK2
SE_02_091001151 chr9:93185391-93225993 Sample_02_0910 Heart left ventricle_DCM_LV1275 1151 23 1193 127 2 102 94 WNK2
SE_02_089700664 chr9:93185433-93224622 Sample_02_0897 Heart left ventricle_LV1325 664 21 1158 124 2 101 85 WNK2
SE_02_090900824 chr9:93185449-93223481 Sample_02_0909 Heart left ventricle_DCM_LV1264 824 17 1131 124 2 99 79 WNK2
SE_00_003500167 chr9:93186144-93235562 Sample_00_0035 Sigmoid colon sigmoid-colon 167 15 1482 166 4 137 352 WNK2
SE_02_049400235 chr9:93186323-93208353 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 235 11 665 85 2 70 0 WNK2
SE_01_007100162 chr9:93186383-93245487 Sample_01_0071 Pancreas body-of-pancreas 162 12 1772 182 4 158 566 WNK2
SE_00_005700157 chr9:93186389-93231538 Sample_00_0057 Heart right ventricle 3y 157 42 1355 151 3 120 227 WNK2
SE_02_047800242 chr9:93186821-93245986 Sample_02_0478 Colon normal colon mucosa 242 29 1772 182 4 148 566 WNK2
SE_00_005400049 chr9:93187000-93240724 Sample_00_0054 Pancreas pancreas 30y 49 38 1622 172 4 148 566 WNK2
SE_02_118100731 chr9:93187053-93210306 Sample_02_1181 Brain GBM10 731 10 702 85 2 58 0 WNK2
SE_00_005600427 chr9:93187099-93234624 Sample_00_0056 Sigmoid colon sigmoid colon 3y 427 30 1430 162 4 115 234 WNK2
SE_01_009900320 chr9:93188044-93231641 Sample_01_0099 Colon transverse colon 320 20 1313 146 3 107 227 WNK2
SE_02_052400443 chr9:93188079-93225398 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 443 16 1108 120 2 76 0 WNK2
SE_02_052500761 chr9:93188138-93207960 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 761 10 606 80 2 52 0 WNK2
SE_00_003000333 chr9:93188738-93203027 Sample_00_0030 Pancreas pancreas 333 7 448 71 1 35 0 WNK2
SE_02_023700781 chr9:93192209-93245118 Sample_02_0237 Colon V389 781 13 1549 145 3 143 566 WNK2
SE_02_004600168 chr9:93192371-93211070 Sample_02_0046 Embryo endodermal CyT49_ES_D10 168 5 515 50 1 53 0 WNK2
SE_02_049500179 chr9:93192603-93207997 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 179 9 431 49 1 51 0 WNK2
SE_02_024200465 chr9:93192609-93229741 Sample_02_0242 Colon V481 465 4 1057 101 2 90 40 WNK2
SE_02_024100205 chr9:93192846-93233039 Sample_02_0241 Colon V456 205 9 1185 124 2 110 227 WNK2
SE_00_002001580 chr9:93192965-93213185 Sample_00_0020 Large intestine large-intestine_108d 1580 4 561 50 1 54 0 WNK2
SE_02_030600506 chr9:93193113-93231932 Sample_02_0306 Autonomic ganglia SH-SY5Y 506 5 1135 114 2 102 227 WNK2
SE_02_035300501 chr9:93195788-93245573 Sample_02_0353 Colon HT29 501 6 1468 135 3 133 566 WNK2
SE_02_121800015 chr9:93196879-93304584 Sample_02_1218 Bone marrow Daudi 15 35 3234 269 7 353 3075 WNK2,C9ORF129,FAM120A
SE_02_138400270 chr9:93197680-93269031 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 270 19 2192 182 4 232 2080 WNK2
SE_02_105100377 chr9:93198059-93232818 Sample_02_1051 Esophagus Eso26 377 17 1039 107 2 93 227 WNK2
SE_02_104700996 chr9:93198168-93274503 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 996 24 2349 194 4 234 2104 WNK2
SE_02_001500641 chr9:93199915-93210277 Sample_02_0015 Liver HepG2_shNS 641 2 297 22 1 36 0 WNK2
SE_02_096100448 chr9:93200902-93218738 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 448 6 509 30 1 45 0 WNK2
SE_02_074600208 chr9:93200985-93223920 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 208 6 664 51 1 57 0 WNK2
SE_00_004900551 chr9:93201972-93232007 Sample_00_0049 Small intestine small intestine 30y 551 10 887 75 1 85 227 WNK2
SE_02_074501045 chr9:93203163-93208678 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1045 3 152 6 0 18 0 WNK2
SE_00_003000491 chr9:93217978-93231658 Sample_00_0030 Pancreas pancreas 491 4 430 52 1 49 227 WNK2
SE_02_077900057 chr9:93229462-93309059 Sample_02_0779 Lymphoma U2932 57 23 2429 186 6 319 3301 WNK2,C9ORF129
SE_02_003500032 chr9:93229687-93325838 Sample_02_0035 Peripheral blood CUTLL1_GSI_wash 32 24 2944 222 6 332 3795 C9ORF129,WNK2
SE_02_012200251 chr9:93248743-93303276 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 251 7 1626 133 4 216 2363 WNK2,C9ORF129,NINJ1
SE_02_129200410 chr9:93249283-93270304 Sample_02_1292 Lung JHU-LX110-SCLC PDX 410 5 694 55 1 95 1392 WNK2
SE_02_099800076 chr9:93258147-93305384 Sample_02_0998 Lymphoma OCI-LY1_DMSO 76 27 1428 113 4 186 1997 WNK2,C9ORF129,NINJ1
SE_02_034800530 chr9:93259330-93272815 Sample_02_0348 Peripheral blood CUTLL1_wild-type 530 1 482 33 0 49 874 WNK2,C9ORF129
SE_02_022600216 chr9:93259978-93305831 Sample_02_0226 Blood KOPTK1 216 3 1376 110 3 160 1720 WNK2,C9ORF129,NINJ1
SE_02_075100078 chr9:93260132-93305186 Sample_02_0751 Lymphoma Rec-1_WO 78 21 1358 110 3 160 1720 WNK2,C9ORF129
SE_02_022500119 chr9:93260421-93303064 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 119 7 1275 107 3 160 1720 WNK2,C9ORF129
SE_02_021300091 chr9:93260570-93303424 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 91 5 1287 108 3 159 1720 WNK2,C9ORF129,NINJ1
SE_01_005500038 chr9:93260650-93303205 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 38 5 1269 105 3 159 1720 WNK2,C9ORF129,NINJ1
SE_02_115300100 chr9:93260666-93303154 Sample_02_1153 Lymphoma RL_R1446C_gRNA1 100 5 1268 105 3 159 1720 WNK2,C9ORF129
SE_02_099900129 chr9:93260790-93303256 Sample_02_0999 Lymphoma OCI-LY1_966 129 16 1266 105 3 159 1720 WNK2,C9ORF129,NINJ1
SE_02_012000162 chr9:93260814-93296126 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 162 4 1048 91 2 90 1392 WNK2,C9ORF129
SE_01_005300052 chr9:93260846-93305192 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 52 6 1329 107 3 159 1720 WNK2,C9ORF129,NINJ1
SE_02_130400771 chr9:93260978-93302682 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 771 15 1241 103 3 159 1720 WNK2,C9ORF129,NINJ1
SE_02_115400179 chr9:93260988-93302740 Sample_02_1154 Lymphoma RL_R1446C_gRNA1_KDAC001 179 10 1243 103 3 159 1720 WNK2,C9ORF129,NINJ1
SE_01_009600022 chr9:93261526-93302871 Sample_01_0096 B-cell lymphoma DOHH2 22 8 1225 103 3 159 1720 WNK2,C9ORF129,NINJ1
SE_02_012100147 chr9:93264808-93303134 Sample_02_0121 Haematopoietic and lymphoid tissue SUDHL-4 147 5 1100 96 3 133 1260 WNK2,C9ORF129,NINJ1
SE_02_122100142 chr9:93265127-93288309 Sample_02_1221 Bone marrow KMS11 142 7 641 57 1 20 289 WNK2,C9ORF129
SE_02_028800627 chr9:93265601-93296159 Sample_02_0288 Tonsil CB5_H3K27Ac 627 6 866 79 2 64 932 WNK2,C9ORF129,NINJ1
SE_02_049500525 chr9:93266439-93271110 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 525 3 168 13 0 16 289 WNK2,C9ORF129
SE_02_049400756 chr9:93266615-93272052 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 756 3 194 14 0 16 289 WNK2,C9ORF129
SE_02_049300692 chr9:93267561-93271002 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 692 2 131 10 0 15 286 WNK2,C9ORF129
SE_02_034800426 chr9:93283347-93296216 Sample_02_0348 Peripheral blood CUTLL1_wild-type 426 1 377 39 2 48 643 WNK2,C9ORF129
SE_02_107000084 chr9:93287506-93304761 Sample_02_1070 Blood SupT1_WT 84 9 540 44 3 113 971 WNK2,C9ORF129
SE_02_104600829 chr9:93288416-93350143 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 829 26 1938 184 5 197 2047 C9ORF129,WNK2
SE_02_001500606 chr9:93288607-93313316 Sample_02_0015 Liver HepG2_shNS 606 4 748 52 2 151 1194 WNK2,C9ORF129
Genomic distribution of SEs associated with WNK2
Genome Browser

The strength of the tissue affected by the gene

Expression of WNK2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)