Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000234076
Gene: TPRG1-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr3:188941715-188947639 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_009300733 chr3:188877421-188963191 Sample_01_0093 Aorta ascending aorta 733 17 2303 29 7 322 1312 TPRG1-AS1,LPP,TPRG1
SE_02_061100320 chr3:188881240-188980195 Sample_02_0611 Liposarcoma DDLPS_T1 320 29 2684 36 8 381 962 TPRG1-AS1,LPP
SE_02_119700499 chr3:188888289-188954666 Sample_02_1197 Brain GBM33 499 23 1829 18 6 229 308 TPRG1-AS1,LPP
SE_02_061300427 chr3:188888305-188952148 Sample_02_0613 Liposarcoma MLPS_T1 427 21 1756 18 6 225 307 TPRG1-AS1,LPP
SE_02_119200225 chr3:188888347-188953780 Sample_02_1192 Brain GBM26 225 15 1800 18 6 229 302 TPRG1-AS1,LPP
SE_02_119500648 chr3:188889249-188954700 Sample_02_1195 Brain GBM29 648 23 1798 18 6 215 227 TPRG1-AS1,LPP
SE_02_119100229 chr3:188898975-188954710 Sample_02_1191 Brain GBM25 229 27 1553 17 5 197 92 TPRG1-AS1
SE_02_133000341 chr3:188899139-188952371 Sample_02_1330 Blood AMU-AML1 341 22 1486 17 5 193 92 TPRG1-AS1
SE_02_131100417 chr3:188899478-188956600 Sample_02_1311 Bone marrow HDMSCs 417 8 1587 18 5 209 92 TPRG1-AS1
SE_02_061200520 chr3:188899938-188952360 Sample_02_0612 Liposarcoma DDLPS_T2 520 12 1462 17 5 193 92 TPRG1-AS1
SE_02_058600464 chr3:188900273-188956465 Sample_02_0586 Chordal patient-derived chordoma MGH_4 464 16 1559 18 5 205 92 TPRG1-AS1
SE_02_118700274 chr3:188900487-188954718 Sample_02_1187 Brain GBM16 274 19 1504 17 5 197 92 TPRG1-AS1
SE_02_149600123 chr3:188905829-188954704 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 123 22 1357 17 5 184 92 TPRG1-AS1
SE_02_084100623 chr3:188906132-188974788 Sample_02_0841 Blood THP-1_untr 623 11 1888 23 5 246 92 TPRG1-AS1
SE_02_046500246 chr3:188913877-188958349 Sample_02_0465 Adipose subcutaneous adipocytes 246 16 1228 15 5 166 92 TPRG1-AS1
SE_02_057400366 chr3:188914020-188953508 Sample_02_0574 Blood MOLM-13_sgNeg2 366 12 1094 14 5 148 92 TPRG1-AS1
SE_02_058200421 chr3:188914094-188952132 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 421 6 1053 14 5 145 92 TPRG1-AS1
SE_02_057700402 chr3:188914234-188952397 Sample_02_0577 Blood MOLM13_empty 402 9 1062 14 5 145 92 TPRG1-AS1
SE_02_058100588 chr3:188914303-188954578 Sample_02_0581 Blood MOLM13_empty_HG 588 10 1122 14 5 149 92 TPRG1-AS1
SE_02_099500295 chr3:188914330-188954584 Sample_02_0995 Blood MOLM-13_empty vector 295 15 1122 14 5 149 92 TPRG1-AS1
SE_02_099400293 chr3:188914439-188952178 Sample_02_0994 Blood MOLM13_SIK3TQ 293 14 1048 14 5 145 92 TPRG1-AS1
SE_02_117700572 chr3:188925315-188956686 Sample_02_1177 Brain GBM05 572 12 873 15 2 142 92 TPRG1-AS1
SE_02_119900206 chr3:188925337-188980194 Sample_02_1199 Brain GBM35 206 19 1504 25 3 261 92 TPRG1-AS1
SE_02_119400493 chr3:188925347-188956464 Sample_02_1194 Brain GBM28 493 8 866 15 2 136 92 TPRG1-AS1
SE_02_118300341 chr3:188926519-188956414 Sample_02_1183 Brain GBM12 341 11 839 15 2 125 92 TPRG1-AS1
SE_02_053301233 chr3:188926691-188952507 Sample_02_0533 Blood vessel Circle of Willis_54y 1233 7 728 14 2 113 92 TPRG1-AS1
SE_02_061400349 chr3:188927238-188987509 Sample_02_0614 Liposarcoma MLPS_T2 349 26 1646 25 4 249 92 TPRG1-AS1
SE_02_133100694 chr3:188927875-188952148 Sample_02_1331 Blood Molm13_CTRL 694 7 684 13 2 99 92 TPRG1-AS1
SE_02_133200406 chr3:188928086-188952429 Sample_02_1332 Blood Monomac6_CTRL 406 6 690 13 2 99 92 TPRG1-AS1
SE_02_086800645 chr3:188928180-188956877 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 645 12 805 14 2 117 92 TPRG1-AS1
SE_02_077100867 chr3:188928388-188952273 Sample_02_0771 Ovary OVCA429_shGRHL2 867 11 661 13 2 97 92 TPRG1-AS1
SE_02_127801142 chr3:188928900-188955258 Sample_02_1278 Chordoma UCH1_DMSO_48h 1142 5 716 13 2 102 92 TPRG1-AS1
SE_02_077000823 chr3:188928941-188954667 Sample_02_0770 Ovary OVCA429_shLuc 823 8 704 13 2 101 92 TPRG1-AS1
SE_02_099300353 chr3:188929450-188952355 Sample_02_0993 Blood MOLM-13_empty 353 9 621 13 2 96 92 TPRG1-AS1
SE_02_109800496 chr3:188929466-188952195 Sample_02_1098 Blood THP1_DMSO_noPMA 496 6 613 13 2 96 92 TPRG1-AS1
SE_02_057800512 chr3:188929546-188952028 Sample_02_0578 Blood MOLM-13_sgSIK3e4 512 9 608 13 2 94 92 TPRG1-AS1
SE_02_046600694 chr3:188929600-188979950 Sample_02_0466 Adipose visceral adipocytes 694 15 1368 24 3 233 92 TPRG1-AS1
SE_02_157301319 chr3:188930620-188954677 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 1319 9 653 13 2 100 92 TPRG1-AS1
SE_02_134500590 chr3:188938626-188954424 Sample_02_1345 Leukophereses leukophereses_p358 590 13 425 4 1 83 92 TPRG1-AS1
SE_02_054800362 chr3:188938774-188952063 Sample_02_0548 Blood THP-1_24h with EtOH 362 6 349 4 1 79 92 TPRG1-AS1
SE_02_057500573 chr3:188938928-188951714 Sample_02_0575 Blood MOLM13_sgLKB1e2 573 6 332 4 1 75 92 TPRG1-AS1
SE_02_093001096 chr3:188939530-188965045 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1096 17 665 7 1 136 92 TPRG1-AS1
SE_02_088901005 chr3:188939930-188958433 Sample_02_0889 Heart left ventricle_LV1183 1005 5 481 5 1 100 92 TPRG1-AS1
SE_02_117500603 chr3:188939985-188953997 Sample_02_1175 Brain GBM03 603 8 362 4 1 81 92 TPRG1-AS1
SE_02_131000442 chr3:188940028-188980485 Sample_02_1310 Bone marrow ASMSCs 442 8 1069 15 2 217 92 TPRG1-AS1
SE_02_091201123 chr3:188940031-188980462 Sample_02_0912 Heart left ventricle_DCM_LV1300 1123 11 1068 15 2 217 92 TPRG1-AS1
SE_02_090401465 chr3:188940076-188956848 Sample_02_0904 Heart left ventricle_DCM_LV1028 1465 6 435 5 1 95 92 TPRG1-AS1
SE_02_117400248 chr3:188940093-188956410 Sample_02_1174 Brain GBM02 248 8 425 5 1 89 92 TPRG1-AS1
SE_02_090001190 chr3:188940142-188956884 Sample_02_0900 Heart left ventricle_LV1452 1190 7 432 5 1 95 92 TPRG1-AS1
SE_02_118500664 chr3:188940144-188954837 Sample_02_1185 Brain GBM14 664 6 381 4 1 81 92 TPRG1-AS1
SE_02_118600373 chr3:188940150-188956669 Sample_02_1186 Brain GBM15 373 9 429 5 1 95 92 TPRG1-AS1
SE_02_134700277 chr3:188940169-188952174 Sample_02_1347 Leukophereses leukophereses_p401 277 5 304 4 1 77 92 TPRG1-AS1
SE_02_089801137 chr3:188940182-188956955 Sample_02_0898 Heart left ventricle_LV1356 1137 7 434 5 1 95 92 TPRG1-AS1
SE_02_091001088 chr3:188940198-188957401 Sample_02_0910 Heart left ventricle_DCM_LV1275 1088 6 451 5 1 98 92 TPRG1-AS1
SE_01_010701409 chr3:188940284-188956919 Sample_01_0107 Esophagus esophagus squamous epithelium 1409 9 428 5 1 95 92 TPRG1-AS1
SE_02_149400172 chr3:188940310-188954676 Sample_02_1494 Other monocyte-derived dendritic cells_0h 172 9 371 4 1 81 92 TPRG1-AS1
SE_02_081601226 chr3:188940321-188954085 Sample_02_0816 Ovary Clear cell ovarian cancer 1226 9 352 4 1 81 92 TPRG1-AS1
SE_00_005200848 chr3:188940349-188954725 Sample_00_0052 Heart left ventricle 3y 848 4 369 4 1 81 92 TPRG1-AS1
SE_01_010600219 chr3:188940361-188951326 Sample_01_0106 Adrenal gland adrenal gland 54y 219 5 262 4 1 73 92 TPRG1-AS1
SE_02_090101026 chr3:188940426-188956522 Sample_02_0901 Heart left ventricle_LV1471 1026 6 416 5 1 89 92 TPRG1-AS1
SE_02_090701425 chr3:188940452-188957525 Sample_02_0907 Heart left ventricle_DCM_LV1223 1425 5 444 5 1 98 92 TPRG1-AS1
SE_02_091501097 chr3:188940470-188957430 Sample_02_0915 Heart left ventricle_DCM_LV1371 1097 7 443 5 1 98 92 TPRG1-AS1
SE_02_088801199 chr3:188940772-188956872 Sample_02_0888 Heart left ventricle_LV1160 1199 3 417 5 1 89 92 TPRG1-AS1
SE_02_089001063 chr3:188940783-188956999 Sample_02_0890 Heart left ventricle_LV1200 1063 6 419 5 1 89 92 TPRG1-AS1
SE_02_089301066 chr3:188940854-188957591 Sample_02_0893 Heart left ventricle_LV1226 1066 8 441 5 1 90 92 TPRG1-AS1
SE_02_089201385 chr3:188940871-188957056 Sample_02_0892 Heart left ventricle_LV1215 1385 6 418 5 1 87 92 TPRG1-AS1
SE_02_090601260 chr3:188940928-188956767 Sample_02_0906 Heart left ventricle_DCM_LV1072 1260 3 412 5 1 78 92 TPRG1-AS1
SE_02_121100870 chr3:188941025-188952292 Sample_02_1211 Brain GBM21 870 7 288 4 1 57 92 TPRG1-AS1
SE_02_120000699 chr3:188941538-188954742 Sample_02_1200 Brain GBM36 699 6 347 4 1 56 92 TPRG1-AS1
SE_02_123400442 chr3:188943124-188979563 Sample_02_1234 Mammary gland T47D_Full 442 7 993 14 2 177 92 TPRG1-AS1
SE_02_081800437 chr3:188944085-188961256 Sample_02_0818 Ovary High-grade serous ovarian cancer 437 8 464 5 1 74 92 TPRG1-AS1
SE_02_119800525 chr3:188944091-188952330 Sample_02_1198 Brain GBM34 525 5 235 4 1 45 92 TPRG1-AS1
SE_02_119301230 chr3:188944169-188954731 Sample_02_1193 Brain GBM27 1230 4 300 4 1 49 92 TPRG1-AS1
SE_02_097901070 chr3:188944535-188955154 Sample_02_0979 Brain JN14-BS1_H3.3K27M 1070 6 298 4 1 50 92 TPRG1-AS1
SE_02_119601090 chr3:188944605-188954716 Sample_02_1196 Brain GBM32 1090 4 285 4 1 49 92 TPRG1-AS1
SE_02_121000390 chr3:188944719-188952197 Sample_02_1210 Brain GBM17 390 6 212 4 1 45 92 TPRG1-AS1
SE_02_120200615 chr3:188944733-188956199 Sample_02_1202 Brain GBM38 615 6 328 5 1 57 92 TPRG1-AS1
SE_02_066100889 chr3:188945193-188951622 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 889 3 184 3 0 41 92 TPRG1-AS1
SE_02_093700702 chr3:188946026-188950277 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 702 1 113 2 0 36 92 TPRG1-AS1
SE_01_010100964 chr3:188946461-188956472 Sample_01_0101 Pancreas pancreas_54y 964 2 287 4 0 56 92 TPRG1-AS1
SE_02_116700945 chr3:188946467-188952573 Sample_02_1167 Biliary H69_TGF Vehicle_1 945 1 178 3 0 45 92 TPRG1-AS1
SE_02_139000599 chr3:188946471-188952340 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 599 1 174 3 0 44 92 TPRG1-AS1
SE_02_047900965 chr3:188946497-188952283 Sample_02_0479 Head and neck SCC25 965 2 167 3 0 44 92 TPRG1-AS1
SE_02_060200611 chr3:188946511-188951638 Sample_02_0602 Mammary gland MCF10A_p63shRNA_DMSO 611 1 146 3 0 40 92 TPRG1-AS1
SE_02_060000629 chr3:188946610-188954634 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 629 3 233 3 0 48 92 TPRG1-AS1
SE_02_089900914 chr3:188946633-188956775 Sample_02_0899 Heart left ventricle_LV1400 914 4 287 4 0 62 92 TPRG1-AS1
SE_02_105400580 chr3:188946803-188952312 Sample_02_1054 Esophagus SKGT4 580 2 161 2 0 44 92 TPRG1-AS1
SE_02_155600464 chr3:188946874-188956576 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 464 2 277 3 0 60 92 TPRG1-AS1
SE_02_094801065 chr3:188946950-188952228 Sample_02_0948 Pharyng Detroit562 1065 1 154 2 0 44 92 TPRG1-AS1
SE_02_156801014 chr3:188947225-188954758 Sample_02_1568 Heart Cardiac progenitor cells 1014 3 224 2 0 46 54 TPRG1-AS1

Genomic distribution of SEs associated with TPRG1-AS1

The strength of the tissue affected by the gene


Expression of TPRG1-AS1