Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | ENSG00000116147 |
| Gene: | TNR | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr1:175315194-175743616 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_143400958 | chr1:175359362-175373034 |
Sample_02_1434 | Trophoblast | trophoblast stem cells | 958 | 3 | 379 | 17 | 3 | 97 | 445 | TNR,KIAA0040 |
| SE_02_097900526 | chr1:175447357-175501206 |
Sample_02_0979 | Brain | JN14-BS1_H3.3K27M | 526 | 16 | 1613 | 22 | 2 | 309 | 0 | TNR |
| SE_02_124200152 | chr1:175469810-175564016 |
Sample_02_1242 | Skin | UISO_virus_negative | 152 | 42 | 2734 | 61 | 6 | 550 | 332 | TNR |
| SE_02_123701021 | chr1:175492511-175497617 |
Sample_02_1237 | Skin | MKL2_virus_positive | 1021 | 3 | 132 | 0 | 0 | 67 | 0 | TNR |
| SE_02_156800233 | chr1:175495575-175522709 |
Sample_02_1568 | Heart | Cardiac progenitor cells | 233 | 7 | 785 | 4 | 1 | 166 | 0 | TNR |
| SE_02_095000373 | chr1:175500170-175549921 |
Sample_02_0950 | Umbilical vein | HUVEC_WT | 373 | 30 | 1430 | 23 | 3 | 293 | 52 | TNR |
| SE_02_083100229 | chr1:175500307-175549935 |
Sample_02_0831 | Umblical vein | HUVECs_TNF0min | 229 | 26 | 1424 | 23 | 3 | 293 | 52 | TNR |
| SE_02_156900323 | chr1:175505284-175549702 |
Sample_02_1569 | Endothelial | Endothelial cells | 323 | 8 | 1242 | 23 | 3 | 261 | 52 | TNR |
| SE_02_002700383 | chr1:175505406-175549862 |
Sample_02_0027 | Umbilical vein | HUVEC_VEGF_4h | 383 | 6 | 1241 | 23 | 3 | 261 | 52 | TNR |
| SE_02_058500233 | chr1:175505535-175549863 |
Sample_02_0585 | Umbilical vein | HUVEC 0hour | 233 | 23 | 1235 | 23 | 3 | 261 | 52 | TNR |
| SE_02_062000590 | chr1:175506086-175522283 |
Sample_02_0620 | Aortic | Aortic Endothelial Cells_DF | 590 | 10 | 427 | 1 | 1 | 90 | 0 | TNR,KIAA0040 |
| SE_01_002600506 | chr1:175508283-175516393 |
Sample_01_0026 | Umbilical vein | endothelial-cell-of-umbilical-vein | 506 | 2 | 204 | 0 | 0 | 54 | 0 | TNR,KIAA0040 |
| SE_02_062100076 | chr1:175508510-175515725 |
Sample_02_0621 | Aortic | Aortic Endothelial Cells_UF | 76 | 4 | 184 | 0 | 0 | 33 | 0 | TNR |
| SE_02_097900409 | chr1:175514007-175574946 |
Sample_02_0979 | Brain | JN14-BS1_H3.3K27M | 409 | 15 | 1762 | 72 | 4 | 365 | 561 | TNR |
| SE_02_096000383 | chr1:175540416-175564188 |
Sample_02_0960 | Brain | H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells | 383 | 5 | 712 | 39 | 3 | 129 | 282 | TNR |
| SE_02_096200538 | chr1:175563604-175615188 |
Sample_02_0962 | Brain | H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells | 538 | 14 | 1551 | 74 | 3 | 278 | 266 | TNR |
| SE_02_096000509 | chr1:175590667-175599937 |
Sample_02_0960 | Brain | H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells | 509 | 4 | 290 | 21 | 0 | 56 | 0 | TNR |
| SE_02_156800801 | chr1:175596656-175603608 |
Sample_02_1568 | Heart | Cardiac progenitor cells | 801 | 2 | 208 | 3 | 1 | 37 | 0 | TNR |
| SE_02_096200021 | chr1:175648382-175755240 |
Sample_02_0962 | Brain | H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells | 21 | 42 | 3246 | 9 | 22 | 509 | 111 | TNR |
| SE_02_096100071 | chr1:175661807-175688939 |
Sample_02_0961 | Brain | H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells | 71 | 18 | 859 | 3 | 3 | 113 | 0 | TNR |
| SE_02_096600560 | chr1:175662998-175688456 |
Sample_02_0966 | Brain | H3.3K27M_JN29-BS3 | 560 | 11 | 817 | 3 | 3 | 110 | 0 | TNR |
| SE_02_097100110 | chr1:175663762-175755382 |
Sample_02_0971 | Brain | H3.3K27M_XPS124018_xenograft | 110 | 33 | 2804 | 6 | 22 | 473 | 111 | TNR |
| SE_02_097900072 | chr1:175666634-175756449 |
Sample_02_0979 | Brain | JN14-BS1_H3.3K27M | 72 | 30 | 2744 | 6 | 22 | 482 | 111 | TNR |
| SE_02_121200766 | chr1:175667468-175684312 |
Sample_02_1212 | Brain | GBM30 | 766 | 7 | 539 | 2 | 3 | 80 | 0 | TNR |
| SE_02_066300401 | chr1:175668861-175684375 |
Sample_02_0663 | Thyroid | TT | 401 | 4 | 478 | 2 | 3 | 79 | 0 | TNR |
| SE_02_096000065 | chr1:175671084-175684528 |
Sample_02_0960 | Brain | H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells | 65 | 12 | 425 | 2 | 3 | 67 | 0 | TNR |
| SE_02_117900527 | chr1:175671898-175689781 |
Sample_02_1179 | Brain | GBM08 | 527 | 8 | 569 | 2 | 4 | 101 | 0 | TNR |
| SE_02_118100758 | chr1:175672760-175687709 |
Sample_02_1181 | Brain | GBM10 | 758 | 6 | 482 | 2 | 3 | 73 | 0 | TNR |
Genomic distribution of SEs associated with TNR