SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000234717
Gene: TMEM212-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr3:171815586-171900749 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_156900005 chr3:171747547-171879043 Sample_02_1569 Endothelial Endothelial cells 5 38 3549 259 14 284 547 TMEM212,TMEM212-AS1,PLD1
SE_02_130800003 chr3:171757053-171877272 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 3 23 3269 239 14 256 547 TMEM212,TMEM212-AS1,PLD1
SE_02_127300034 chr3:171768935-171878876 Sample_02_1273 Cervix HeLa 34 29 3042 223 14 244 547 TMEM212,TMEM212-AS1,PLD1
SE_02_130900001 chr3:171769992-171877319 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 1 20 2962 219 14 227 547 TMEM212,TMEM212-AS1,PLD1
SE_02_081600314 chr3:171771073-171879170 Sample_02_0816 Ovary Clear cell ovarian cancer 314 27 3001 220 14 241 547 TMEM212,TMEM212-AS1,PLD1
SE_02_124100080 chr3:171771132-171879789 Sample_02_1241 Skin MCC26_virus_negative 80 28 3015 220 14 244 547 TMEM212,TMEM212-AS1,PLD1
SE_02_076200208 chr3:171771168-171893592 Sample_02_0762 Podocyte podocyte_CTL 208 33 3427 227 14 266 547 TMEM212,TMEM212-AS1,PLD1
SE_02_137800117 chr3:171772288-171877430 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 117 45 2910 215 14 219 547 TMEM212,TMEM212-AS1,PLD1
SE_02_156800050 chr3:171776700-171879287 Sample_02_1568 Heart Cardiac progenitor cells 50 26 2864 209 14 225 547 TMEM212,TMEM212-AS1,PLD1
SE_02_143700458 chr3:171781033-171879213 Sample_02_1437 Liver LSEC-TNF 458 39 2739 201 14 225 547 TMEM212,TMEM212-AS1,PLD1
SE_02_047400075 chr3:171788081-171879644 Sample_02_0474 Fibroblast umbilical cord Fibroblast 75 29 2571 176 13 226 547 TMEM212,TMEM212-AS1,PLD1
SE_02_143801061 chr3:171788933-171879738 Sample_02_1438 Liver LSEC 1061 22 2547 170 12 225 547 TMEM212,TMEM212-AS1,PLD1
SE_02_060900302 chr3:171788941-171892161 Sample_02_0609 Liposarcoma LPS141 302 21 2925 175 12 246 547 TMEM212,TMEM212-AS1,PLD1
SE_02_102700051 chr3:171789067-171890369 Sample_02_1027 Esophagus KYSE180_1 51 35 2866 175 12 243 547 TMEM212,TMEM212-AS1,PLD1
SE_02_094800019 chr3:171789598-171879295 Sample_02_0948 Pharyng Detroit562 19 17 2515 165 10 222 547 TMEM212,TMEM212-AS1,PLD1
SE_02_126500091 chr3:171789807-171879721 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 91 16 2524 164 10 225 547 TMEM212,TMEM212-AS1,PLD1
SE_02_049200085 chr3:171789988-171883379 Sample_02_0492 Pharyng Detroit 562_LPS 85 31 2628 164 10 239 547 TMEM212,TMEM212-AS1,PLD1
SE_02_049100126 chr3:171790017-171879657 Sample_02_0491 Pharyng Detroit 562-Control 126 21 2515 162 10 223 547 TMEM212,TMEM212-AS1,PLD1
SE_02_113200118 chr3:171790026-171883172 Sample_02_1132 Pancreas KLM1 wt 118 26 2622 163 10 237 547 TMEM212,TMEM212-AS1,PLD1
SE_02_141500047 chr3:171790704-171878695 Sample_02_1415 Brain DIPGIV 47 22 2466 160 9 216 547 TMEM212,TMEM212-AS1,PLD1
SE_02_135600090 chr3:171806307-171879326 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 90 11 2068 102 5 199 547 TMEM212,TMEM212-AS1,PLD1
SE_02_058500232 chr3:171824431-171876421 Sample_02_0585 Umbilical vein HUVEC 0hour 232 24 1495 65 5 146 383 TMEM212,TMEM212-AS1,PLD1,PP13439
SE_02_147100928 chr3:171824497-171878611 Sample_02_1471 Blood Outgrowth Endothelia BOEC 928 14 1570 68 5 161 383 TMEM212,TMEM212-AS1,PLD1
SE_02_094900117 chr3:171824509-171877414 Sample_02_0949 Umbilical artery HUAEC_WT 117 33 1529 67 5 152 383 TMEM212,TMEM212-AS1,PLD1
SE_02_095000330 chr3:171824513-171878042 Sample_02_0950 Umbilical vein HUVEC_WT 330 37 1552 67 5 154 383 TMEM212,TMEM212-AS1,PLD1,PP13439
SE_02_083100396 chr3:171824517-171876761 Sample_02_0831 Umblical vein HUVECs_TNF0min 396 30 1506 66 5 146 383 TMEM212,TMEM212-AS1,PLD1,PP13439
SE_02_083200472 chr3:171824619-171876814 Sample_02_0832 Umblical vein HUVECs_TNF30min 472 27 1504 66 5 146 383 TMEM212,TMEM212-AS1,PLD1,PP13439
SE_02_141000240 chr3:171825039-171893010 Sample_02_1410 Brain GSC6 240 16 1987 75 5 192 383 TMEM212,TMEM212-AS1,PLD1
SE_02_049900447 chr3:171825819-171879031 Sample_02_0499 Fetal lung IMR90 IR Senescence 447 24 1547 69 5 167 383 TMEM212,TMEM212-AS1,PLD1,PP13439
SE_02_088101167 chr3:171830195-171879291 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 1167 9 1430 61 5 159 383 TMEM212,TMEM212-AS1,PLD1
SE_02_150600584 chr3:171830271-171877508 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 584 11 1370 59 5 144 383 TMEM212,TMEM212-AS1,PLD1
SE_02_059400711 chr3:171833598-171890776 Sample_02_0594 iPSC-derived neural progenitors 711 13 1684 58 4 179 383 TMEM212,TMEM212-AS1,PLD1
SE_02_050001098 chr3:171834508-171879030 Sample_02_0500 Fetal lung IMR90_#2 1098 13 1300 52 4 131 383 TMEM212,TMEM212-AS1,PLD1,PP13439
SE_02_061500582 chr3:171851629-171878787 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 582 5 798 30 0 78 335 TMEM212,TMEM212-AS1,PLD1
SE_02_126600739 chr3:171860493-171879230 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 739 5 553 30 0 61 0 TMEM212-AS1,TMEM212,PLD1
SE_02_055700231 chr3:171860647-171879243 Sample_02_0557 iPSCs WT hiPSC#1 231 5 548 29 0 61 0 TMEM212-AS1,TMEM212
SE_02_105801184 chr3:171860709-171883305 Sample_02_1058 Bone A673_SA2 Rescue 1184 8 667 31 0 79 0 TMEM212-AS1,TMEM212
SE_02_126401056 chr3:171860786-171878985 Sample_02_1264 Bone Im-GCT-4072_G34W KO 1056 4 536 29 0 61 0 TMEM212-AS1,TMEM212
SE_02_083901032 chr3:171862855-171879416 Sample_02_0839 Embryo hNPCs_K755R/+ 1032 5 486 26 0 50 0 TMEM212-AS1,TMEM212
SE_02_076301098 chr3:171866908-171890570 Sample_02_0763 Podocyte podocyte_DEX 1098 4 694 18 0 65 0 TMEM212-AS1,TMEM212
SE_02_086400523 chr3:171870881-171880004 Sample_02_0864 Malignant rhaboid tumor TTC1240_SMARCB1_K364del 523 3 262 11 0 49 0 TMEM212-AS1,TMEM212
SE_02_086600453 chr3:171870934-171880471 Sample_02_0866 Malignant rhaboid tumor TTC1240_SMARCB1_delCC 453 1 273 11 0 52 0 TMEM212-AS1,TMEM212
SE_02_069800381 chr3:171871171-171890672 Sample_02_0698 Lung NCI-H1048-cas9_sgPOU2F3 381 5 580 15 0 65 0 TMEM212-AS1,TMEM212
SE_02_069700594 chr3:171871342-171890400 Sample_02_0697 Lung NCI-H1048-cas9_sgHROSA 594 10 566 15 0 65 0 TMEM212-AS1,TMEM212,PLD1
SE_02_151100504 chr3:171871416-171878389 Sample_02_1511 Lung H3122_untreated 504 3 200 9 0 35 0 TMEM212-AS1,TMEM212
SE_02_135400954 chr3:171871550-171877519 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 954 1 162 7 0 29 0 TMEM212-AS1,TMEM212
SE_02_135300920 chr3:171871765-171877431 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 920 1 152 6 0 29 0 TMEM212-AS1,TMEM212
SE_02_094700431 chr3:171871774-171878642 Sample_02_0947 Tongue Cal27 431 3 192 7 0 40 0 TMEM212-AS1,TMEM212
SE_02_135200911 chr3:171871779-171877613 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 911 1 156 6 0 29 0 TMEM212-AS1,TMEM212
SE_02_135100782 chr3:171871811-171877544 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 782 1 152 6 0 29 0 TMEM212-AS1,TMEM212
SE_02_151400500 chr3:171872579-171879380 Sample_02_1514 Lung Differentiated AT1-like cells 500 3 193 7 0 37 0 TMEM212-AS1,TMEM212
SE_02_061001264 chr3:171872588-171879265 Sample_02_0610 Liposarcoma MLS 1765-92 1264 2 189 7 0 37 0 TMEM212-AS1,TMEM212,PLD1
SE_02_151300323 chr3:171872602-171879466 Sample_02_1513 Lung Transitional AT2->1 cells 323 1 192 7 0 38 0 TMEM212-AS1,TMEM212
SE_02_135501136 chr3:171872609-171879227 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 1136 1 187 7 0 37 0 TMEM212-AS1,TMEM212
SE_02_150900540 chr3:171872664-171877976 Sample_02_1509 Lung H3122_LR 540 3 143 5 0 24 0 TMEM212-AS1,TMEM212
Genomic distribution of SEs associated with TMEM212-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of TMEM212-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)