SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000111843
Gene: TMEM14C Gene type: protein_coding
Strand: + External links:
Genomic region: chr6:10722915-10731129 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_076201126 chr6:10718109-10768991 Sample_02_0762 Podocyte podocyte_CTL 1126 11 1814 107 0 58 1123 TMEM14C,MAK,TMEM14B,PAK1IP1,C6ORF52
SE_02_132201132 chr6:10718325-10736066 Sample_02_1322 Connective Tissue HT1080_WT 1132 7 845 57 0 26 521 TMEM14C,PAK1IP1,C6ORF52,TMEM14B
SE_02_029400513 chr6:10719546-10762097 Sample_02_0294 Pancreatic L3-6_DMSO 513 4 1574 96 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_039500134 chr6:10719591-10761776 Sample_02_0395 Mammary gland BT-549 134 4 1560 95 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_039900367 chr6:10719643-10761034 Sample_02_0399 Mammary gland SUM159PT-BT-474 367 5 1534 93 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_040100380 chr6:10719665-10761525 Sample_02_0401 Mammary gland SUM159PT-T47D 380 5 1550 95 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_042200321 chr6:10719704-10760871 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 321 5 1526 93 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_111100488 chr6:10719819-10763421 Sample_02_1111 Other HGrC1_SMAD2/3KO 488 23 1578 98 0 48 982 TMEM14C,MAK,TMEM14B,PAK1IP1,C6ORF52
SE_02_136300565 chr6:10719824-10731277 Sample_02_1363 Blood Hudep2 565 5 619 46 0 26 519 TMEM14C,PAK1IP1,C6ORF52,TMEM14B
SE_02_083000201 chr6:10719829-10763677 Sample_02_0830 Lung H1703 SMARCA2-infected 201 9 1581 98 0 48 1011 TMEM14C,MAK,TMEM14B,PAK1IP1,C6ORF52
SE_02_043300501 chr6:10719892-10760950 Sample_02_0433 Lung NCI-H1299_EGFP-NEO_reporter_cells_DAC 501 6 1516 88 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_111000832 chr6:10719903-10737292 Sample_02_1110 Other HGrC1 832 5 771 51 0 26 521 TMEM14C,PAK1IP1,C6ORF52,TMEM14B
SE_02_082900164 chr6:10719907-10763618 Sample_02_0829 Lung H1703 SMARCA4-infected 164 10 1570 93 0 48 1003 TMEM14C,MAK,TMEM14B,PAK1IP1,C6ORF52
SE_02_015100436 chr6:10719951-10761685 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 436 4 1530 90 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_061000314 chr6:10719973-10762679 Sample_02_0610 Liposarcoma MLS 1765-92 314 6 1551 91 0 45 938 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_104301873 chr6:10719999-10757901 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1873 5 1409 83 0 45 921 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_061501066 chr6:10720021-10760895 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 1066 7 1504 88 0 45 921 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_099100863 chr6:10720025-10737441 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 863 3 765 51 0 26 521 TMEM14C,PAK1IP1,C6ORF52,TMEM14B
SE_02_081100674 chr6:10720047-10761682 Sample_02_0811 Thyroid BCPAP 674 5 1523 90 0 45 921 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_143701248 chr6:10720091-10762642 Sample_02_1437 Liver LSEC-TNF 1248 13 1540 91 0 45 935 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_015000295 chr6:10720173-10761921 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 295 4 1520 89 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_048100297 chr6:10720182-10764007 Sample_02_0481 Mammary gland MDA-MB231 297 10 1556 92 0 48 1047 TMEM14C,MAK,TMEM14B,PAK1IP1,C6ORF52
SE_02_122900414 chr6:10720381-10780241 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 414 20 1962 111 0 75 1305 TMEM14C,MAK,TMEM14B,PAK1IP1,C6ORF52,SYCP2L
SE_04_000100807 chr6:10720775-10730364 Sample_04_0001 Blood heat shocked K562 807 2 522 36 0 24 453 TMEM14C,PAK1IP1,C6ORF52,TMEM14B
SE_02_017700199 chr6:10721352-10762092 Sample_02_0177 Urinary bladder J82 199 5 1417 80 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_01_005700417 chr6:10721363-10762392 Sample_01_0057 Pancreas duct PANC-1 417 10 1426 80 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_017900275 chr6:10721371-10761418 Sample_02_0179 Urinary bladder T24 275 6 1409 80 0 45 921 TMEM14B,TMEM14C,PAK1IP1,C6ORF52
SE_02_003800978 chr6:10721406-10727515 Sample_02_0038 Embryo DE 978 2 356 21 0 22 318 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_058400258 chr6:10721875-10760607 Sample_02_0584 Lung H1299 WT 258 10 1285 70 0 45 921 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_004000837 chr6:10722302-10772206 Sample_02_0040 Embryo PFG 837 6 1534 80 0 59 1162 TMEM14B,MAK,TMEM14C,PAK1IP1,C6ORF52
SE_02_074600750 chr6:10723084-10757428 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 750 9 1095 58 0 45 836 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_065900537 chr6:10724541-10761653 Sample_02_0659 Lung H23 537 16 1164 60 0 45 762 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_074400523 chr6:10724870-10751415 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 523 7 818 48 0 35 591 TMEM14C,TMEM14B,PAK1IP1,C6ORF52
SE_02_045100823 chr6:10729790-10764012 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 823 9 1014 55 0 24 595 TMEM14C,MAK,TMEM14B,PAK1IP1,C6ORF52
Genomic distribution of SEs associated with TMEM14C
Genome Browser

The strength of the tissue affected by the gene

Expression of TMEM14C

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)