SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000243926
Gene: TIPARP-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr3:156671862-156674446 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_130400505 chr3:156628204-156692527 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 505 28 1494 194 25 292 672 TIPARP,TIPARP-AS1
SE_02_130300576 chr3:156628360-156691410 Sample_02_1303 Lymphoma RL_tazemetostat 576 24 1454 191 25 284 672 TIPARP,TIPARP-AS1
SE_02_138700386 chr3:156634513-156732745 Sample_02_1387 Peripheral blood Mac-1_ALK- 386 44 2144 258 29 426 998 TIPARP,TIPARP-AS1
SE_02_083300889 chr3:156636286-156680931 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 889 10 1038 149 23 183 672 TIPARP,TIPARP-AS1
SE_02_083500796 chr3:156641658-156681753 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 796 8 922 131 22 198 672 TIPARP,TIPARP-AS1
SE_02_106000212 chr3:156642758-156692619 Sample_02_1060 Bone TC71_SA2 KO 212 10 1143 147 22 246 672 TIPARP,TIPARP-AS1
SE_02_106100351 chr3:156642771-156692205 Sample_02_1061 Bone TC71_WT 351 11 1132 145 22 245 672 TIPARP,TIPARP-AS1
SE_02_148800351 chr3:156642771-156692205 Sample_02_1488 Bone TC-71 351 11 1132 145 22 245 672 TIPARP,TIPARP-AS1
SE_02_142900683 chr3:156643460-156712186 Sample_02_1429 Blood GM12878_WT 683 16 1523 174 24 348 998 TIPARP,TIPARP-AS1,SSR3
SE_02_147500818 chr3:156659186-156692674 Sample_02_1475 Bone CHLA-25 818 10 757 77 4 203 672 TIPARP,TIPARP-AS1
SE_02_045600408 chr3:156661169-156723496 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 408 17 1332 131 7 316 998 TIPARP,TIPARP-AS1
SE_02_045400554 chr3:156663085-156705556 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 554 16 947 84 6 285 903 TIPARP,TIPARP-AS1
SE_02_133200544 chr3:156663827-156703225 Sample_02_1332 Blood Monomac6_CTRL 544 8 866 78 6 237 744 TIPARP,TIPARP-AS1
SE_02_142700968 chr3:156663859-156693569 Sample_02_1427 Shoulder fibroblast_343 968 7 668 62 4 204 672 TIPARP,TIPARP-AS1
SE_02_122000605 chr3:156664283-156685538 Sample_02_1220 Bone marrow JJN3 605 6 469 44 3 174 672 TIPARP,TIPARP-AS1
SE_02_122400841 chr3:156664397-156706647 Sample_02_1224 Bone marrow normal plasma cell 841 16 928 84 6 296 982 TIPARP,TIPARP-AS1
SE_02_046600953 chr3:156664421-156730002 Sample_02_0466 Adipose visceral adipocytes 953 32 1374 137 8 352 998 TIPARP,TIPARP-AS1
SE_02_064800495 chr3:156664450-156702795 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 495 15 848 78 6 236 744 TIPARP,TIPARP-AS1
SE_02_143800865 chr3:156664528-156723419 Sample_02_1438 Liver LSEC 865 20 1254 122 7 316 998 TIPARP,TIPARP-AS1
SE_02_076900345 chr3:156665052-156707067 Sample_02_0769 Ovary HEYA8 345 27 917 82 6 298 998 TIPARP,TIPARP-AS1
SE_02_105900750 chr3:156665065-156700890 Sample_02_1059 Bone A673_WT 750 19 798 70 4 221 744 TIPARP,TIPARP-AS1
SE_02_147300750 chr3:156665065-156700890 Sample_02_1473 Bone A-673 750 19 798 70 4 221 744 TIPARP,TIPARP-AS1
SE_02_049400731 chr3:156668152-156687442 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 731 8 432 38 3 163 672 TIPARP,TIPARP-AS1
SE_02_047900488 chr3:156668211-156730498 Sample_02_0479 Head and neck SCC25 488 37 1308 129 8 331 998 TIPARP,TIPARP-AS1
SE_02_143200371 chr3:156668320-156765557 Sample_02_1432 Bone A673 STAG2 WT 371 25 2135 227 13 440 1420 TIPARP,TIPARP-AS1,LINC00886,PA2G4P4
SE_02_147600588 chr3:156668361-156693185 Sample_02_1476 Bone EW-1 588 4 560 53 4 178 672 TIPARP,TIPARP-AS1
SE_02_153300387 chr3:156668440-156694088 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 387 5 585 54 4 184 686 TIPARP,TIPARP-AS1
SE_02_151200124 chr3:156668462-156711182 Sample_02_1512 Lung Purified AT2 cells 124 10 931 79 6 290 998 TIPARP,TIPARP-AS1
SE_02_141000619 chr3:156668549-156693564 Sample_02_1410 Brain GSC6 619 5 564 53 4 178 672 TIPARP,TIPARP-AS1
SE_02_076200974 chr3:156669612-156730231 Sample_02_0762 Podocyte podocyte_CTL 974 16 1275 126 8 328 998 TIPARP,TIPARP-AS1
SE_02_048101704 chr3:156672071-156723719 Sample_02_0481 Mammary gland MDA-MB231 1704 36 1098 108 7 284 998 TIPARP,TIPARP-AS1
SE_02_125800488 chr3:156673509-156694190 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 488 10 476 44 3 176 651 TIPARP,TIPARP-AS1
SE_02_074700505 chr3:156673529-156723431 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 505 22 1060 104 6 279 945 TIPARP,TIPARP-AS1
SE_02_136500975 chr3:156673613-156693886 Sample_02_1365 Pancreas AsPC1-untreated 975 10 467 43 3 167 615 TIPARP,TIPARP-AS1
SE_02_120000959 chr3:156673632-156682393 Sample_02_1200 Brain GBM36 959 3 205 22 2 117 611 TIPARP,TIPARP-AS1
SE_02_088601612 chr3:156673667-156728778 Sample_02_0886 Skin foreskin_ p63KLF4 1612 15 1158 118 7 312 934 TIPARP,TIPARP-AS1
SE_02_097200234 chr3:156673680-156693532 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 234 11 453 43 3 167 607 TIPARP,TIPARP-AS1
SE_02_113801012 chr3:156673724-156695683 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 1012 12 507 47 3 181 637 TIPARP,TIPARP-AS1
SE_02_088300910 chr3:156673734-156719575 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 910 15 990 94 6 278 931 TIPARP,TIPARP-AS1
SE_02_113900896 chr3:156673789-156694690 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 896 10 483 45 3 179 634 TIPARP,TIPARP-AS1
SE_02_127800582 chr3:156673795-156733420 Sample_02_1278 Chordoma UCH1_DMSO_48h 582 16 1248 122 7 332 927 TIPARP,TIPARP-AS1
SE_02_044800646 chr3:156673819-156696546 Sample_02_0448 Bone MNNG 646 12 524 47 3 184 668 TIPARP,TIPARP-AS1
SE_02_065900430 chr3:156673885-156728866 Sample_02_0659 Lung H23 430 33 1154 116 7 313 916 TIPARP,TIPARP-AS1
SE_02_087800737 chr3:156673911-156717332 Sample_02_0878 Ovary SVOG3e cells_noDox_control 737 13 937 84 6 278 915 TIPARP,TIPARP-AS1
SE_02_088201227 chr3:156673932-156723135 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1227 18 1043 102 6 278 914 TIPARP,TIPARP-AS1
SE_02_137700199 chr3:156674533-156730044 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 199 32 1150 112 7 291 790 TIPARP,TIPARP-AS1
SE_02_045300737 chr3:156674537-156720704 Sample_02_0453 Neuroblastoma SJNB3 737 11 978 90 6 254 790 TIPARP,TIPARP-AS1
SE_02_072100080 chr3:156674568-156726986 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 80 26 1093 110 7 279 781 TIPARP,TIPARP-AS1
SE_02_065000818 chr3:156674574-156692902 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 818 3 415 36 3 136 454 TIPARP,TIPARP-AS1
SE_02_048000311 chr3:156674584-156730737 Sample_02_0480 Gingival epithelial HGEP 311 27 1165 113 7 288 778 TIPARP,TIPARP-AS1
SE_02_056900333 chr3:156674591-156729896 Sample_02_0569 Periodontal ligament mesenchymal stem cell 333 40 1150 112 7 285 777 TIPARP,TIPARP-AS1
SE_02_077600621 chr3:156674602-156693725 Sample_02_0776 Pancreas EndoC-BH1 621 2 431 37 3 136 449 TIPARP,TIPARP-AS1
SE_02_117400885 chr3:156674604-156691049 Sample_02_1174 Brain GBM02 885 8 368 33 3 134 448 TIPARP,TIPARP-AS1
SE_02_137800263 chr3:156674620-156728171 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 263 29 1111 111 7 277 772 TIPARP,TIPARP-AS1
SE_02_076600553 chr3:156674633-156719033 Sample_02_0766 Ovary PEO1 553 19 952 86 6 247 771 TIPARP,TIPARP-AS1
Genomic distribution of SEs associated with TIPARP-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of TIPARP-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)