SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000136478
Gene: TEX2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:64147227-64263260 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_013100251 chr17:64081460-64148017 Sample_02_0131 Lung 1015_PT 251 17 1706 110 4 190 428 SNORA76,SNORD104,ERN1,TEX2
SE_02_013200237 chr17:64081543-64149216 Sample_02_0132 Lung 1015_CL 237 8 1735 111 4 205 573 SNORA76,SNORD104,ERN1,TEX2
SE_02_011500162 chr17:64131198-64162275 Sample_02_0115 Mammary gland MCF-7 162 3 752 48 1 107 622 SNORA76,SNORD104,TEX2,ERN1
SE_02_040300408 chr17:64143560-64160151 Sample_02_0403 Mammary gland T-47D_untreat 408 5 432 30 0 71 562 SNORA76,SNORD104,TEX2,ERN1
SE_02_000200383 chr17:64143591-64151482 Sample_02_0002 Mammary gland MCF-7_10Gygamma_2.5h 383 1 217 12 0 38 404 SNORA76,SNORD104,TEX2,ERN1
SE_02_017000534 chr17:64144077-64160112 Sample_02_0170 Prostate LNCaP_R1881_DOX 534 4 420 29 0 71 562 SNORA76,SNORD104,TEX2,ERN1
SE_02_030600207 chr17:64144317-64218699 Sample_02_0306 Autonomic ganglia SH-SY5Y 207 11 1892 199 9 263 1240 SNORA76,SNORD104,TEX2,ERN1
SE_02_031000721 chr17:64144364-64157258 Sample_02_0310 Neuroblastoma SJNB8 721 3 347 21 0 60 562 SNORA76,SNORD104,TEX2,ERN1
SE_02_029700645 chr17:64144400-64157629 Sample_02_0297 Neuroblastoma CLB-CAR 645 1 359 22 0 64 562 SNORA76,SNORD104,TEX2,ERN1
SE_01_001200571 chr17:64144449-64149001 Sample_01_0012 Lung A549_dexamethasone_1h 571 1 134 2 0 25 330 SNORA76,SNORD104,TEX2,ERN1
SE_01_009000823 chr17:64144525-64181247 Sample_01_0090 Lung upper-lobe-of-left-lung 823 6 984 102 3 135 736 SNORA76,SNORD104,TEX2,ERN1
SE_02_062500322 chr17:64144607-64148801 Sample_02_0625 Mammary gland WS8_4OHT 322 1 125 2 0 18 300 SNORA76C,SNORD104,TEX2,SNHG25,ERN1
SE_01_007600800 chr17:64144664-64166055 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 800 1 531 35 1 102 622 SNORA76,SNORD104,TEX2,ERN1
SE_01_007300743 chr17:64144731-64187152 Sample_01_0073 Coronary artery coronary-artery 743 8 1147 129 5 137 736 SNORA76,SNORD104,TEX2,ERN1
SE_02_062700329 chr17:64144740-64148865 Sample_02_0627 Mammary gland WS8_VEH 329 1 124 2 0 18 310 SNORA76C,SNORD104,TEX2,SNHG25,ERN1
SE_00_004100640 chr17:64144783-64165954 Sample_00_0041 Stomach stomach_3y 640 5 529 35 1 102 622 SNORA76,SNORD104,TEX2,ERN1
SE_00_002500892 chr17:64144785-64160014 Sample_00_0025 Muscle of leg muscle-of-leg 892 4 407 26 0 71 562 SNORA76,SNORD104,TEX2,ERN1
SE_02_025100445 chr17:64144789-64191129 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 445 6 1285 140 7 146 835 SNORA76,SNORD104,TEX2,ERN1
SE_02_034000387 chr17:64144793-64179449 Sample_02_0340 Brain BE2C_2 387 4 914 87 3 128 736 SNORA76,SNORD104,TEX2,ERN1
SE_01_007100316 chr17:64144797-64178707 Sample_01_0071 Pancreas body-of-pancreas 316 7 882 80 3 128 736 SNORA76,SNORD104,TEX2,ERN1
SE_01_009400630 chr17:64144851-64162522 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 630 1 457 27 0 96 622 SNORA76C,SNORD104,TEX2,SNHG25,ERN1
SE_00_003400669 chr17:64144854-64157396 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 669 4 343 20 0 62 562 SNORA76,SNORD104,TEX2,ERN1
SE_02_021200104 chr17:64144855-64149578 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 104 1 146 3 0 32 357 SNORA76,SNORD104,TEX2,ERN1
SE_00_002200888 chr17:64144869-64176472 Sample_00_0022 Lung lung_30y 888 7 825 71 3 117 678 SNORA76,SNORD104,TEX2,ERN1
SE_02_003601606 chr17:64144955-64149412 Sample_02_0036 Embryo H7 1606 1 138 3 0 32 357 SNORA76,SNORD104,TEX2,ERN1
SE_00_004200509 chr17:64144972-64167335 Sample_00_0042 Stomach stomach_30y 509 9 561 38 1 102 622 SNORA76,SNORD104,TEX2,ERN1
SE_00_004000922 chr17:64145040-64157172 Sample_00_0040 Spleen spleen_30y 922 3 339 20 0 60 562 SNORA76,SNORD104,TEX2,ERN1
SE_00_002600835 chr17:64145115-64159669 Sample_00_0026 Muscle of trunk muscle-of-trunk 835 4 396 26 0 65 562 SNORA76,SNORD104,TEX2,ERN1
SE_02_032800581 chr17:64145127-64149267 Sample_02_0328 Embryo H9_naive 581 1 129 2 0 32 356 SNORA76,SNORD104,TEX2,ERN1
SE_00_003200259 chr17:64145431-64179194 Sample_00_0032 Psoas muscle psoas-muscle_30y 259 6 891 82 3 128 736 SNORA76,SNORD104,TEX2,ERN1
SE_02_110400564 chr17:64145482-64149176 Sample_02_1104 Brain NB-69 564 1 123 2 0 32 351 SNORA76C,SNORD104,TEX2,SNHG25,ERN1
SE_02_066700150 chr17:64145864-64148717 Sample_02_0667 Mammary gland MCF7_FA 150 1 102 2 0 16 291 SNORA76C,SNORD104,TEX2,SNHG25,ERN1
SE_00_003300269 chr17:64145904-64179097 Sample_00_0033 Psoas muscle psoas-muscle_3y 269 7 874 81 3 124 735 SNORA76,SNORD104,TEX2,ERN1
SE_02_036700303 chr17:64147781-64241456 Sample_02_0367 Skeletal muscle NS129 303 13 2326 244 10 280 1122 TEX2,SNORA76,SNORD104,ERN1
SE_02_036800156 chr17:64147838-64283067 Sample_02_0368 Skeletal muscle NS134 156 24 3288 323 13 358 1275 TEX2,SNORA76,SNORD104,ERN1,PECAM1
SE_02_074700136 chr17:64147850-64290459 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 136 79 3511 342 13 358 1275 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_093600074 chr17:64148024-64265642 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 74 45 2850 288 10 340 1266 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_00_004600535 chr17:64148180-64217870 Sample_00_0046 Heart right ventricle_34y 535 23 1766 196 9 246 1009 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_00_005800673 chr17:64148184-64166046 Sample_00_0058 Stomach stomach 34y 673 8 423 34 1 86 390 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_091900624 chr17:64148195-64177543 Sample_02_0919 Heart left ventricle_DCM_LV1532 624 12 745 73 3 108 487 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_089900813 chr17:64148247-64177496 Sample_02_0899 Heart left ventricle_LV1400 813 11 743 73 3 106 479 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_120500992 chr17:64148346-64180694 Sample_02_1205 Brain NB3 992 20 857 94 3 115 484 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_089201406 chr17:64150135-64159427 Sample_02_0892 Heart left ventricle_LV1215 1406 1 233 20 0 33 205 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_053301261 chr17:64150520-64186332 Sample_02_0533 Blood vessel Circle of Willis_54y 1261 8 948 121 5 105 379 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_00_003000379 chr17:64150696-64165620 Sample_00_0030 Pancreas pancreas 379 5 347 28 1 70 262 TEX2,SNORA76,SNORD104,ERN1
SE_02_092001118 chr17:64151445-64158468 Sample_02_0920 Heart left ventricle_DCM_LV1535 1118 1 184 15 0 26 158 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_093500049 chr17:64154410-64260953 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 49 41 2575 266 10 276 835 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_155100081 chr17:64155524-64265868 Sample_02_1551 Gastrointestinal Stromal MaMel 81 21 2653 272 10 304 910 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_123500584 chr17:64155584-64190905 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 584 9 980 122 7 93 273 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_077000660 chr17:64155587-64223638 Sample_02_0770 Ovary OVCA429_shLuc 660 21 1696 187 9 212 678 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_062200552 chr17:64170769-64188263 Sample_02_0622 Blood EOL1_Naive 552 10 541 82 3 37 163 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_029700129 chr17:64172695-64264542 Sample_02_0297 Neuroblastoma CLB-CAR 129 14 2205 228 8 239 794 TEX2,SNORA76,SNORD104,ERN1
SE_02_149400341 chr17:64172751-64186145 Sample_02_1494 Other monocyte-derived dendritic cells_0h 341 11 401 70 3 25 58 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_035900806 chr17:64173392-64241521 Sample_02_0359 Colon Colo741 806 8 1694 188 8 177 636 TEX2,SNORA76,SNORD104,ERN1
SE_00_000300392 chr17:64173411-64242047 Sample_00_0003 Adrenal gland adrenal-gland_97d 392 8 1706 189 8 177 636 TEX2,SNORA76,SNORD104,ERN1
SE_02_133200446 chr17:64173565-64202545 Sample_02_1332 Blood Monomac6_CTRL 446 7 799 112 6 58 277 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_118500086 chr17:64173747-64282982 Sample_02_1185 Brain GBM14 86 30 2641 266 11 254 794 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_018300510 chr17:64173810-64219197 Sample_02_0183 Skin SKMEL2 510 9 1154 140 7 148 562 TEX2,SNORA76,SNORD104,ERN1
SE_02_026500266 chr17:64173818-64247297 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 266 10 1817 195 8 184 636 TEX2,SNORA76,SNORD104,ERN1
SE_02_018500329 chr17:64173841-64231682 Sample_02_0185 Skin UACC257 329 8 1453 166 7 160 636 TEX2,SNORA76,SNORD104,ERN1
SE_02_031700553 chr17:64173969-64265691 Sample_02_0317 Neuroblastoma GICAN 553 13 2207 231 8 241 794 TEX2,SNORA76,SNORD104,ERN1
SE_01_011500529 chr17:64173973-64216908 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 529 13 1109 138 7 145 562 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_134500657 chr17:64174007-64187506 Sample_02_1345 Leukophereses leukophereses_p358 657 8 421 74 3 22 58 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_00_002001438 chr17:64174019-64218543 Sample_00_0020 Large intestine large-intestine_108d 1438 6 1137 139 7 148 562 TEX2,SNORA76,SNORD104,ERN1
SE_02_021001092 chr17:64174046-64201116 Sample_02_0210 Lung MRC-5_N_1DPT 1092 5 759 107 6 57 277 TEX2,SNORA76,SNORD104,ERN1
SE_02_021100867 chr17:64174095-64190865 Sample_02_0211 Lung MRC-5_NFD_1DPT 867 6 529 80 5 31 157 TEX2,SNORA76,SNORD104,ERN1
SE_02_061100416 chr17:64174103-64179212 Sample_02_0611 Liposarcoma DDLPS_T1 416 1 148 23 1 13 58 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_074100173 chr17:64174132-64204075 Sample_02_0741 Muscle RH30 173 7 813 111 6 68 277 TEX2,SNORA76C,SNHG25,ERN1,SNORD104
SE_02_077600261 chr17:64174409-64264476 Sample_02_0776 Pancreas EndoC-BH1 261 15 2163 222 8 236 794 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_092300391 chr17:64174551-64244485 Sample_02_0923 Heart fetal heart_PCW10_12522 391 26 1747 183 7 176 636 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_092500638 chr17:64174598-64244377 Sample_02_0925 Heart fetal heart_PCW17_12570 638 21 1743 183 7 176 636 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_043000171 chr17:64175138-64241090 Sample_02_0430 Kidney 12364284 171 15 1631 175 7 176 636 TEX2,SNORA76,SNORD104,ERN1
SE_02_031500375 chr17:64175702-64191675 Sample_02_0315 Neuroblastoma TR14 375 3 495 73 5 30 157 TEX2,SNORA76,SNORD104,ERN1
SE_02_092200415 chr17:64178036-64250089 Sample_02_0922 Heart fetal heart_PCW10_12434 415 26 1761 182 7 176 578 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_092100348 chr17:64178126-64251175 Sample_02_0921 Heart embryonic heart_CS22 348 25 1775 183 7 180 578 TEX2,SNHG25,SNORA76C,SNORD104,ERN1
SE_02_042800409 chr17:64183494-64216259 Sample_02_0428 Kidney 12364284_VHL- 409 8 788 78 5 123 504 TEX2,SNORD104,SNORA76
SE_02_006900639 chr17:64183899-64263960 Sample_02_0069 Brain SF268 639 12 1847 162 5 215 736 TEX2,SNORD104,SNORA76
SE_02_151500268 chr17:64184123-64262392 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 268 14 1797 159 5 195 578 TEX2,SNHG25,SNORA76C,SNORD104
SE_02_008900200 chr17:64185034-64245413 Sample_02_0089 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 200 11 1432 125 5 157 578 TEX2,SNORD104,SNORA76
SE_02_038100306 chr17:64189862-64264030 Sample_02_0381 Heart purified cardiomyocyte WT 306 12 1654 146 4 205 637 TEX2,SNORD104,SNORA76
SE_02_093700718 chr17:64190216-64196875 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 718 1 156 20 2 26 120 TEX2,SNHG25,SNORA76C,SNORD104
SE_02_149300574 chr17:64191982-64218327 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 574 5 568 55 1 117 405 TEX2,SNHG25,SNORA76C,SNORD104
SE_02_024300302 chr17:64195352-64246826 Sample_02_0243 Foreskin foreskin_HFFs 302 8 1167 99 2 132 359 TEX2,SNORD104,SNORA76
SE_02_009100138 chr17:64195838-64245901 Sample_02_0091 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 138 8 1138 90 2 125 359 TEX2,SNORD104,SNORA76
SE_02_008800161 chr17:64195955-64245924 Sample_02_0088 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 161 12 1138 90 2 125 359 TEX2,SNORD104,SNORA76
SE_02_026400782 chr17:64196100-64242340 Sample_02_0264 Skeletal muscle 7250-empty 782 6 1045 89 2 120 359 TEX2,SNORA76
SE_02_083901290 chr17:64196360-64217982 Sample_02_0839 Embryo hNPCs_K755R/+ 1290 6 470 40 1 92 285 TEX2
SE_02_010500327 chr17:64199863-64241866 Sample_02_0105 Skin neonatal_keratinocytes 327 7 952 81 2 120 359 TEX2
SE_02_006300738 chr17:64199918-64241849 Sample_02_0063 Skin Keratinocytes 738 6 952 81 2 120 359 TEX2
SE_02_076600205 chr17:64201497-64282564 Sample_02_0766 Ovary PEO1 205 27 1864 156 5 196 517 TEX2
SE_01_007300681 chr17:64202460-64264125 Sample_01_0073 Coronary artery coronary-artery 681 15 1378 114 2 177 517 TEX2
SE_02_108400248 chr17:64208257-64217914 Sample_02_1084 Blood KBM7-derived near haploid cells 248 6 224 18 1 71 285 TEX2
SE_02_001600689 chr17:64211190-64241451 Sample_02_0016 Blood erythroblasts 689 4 709 57 2 95 359 TEX2
SE_02_009200362 chr17:64212307-64245515 Sample_02_0092 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_3 362 7 782 57 1 98 359 TEX2
SE_01_008700720 chr17:64213920-64254630 Sample_01_0087 Thyroid gland thyroid-gland 720 6 922 70 1 70 147 TEX2
SE_02_005600353 chr17:64215770-64265420 Sample_02_0056 Mammary gland HMEC 353 12 1119 94 1 97 232 TEX2
SE_02_077501025 chr17:64216334-64268047 Sample_02_0775 Pancreas EndoC-BH1_SE 1025 18 1162 98 1 99 232 TEX2
SE_02_093800824 chr17:64228637-64233316 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 824 1 104 10 0 12 74 TEX2
SE_02_005700710 chr17:64229088-64263339 Sample_02_0057 Mammary gland vHMEC 710 8 755 63 1 82 185 TEX2
SE_00_005300359 chr17:64237187-64260722 Sample_00_0053 Embryo trophoblast cell originated from H1 359 12 522 44 1 39 0 TEX2
SE_02_077001117 chr17:64237299-64263260 Sample_02_0770 Ovary OVCA429_shLuc 1117 21 574 48 1 62 82 TEX2
SE_02_150200996 chr17:64238560-64261293 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 996 3 486 42 1 40 0 TEX2
SE_02_053301354 chr17:64238696-64263235 Sample_02_0533 Blood vessel Circle of Willis_54y 1354 11 533 45 1 62 72 TEX2
SE_02_057101080 chr17:64240213-64260920 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 1080 10 443 36 1 32 0 TEX2
SE_02_015000572 chr17:64251195-64264226 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 572 1 269 24 0 44 158 TEX2
Genomic distribution of SEs associated with TEX2
Genome Browser

The strength of the tissue affected by the gene

Expression of TEX2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)