SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000266173
Gene: STRADA Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:63682336-63741986 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_153000488 chr17:63623050-63707875 Sample_02_1530 Peripheral blood neutrophils_0BA0X 488 24 2134 153 8 374 3827 STRADA,MAP3K3,LOC729683,LIMD2,TACO1
SE_02_023401089 chr17:63656816-63714276 Sample_02_0234 Tonsil Th17 1089 10 1482 104 4 271 3825 STRADA,MAP3K3,LIMD2
SE_02_110300189 chr17:63661869-63707453 Sample_02_1103 Brain NB-1643 189 20 1179 80 4 253 3572 STRADA,MAP3K3,LOC729683,LIMD2
SE_01_008400210 chr17:63664404-63717310 Sample_01_0084 Spleen spleen 210 7 1359 92 5 263 3792 STRADA,MAP3K3,LIMD2
SE_00_003900098 chr17:63665175-63706661 Sample_00_0039 Spleen spleen_3y 98 5 1049 67 4 243 3444 STRADA,MAP3K3,LIMD2
SE_02_029700348 chr17:63672139-63703810 Sample_02_0297 Neuroblastoma CLB-CAR 348 3 785 49 4 199 3064 STRADA,MAP3K3,LIMD2
SE_02_029600560 chr17:63673133-63703753 Sample_02_0296 Neuroblastoma CLB-BER-Lud 560 4 766 48 4 198 3053 STRADA,MAP3K3,LIMD2
SE_02_030600433 chr17:63673498-63703323 Sample_02_0306 Autonomic ganglia SH-SY5Y 433 3 747 46 4 191 2973 STRADA,MAP3K3,LIMD2
SE_02_155100590 chr17:63673785-63702848 Sample_02_1551 Gastrointestinal Stromal MaMel 590 7 727 45 4 184 2899 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_143200665 chr17:63674309-63707263 Sample_02_1432 Bone A673 STAG2 WT 665 18 845 57 4 206 3472 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_054000195 chr17:63674350-63707291 Sample_02_0540 Brain SK-N-BE_2_-C_PI3K_engineered 195 13 844 57 4 208 3477 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_148000642 chr17:63674606-63705818 Sample_02_1480 Bone MHH-ES-1 642 8 791 52 4 200 3341 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_053900120 chr17:63674624-63715415 Sample_02_0539 Brain SK-N-BE_2_-C_GFP_control 120 17 1062 76 4 222 3726 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_124600279 chr17:63674653-63707293 Sample_02_1246 Brain LAN5_ATRA 279 11 832 57 4 208 3478 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_143300477 chr17:63675400-63708780 Sample_02_1433 Bone A673 STAG2 null 477 11 862 62 4 208 3519 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_097100266 chr17:63675541-63707167 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 266 7 799 55 4 201 3445 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_104800393 chr17:63676076-63714080 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 393 19 980 71 4 210 3700 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_032100648 chr17:63681348-63706977 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 648 3 651 46 4 176 3416 STRADA,MAP3K3,LIMD2
SE_02_104602560 chr17:63681666-63707386 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2560 8 655 48 4 182 3474 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_143100752 chr17:63681990-63707168 Sample_02_1431 Blood T cell 752 3 641 48 4 176 3366 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_075000274 chr17:63682263-63706083 Sample_02_0750 Lymphoma Rec-1_GSI 274 6 606 43 4 170 3245 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_110600246 chr17:63692055-63705083 Sample_02_1106 Brain NGP 246 6 373 23 1 117 2636 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_104200329 chr17:63692445-63719796 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 329 10 761 55 3 130 2951 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_025200122 chr17:63692882-63704579 Sample_02_0252 Neuroblastoma IMR5-75-shMYCN-MYCN_high 122 1 331 19 1 107 2428 STRADA,MAP3K3,LIMD2
SE_02_002200278 chr17:63693099-63707558 Sample_02_0022 Blood CD8donorA 278 9 406 28 1 120 2706 STRADA,MAP3K3,LIMD2
SE_02_027500514 chr17:63693244-63703470 Sample_02_0275 Retina FW14 514 2 286 17 1 97 2184 STRADA,MAP3K3,LIMD2
SE_02_078100494 chr17:63693670-63707118 Sample_02_0781 Lymphoma Pfeiffer_DMSO 494 5 377 27 1 112 2556 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_012200252 chr17:63693847-63703515 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 252 1 271 16 1 93 2106 STRADA,MAP3K3,LIMD2
SE_00_002700804 chr17:63694050-63710224 Sample_00_0027 Blood natural-killer-cell 804 3 448 35 1 115 2571 STRADA,MAP3K3,LIMD2
SE_02_123500292 chr17:63694272-63703013 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 292 5 237 14 1 88 1929 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_002300336 chr17:63694318-63710033 Sample_02_0023 Blood CD8donorC 336 11 432 34 1 112 2517 STRADA,MAP3K3,LIMD2
SE_02_103400646 chr17:63694466-63707025 Sample_02_1034 Blood AML cell 646 4 347 24 1 103 2382 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_115600388 chr17:63694492-63706174 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 388 5 325 21 1 98 2305 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_104000552 chr17:63694502-63707206 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 552 11 353 26 1 103 2421 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_106500507 chr17:63694556-63703026 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 507 2 230 14 1 86 1880 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_059100249 chr17:63694710-63707876 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 249 5 363 25 0 110 2443 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_078200624 chr17:63694926-63703140 Sample_02_0782 Blood MEC1 624 3 223 12 0 87 1812 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_078300658 chr17:63694982-63703000 Sample_02_0783 Blood MEC2 658 2 218 12 0 84 1782 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_002400354 chr17:63695096-63707537 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 354 9 348 24 0 107 2357 STRADA,MAP3K3,LIMD2
SE_00_005500435 chr17:63695131-63716995 Sample_00_0055 Spleen spleen 34y 435 8 609 46 1 116 2554 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_104900309 chr17:63695374-63705430 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 309 1 279 17 0 82 2147 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_082601695 chr17:63695382-63708454 Sample_02_0826 Stomach gastric tumor 1695 10 370 29 0 95 2325 STRADA,MAP3K3,LOC729683,LIMD2
SE_00_005600629 chr17:63695413-63707785 Sample_00_0056 Sigmoid colon sigmoid colon 3y 629 7 345 25 0 94 2324 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_121800260 chr17:63695414-63706227 Sample_02_1218 Bone marrow Daudi 260 4 304 21 0 82 2146 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_135000511 chr17:63695738-63707421 Sample_02_1350 Leukophereses leukophereses_p456 511 6 325 24 0 90 2222 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_083500573 chr17:63696032-63710224 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 573 7 396 31 0 86 2197 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_134000680 chr17:63696130-63716937 Sample_02_1340 Blood acute myeloid leukemia 680 8 580 45 1 96 2381 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_061700722 chr17:63696198-63703032 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 722 1 192 10 0 61 1567 STRADA,MAP3K3,LOC729683,LIMD2
SE_02_083300744 chr17:63696200-63710442 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 744 5 403 31 0 86 2176 STRADA,MAP3K3,LOC729683,LIMD2
SE_01_005200267 chr17:63696273-63706432 Sample_01_0052 Blood neutrophil 267 2 292 19 0 72 1974 STRADA,MAP3K3,LIMD2
SE_02_075100272 chr17:63696315-63706069 Sample_02_0751 Lymphoma Rec-1_WO 272 3 281 17 0 70 1970 STRADA,LOC729683,LIMD2
SE_02_033700564 chr17:63696374-63703491 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 564 1 204 11 0 59 1611 STRADA,LIMD2
SE_02_022200495 chr17:63696494-63703824 Sample_02_0222 Blood DU-528 495 1 209 11 0 62 1661 STRADA,LIMD2
SE_02_059300204 chr17:63696534-63707476 Sample_02_0593 Fetal spleenocytes fetal naive T cells 204 6 312 22 0 82 2082 STRADA,LOC729683,LIMD2
SE_02_050200308 chr17:63696536-63706177 Sample_02_0502 Blood HL-60_PMA_16h 308 3 275 17 0 70 1915 STRADA,LOC729683,LIMD2
SE_02_045400693 chr17:63696561-63710100 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 693 2 379 30 0 82 2091 STRADA,LOC729683,LIMD2
SE_02_092700520 chr17:63696642-63706947 Sample_02_0927 Peripheral blood neutrophils_US 520 4 292 20 0 75 1972 STRADA,LOC729683,LIMD2
SE_02_045900209 chr17:63696693-63707002 Sample_02_0459 Blood ME-1_DMSO_6h 209 2 293 20 0 75 1962 STRADA,LOC729683,LIMD2
SE_02_046000714 chr17:63696709-63707134 Sample_02_0460 Blood ME-1_I-10-49_6h 714 4 296 22 0 75 1975 STRADA,LOC729683,LIMD2
SE_02_068200277 chr17:63696796-63714095 Sample_02_0682 Blood Kasumi-1 277 4 496 38 0 91 2228 STRADA,LOC729683,LIMD2
SE_02_110400612 chr17:63696840-63702937 Sample_02_1104 Brain NB-69 612 2 173 10 0 56 1424 STRADA,LOC729683,LIMD2
SE_02_122500504 chr17:63696848-63703218 Sample_02_1225 Bone marrow RAJI 504 3 179 9 0 59 1468 STRADA,LOC729683,LIMD2
SE_02_104400376 chr17:63696932-63712687 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 376 4 451 33 0 89 2125 STRADA,LOC729683,LIMD2
SE_02_139300556 chr17:63697004-63707805 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 556 5 302 22 0 82 2008 STRADA,LOC729683,LIMD2
SE_02_102800058 chr17:63697025-63703172 Sample_02_1028 Blood HL-60_WT 58 2 167 9 0 59 1433 STRADA,LOC729683,LIMD2
SE_02_050100376 chr17:63697391-63703694 Sample_02_0501 Blood HL-60_CTRL 376 2 172 10 0 59 1460 STRADA,LOC729683,LIMD2
SE_02_139400191 chr17:63697582-63713904 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 191 2 458 37 0 90 2052 STRADA,LOC729683,LIMD2
SE_02_134300276 chr17:63697600-63703060 Sample_02_1343 Leukophereses leukophereses_p195 276 1 144 9 0 58 1308 STRADA,LOC729683,LIMD2
SE_02_139000868 chr17:63697834-63703134 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 868 2 139 9 0 57 1264 STRADA,LOC729683,LIMD2
SE_02_059200203 chr17:63698091-63706648 Sample_02_0592 PBMCs adult CD4+CD25hiCD127lo regulatory T cells 203 2 237 18 0 69 1632 STRADA,LOC729683,LIMD2
SE_02_104701774 chr17:63700265-63702975 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1774 1 63 6 0 6 607 STRADA,LOC729683,LIMD2
Genomic distribution of SEs associated with STRADA
Genome Browser

The strength of the tissue affected by the gene

Expression of STRADA

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)