SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000145687
Gene: SSBP2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:81413021-81751797 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_032700361 chr5:81390278-81426605 Sample_02_0327 Liver hepatocytes_d6 361 5 890 70 1 66 374 RNU5E,RNU5D,ACOT12,SSBP2
SE_02_032500536 chr5:81390546-81425985 Sample_02_0325 Liver hepatocytes_d1 536 5 876 70 1 66 374 RNU5E,RNU5D,ACOT12,SSBP2
SE_02_032600625 chr5:81390695-81425814 Sample_02_0326 Liver hepatocytes_d3 625 4 869 70 1 64 374 RNU5E,RNU5D,ACOT12,SSBP2
SE_02_141001191 chr5:81391052-81429066 Sample_02_1410 Brain GSC6 1191 8 935 74 1 71 403 ACOT12,SSBP2
SE_02_149300491 chr5:81404215-81429553 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 491 8 618 35 1 57 240 SSBP2,ACOT12,ZCCHC9
SE_02_152201170 chr5:81407490-81427694 Sample_02_1522 Skin A375 RTKi 1170 5 494 25 1 47 211 SSBP2,ACOT12
SE_02_138801162 chr5:81408101-81426865 Sample_02_1388 Peripheral blood JB6_ALK+ 1162 5 453 20 1 46 211 SSBP2,ACOT12
SE_02_152100714 chr5:81408198-81430206 Sample_02_1521 Skin A375 DMSO 714 5 524 28 1 57 240 SSBP2,ACOT12
SE_02_017200662 chr5:81409398-81430207 Sample_02_0172 Lung IMR-90_quiescent 662 2 498 27 1 51 240 RNU5E,RNU5D,SSBP2,ACOT12
SE_02_059401506 chr5:81416315-81428165 Sample_02_0594 iPSC-derived neural progenitors 1506 4 284 9 1 26 211 SSBP2,ACOT12
SE_02_017100653 chr5:81417007-81429591 Sample_02_0171 Lung IMR-90_proliferating 653 3 299 12 1 36 240 RNU5E,RNU5D,SSBP2,ACOT12
SE_02_097200682 chr5:81418177-81426809 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 682 2 203 5 1 25 156 SSBP2,ACOT12
SE_02_094100462 chr5:81419213-81430101 Sample_02_0941 Brain T98G 462 5 256 12 1 36 120 SSBP2,ACOT12
SE_02_145201097 chr5:81419747-81426459 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1097 2 158 3 1 23 54 SSBP2,ACOT12
SE_01_002100142 chr5:81421161-81451668 Sample_01_0021 Skin bipolar-neuron 142 4 662 32 1 65 197 RNU5E,RNU5D,SSBP2,ACOT12
SE_02_143100803 chr5:81504305-81659530 Sample_02_1431 Blood T cell 803 30 3685 167 0 135 118 SSBP2
SE_02_103400132 chr5:81504408-81654329 Sample_02_1034 Blood AML cell 132 23 3562 163 0 135 118 SSBP2
SE_02_003100602 chr5:81506180-81608433 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 602 22 2563 124 0 77 46 SSBP2,ACOT12
SE_01_004400577 chr5:81533147-81603406 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 577 8 1863 94 0 50 0 SSBP2,ACOT12
SE_02_111200589 chr5:81536751-81608458 Sample_02_1112 T lymphocyte THP-6 T-ALL 589 18 1896 104 0 50 0 SSBP2,ACOT12
SE_02_007600742 chr5:81575171-81581860 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 742 2 181 11 0 15 0 SSBP2
SE_02_022200266 chr5:81603631-81643548 Sample_02_0222 Blood DU-528 266 4 812 45 0 42 52 SSBP2
SE_02_003100276 chr5:81624321-81654863 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 276 7 663 19 0 51 53 SSBP2
SE_02_017600394 chr5:81624694-81654942 Sample_02_0176 Peripheral blood LOUCY 394 5 656 19 0 50 53 SSBP2
SE_02_006000350 chr5:81624857-81639822 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 350 3 302 12 0 22 33 SSBP2
SE_01_002500344 chr5:81625094-81667681 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 344 9 961 29 0 52 53 SSBP2
SE_01_004400372 chr5:81625363-81637911 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 372 1 255 11 0 20 33 SSBP2
SE_02_075800326 chr5:81625636-81639746 Sample_02_0758 Peripheral blood REH 326 5 288 12 0 20 33 SSBP2
SE_02_022100470 chr5:81626119-81640117 Sample_02_0221 Blood CCRF-CEM 470 3 283 12 0 20 33 SSBP2
SE_02_024700504 chr5:81626145-81641920 Sample_02_0247 Haematopoietic and lymphoid tissue MOLT4_2 504 3 326 12 0 27 33 SSBP2
SE_02_005800386 chr5:81626247-81639901 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 386 3 281 12 0 20 33 SSBP2
SE_02_036200345 chr5:81626271-81640126 Sample_02_0362 Haematopoietic and lymphoid tissue REH 345 2 282 12 0 20 33 SSBP2
SE_02_111200657 chr5:81626366-81654351 Sample_02_1112 T lymphocyte THP-6 T-ALL 657 7 625 19 0 47 53 SSBP2
SE_02_088500858 chr5:81626611-81637416 Sample_02_0885 Blood NALM6_2 858 4 219 11 0 18 33 SSBP2
SE_02_073900926 chr5:81627346-81638987 Sample_02_0739 Blood Nalm6 926 3 236 10 0 18 33 SSBP2
SE_02_130200526 chr5:81693977-81752170 Sample_02_1302 Lymphoma RL DMSO 526 18 1393 39 0 108 169 SSBP2
SE_02_130300550 chr5:81697163-81760792 Sample_02_1303 Lymphoma RL_tazemetostat 550 22 1517 37 0 196 169 SSBP2
SE_02_130400612 chr5:81710321-81764192 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 612 25 1274 19 0 213 169 SSBP2
SE_02_003100661 chr5:81714814-81752950 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 661 5 908 15 0 102 169 SSBP2
SE_01_008800686 chr5:81748267-81789894 Sample_01_0088 Tibial nerve tibial-nerve 686 5 1028 29 2 293 169 SSBP2
SE_02_028000237 chr5:81748413-81790060 Sample_02_0280 Mammary gland SUM159_DMSO_24h 237 5 1035 29 2 293 169 SSBP2
SE_01_007200715 chr5:81748561-81788959 Sample_01_0072 Breast epithelium breast-epithelium 715 6 999 29 2 288 169 SSBP2
SE_02_127800534 chr5:81748587-81787764 Sample_02_1278 Chordoma UCH1_DMSO_48h 534 8 970 28 2 269 169 SSBP2
SE_01_010700918 chr5:81748623-81788835 Sample_01_0107 Esophagus esophagus squamous epithelium 918 7 996 28 2 287 169 SSBP2
SE_01_008600909 chr5:81748695-81788892 Sample_01_0086 Thoracic aorta thoracic-aorta 909 4 997 29 2 286 169 SSBP2
SE_02_040200254 chr5:81748736-81790142 Sample_02_0402 Mammary gland SUM159PT-ZR-75-1 254 6 1032 29 2 288 169 SSBP2
SE_02_040100267 chr5:81748740-81790105 Sample_02_0401 Mammary gland SUM159PT-T47D 267 7 1031 29 2 288 169 SSBP2
SE_01_009300812 chr5:81749014-81788374 Sample_01_0093 Aorta ascending aorta 812 9 979 28 2 283 169 SSBP2
SE_01_011000736 chr5:81749020-81787878 Sample_01_0110 Aorta thoracic aorta_37y 736 11 966 28 2 271 169 SSBP2
SE_02_120000760 chr5:81749053-81789776 Sample_02_1200 Brain GBM36 760 8 1010 29 2 287 169 SSBP2
SE_02_152200556 chr5:81749128-81799607 Sample_02_1522 Skin A375 RTKi 556 12 1261 44 3 336 169 SSBP2
SE_02_113000434 chr5:81749146-81761555 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 434 5 274 2 0 118 169 SSBP2
SE_02_058600544 chr5:81749214-81789942 Sample_02_0586 Chordal patient-derived chordoma MGH_4 544 10 1014 29 2 286 169 SSBP2
SE_02_048400285 chr5:81749227-81751076 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 285 1 25 0 0 6 63 SSBP2
SE_02_133900043 chr5:81749230-81786151 Sample_02_1339 Bone marrow ficolled whole bone marrow 43 16 923 27 2 257 169 SSBP2
SE_02_074700931 chr5:81749245-81755589 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 931 2 140 0 0 61 169 SSBP2
SE_04_000200686 chr5:81749248-81780399 Sample_04_0002 Blood cold shocked K562 686 4 791 18 2 238 169 SSBP2
SE_02_103300269 chr5:81749248-81788625 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 269 7 980 28 2 283 169 SSBP2
SE_04_000100806 chr5:81749355-81764784 Sample_04_0001 Blood heat shocked K562 806 1 354 2 0 143 169 SSBP2
SE_03_001300803 chr5:81749382-81789912 Sample_03_0013 Lung A549 803 5 1009 29 2 285 169 SSBP2
Genomic distribution of SEs associated with SSBP2
Genome Browser

The strength of the tissue affected by the gene

Expression of SSBP2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)