SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: SPACA6P Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_116900460 chr19:51685740-51694958 Sample_02_1169 Biliary H69_TGF beta_16h_2 460 1 228 16 0 98 527 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_143801226 chr19:51685971-51694962 Sample_02_1438 Liver LSEC 1226 1 222 16 0 98 527 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_116600473 chr19:51686497-51694230 Sample_02_1166 Biliary H69_TGF beta_16h_1 473 1 193 15 0 96 412 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_116800795 chr19:51686949-51694307 Sample_02_1168 Biliary H69_TGF Vehicle_2 795 1 191 14 0 96 429 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_101701950 chr19:51687106-51693713 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1950 1 165 13 0 96 316 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_04_000900360 chr19:51687388-51693602 Sample_04_0009 Lung A549 360 1 153 12 0 93 298 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_111100842 chr19:51687411-51694016 Sample_02_1111 Other HGrC1_SMAD2/3KO 842 1 170 12 0 96 372 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_113600368 chr19:51687423-51693389 Sample_02_1136 Bone U2OS-anaphase/telophase 368 1 145 11 0 93 245 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_143601469 chr19:51687464-51695503 Sample_02_1436 Liver LSEC-Ctrl 1469 1 212 14 1 96 527 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_116700780 chr19:51687503-51693345 Sample_02_1167 Biliary H69_TGF Vehicle_1 780 1 143 11 0 93 235 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_066300843 chr19:51687508-51693678 Sample_02_0663 Thyroid TT 843 1 154 12 0 96 310 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_110500892 chr19:51687658-51694153 Sample_02_1105 Brain NBL-S 892 1 169 12 0 96 397 MIR125A,MIRLET7E,SPACA6P-AS,MIR99B,SPACA6P,HAS1,SIGLEC14
SE_02_086800239 chr19:51703971-51744776 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 239 21 1283 146 3 119 1128 SPACA6P,HAS1,SPACA6P-AS,MIRLET7E,MIR99B,MIR125A,FPR1,FPR2
Genomic distribution of SEs associated with SPACA6P
Genome Browser

The strength of the tissue affected by the gene

Expression of SPACA6P

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)