Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000066117
Gene: SMARCD1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr12:50085200-50100707 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_021101105 chr12:50049770-50096489 Sample_02_0211 Lung MRC-5_NFD_1DPT 1105 5 1109 93 2 429 2782 ACCN2,SMARCD1,GPD1,C12ORF62,RACGAP1
SE_02_132200846 chr12:50059598-50099785 Sample_02_1322 Connective Tissue HT1080_WT 846 6 983 90 2 319 2715 ASIC1,SMARCD1,RACGAP1,GPD1,COX14
SE_02_132000644 chr12:50070720-50100100 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 644 4 727 60 1 281 2674 ASIC1,SMARCD1,RACGAP1,GPD1,COX14
SE_02_103601839 chr12:50081314-50097730 Sample_02_1036 Mammary gland HCC70_XY018 1839 4 422 33 1 162 1376 ASIC1,SMARCD1,GPD1,COX14
SE_02_119700903 chr12:50082864-50111833 Sample_02_1197 Brain GBM33 903 6 731 43 1 256 2711 ASIC1,GPD1,SMARCD1,COX14
SE_01_002700538 chr12:50084054-50090073 Sample_01_0027 Prostate epithelial-cell-of-prostate 538 1 137 15 1 103 655 SMARCD1,GPD1,ACCN2,C12ORF62
SE_02_064801036 chr12:50084387-50090235 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1036 3 132 14 1 103 661 SMARCD1,ASIC1,GPD1,COX14
SE_02_057200767 chr12:50085238-50089824 Sample_02_0572 Brain LN229_1_mM_glucose 767 2 108 10 1 88 556 SMARCD1,ASIC1,GPD1,COX14
SE_02_121200550 chr12:50086824-50112898 Sample_02_1212 Brain GBM30 550 5 666 34 1 181 2305 GPD1,COX14,SMARCD1,ASIC1
SE_02_119800830 chr12:50087066-50111798 Sample_02_1198 Brain GBM34 830 9 634 34 1 173 2111 GPD1,SMARCD1,ASIC1,COX14
SE_02_119601002 chr12:50087098-50111819 Sample_02_1196 Brain GBM32 1002 10 633 34 1 173 2115 GPD1,SMARCD1,ASIC1,COX14
SE_02_117300635 chr12:50087113-50112876 Sample_02_1173 Brain GBM01 635 9 662 34 1 179 2272 GPD1,COX14,SMARCD1,ASIC1
SE_02_120501202 chr12:50087135-50111772 Sample_02_1205 Brain NB3 1202 8 630 34 1 171 2111 GPD1,SMARCD1,ASIC1,COX14
SE_02_096900649 chr12:50087264-50110403 Sample_02_0969 Brain H3.3K27M_PL637 649 8 597 34 1 169 1872 GPD1,SMARCD1,ASIC1,COX14
SE_02_074501189 chr12:50087365-50111650 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1189 4 623 34 1 167 2078 GPD1,SMARCD1,ASIC1,COX14
SE_02_090801523 chr12:50087906-50146019 Sample_02_0908 Heart left ventricle_DCM_LV1262 1523 16 1467 141 2 189 3362 GPD1,SMARCD1,COX14,CERS5,ASIC1
SE_02_121300738 chr12:50087982-50112980 Sample_02_1213 Brain GBM31 738 5 643 34 1 161 2187 GPD1,COX14,SMARCD1,ASIC1
SE_02_036800392 chr12:50090141-50123821 Sample_02_0368 Skeletal muscle NS134 392 4 897 70 0 146 2192 SMARCD1,C12ORF62,GPD1,ACCN2,LASS5
SE_02_036700640 chr12:50090199-50118037 Sample_02_0367 Skeletal muscle NS129 640 4 732 45 0 146 2008 SMARCD1,C12ORF62,GPD1,ACCN2,LASS5
SE_02_074600384 chr12:50090446-50143830 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 384 16 1353 123 1 167 2986 GPD1,SMARCD1,COX14,CERS5,ASIC1
SE_02_120301201 chr12:50095643-50111802 Sample_02_1203 Brain NB1 1201 5 411 15 0 132 1719 GPD1,SMARCD1,ASIC1,COX14
SE_02_004700631 chr12:50097921-50113467 Sample_02_0047 Pancreatic endoderm IIDP/donor790 631 3 389 15 0 133 1815 SMARCD1,C12ORF62,GPD1,ACCN2
SE_02_098900823 chr12:50099943-50136658 Sample_02_0989 Kidney kidney cortex_WT 823 19 935 90 1 133 2278 GPD1,SMARCD1,COX14,CERS5,ASIC1
SE_02_035000649 chr12:50099959-50111773 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 649 4 292 8 0 107 1386 SMARCD1,GPD1,ACCN2,C12ORF62

Genomic distribution of SEs associated with SMARCD1

The strength of the tissue affected by the gene


Expression of SMARCD1