Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000088827
Gene: SIGLEC1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr20:3686970-3707128 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_009100451 chr20:3665711-3688856 Sample_01_0091 Uterus uterus 451 3 790 57 2 124 2628 ADAM33,SIGLEC1,HSPA12B,GFRA4
SE_01_009200362 chr20:3666788-3689075 Sample_01_0092 Vagina vagina 362 4 761 56 2 124 2675 ADAM33,SIGLEC1,HSPA12B,GFRA4
SE_02_086900741 chr20:3670252-3688605 Sample_02_0869 Fibroblast VH10_NO_UV 741 9 623 41 2 124 2030 SIGLEC1,ADAM33,HSPA12B,GFRA4
SE_02_096600554 chr20:3670288-3711462 Sample_02_0966 Brain H3.3K27M_JN29-BS3 554 9 1355 116 5 256 4662 SIGLEC1,ADAM33,HSPA12B,GFRA4
SE_02_096000350 chr20:3670868-3704643 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 350 7 1130 93 5 229 4137 SIGLEC1,ADAM33,HSPA12B,GFRA4
SE_02_037500190 chr20:3676728-3711547 Sample_02_0375 Skeletal muscle RMS216 190 4 1120 104 5 167 3365 ADAM33,SIGLEC1,HSPA12B,GFRA4
SE_00_002900645 chr20:3676783-3687489 Sample_00_0029 Ovary ovary 645 5 359 28 2 30 543 ADAM33,SIGLEC1,HSPA12B,GFRA4
SE_02_061100426 chr20:3676854-3711473 Sample_02_0611 Liposarcoma DDLPS_T1 426 10 1113 104 5 163 3342 SIGLEC1,ADAM33,HSPA12B,GFRA4
SE_02_060500823 chr20:3676927-3687720 Sample_02_0605 Skin Skin Fibroblast_DMSO 823 2 356 28 2 30 549 SIGLEC1,ADAM33,HSPA12B,GFRA4,C20orf27,CENPB,SPEF1
SE_02_060600911 chr20:3676962-3687763 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 911 2 356 28 2 29 548 SIGLEC1,ADAM33,HSPA12B,GFRA4,C20orf27,CENPB,SPEF1
SE_02_097100986 chr20:3677071-3711501 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 986 10 1107 104 5 162 3289 SIGLEC1,ADAM33,HSPA12B,GFRA4

Genomic distribution of SEs associated with SIGLEC1

The strength of the tissue affected by the gene


Expression of SIGLEC1