SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000198574
Gene: SH2D1B Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:162395268-162412138 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_074100600 chr1:162363823-162398838 Sample_02_0741 Muscle RH30 600 7 1036 94 7 142 2422 C1ORF226,NOS1AP,SH2D1B,C1ORF111,MIR556
SE_02_054500494 chr1:162371632-162397714 Sample_02_0545 Bone marrow K562 WT 494 8 801 74 6 104 1577 C1ORF226,C1ORF111,SH2D1B,MIR556,NOS1AP,UAP1,RP11-565P22.6
SE_01_003600581 chr1:162371674-162407500 Sample_01_0036 Cervix HeLa-S3 581 5 1053 102 6 112 1668 C1ORF226,C1ORF111,SH2D1B,NOS1AP,MIR556,C1orf111,C1orf226,RP11-565P22.6,UAP1,UHK1
SE_02_105900288 chr1:162383458-162401549 Sample_02_1059 Bone A673_WT 288 4 500 46 4 44 930 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_147300289 chr1:162383458-162401549 Sample_02_1473 Bone A-673 289 4 500 46 4 44 930 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_148300168 chr1:162383678-162399985 Sample_02_1483 Bone RD-ES 168 8 455 44 4 35 884 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_105800555 chr1:162383727-162400102 Sample_02_1058 Bone A673_SA2 Rescue 555 6 457 44 4 35 879 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_01_006400322 chr1:162384017-162399580 Sample_01_0064 Brain: derived from metastatic site: supra-orbital area SK-N-MC 322 3 434 40 4 35 839 C1ORF226,SH2D1B,NOS1AP,C1ORF111,MIR556
SE_02_148600232 chr1:162384043-162399999 Sample_02_1486 Bone SK-N-MC 232 7 445 43 4 35 838 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_128000468 chr1:162384103-162405312 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 468 6 589 57 4 38 861 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_106000479 chr1:162384211-162402133 Sample_02_1060 Bone TC71_SA2 KO 479 11 488 47 4 36 799 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_148000380 chr1:162384369-162399603 Sample_02_1480 Bone MHH-ES-1 380 9 422 39 4 35 759 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_148200477 chr1:162384449-162401084 Sample_02_1482 Bone POE 477 11 463 43 4 35 747 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_147400478 chr1:162384454-162399828 Sample_02_1474 Bone CHLA-10 478 5 425 41 4 35 747 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_147800180 chr1:162384506-162399409 Sample_02_1478 Bone EW-3 180 4 408 38 4 35 737 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_070100266 chr1:162384539-162399415 Sample_02_0701 Bone David_TC32 266 10 408 38 4 35 724 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_148100341 chr1:162384759-162405163 Sample_02_1481 Bone MIC 341 7 564 53 4 38 728 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_147500532 chr1:162385888-162399852 Sample_02_1475 Bone CHLA-25 532 5 386 38 4 35 475 C1ORF226,SH2D1B,MIR556,NOS1AP,C1ORF111
SE_02_003901005 chr1:162387147-162400276 Sample_02_0039 Embryo AFG 1005 2 363 35 4 27 296 SH2D1B,NOS1AP,C1ORF226,C1ORF111,MIR556
SE_01_001700155 chr1:162387550-162400151 Sample_01_0017 Muscle A673 155 2 349 33 3 26 296 SH2D1B,NOS1AP,C1ORF226,C1ORF111,MIR556
SE_02_148400216 chr1:162388410-162400155 Sample_02_1484 Bone Rh1 216 7 315 31 3 26 296 SH2D1B,MIR556,NOS1AP,C1ORF111,C1ORF226
SE_02_023200616 chr1:162388822-162423133 Sample_02_0232 Tonsil ILC3 616 8 957 92 4 32 411 SH2D1B,NOS1AP,C1ORF226,C1ORF111,MIR556
SE_02_002400390 chr1:162389255-162422112 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 390 20 915 89 4 24 411 SH2D1B,NOS1AP,C1ORF226,C1ORF111,MIR556
SE_02_023100362 chr1:162395653-162422794 Sample_02_0231 Tonsil ILC1 362 6 770 75 1 12 382 SH2D1B,NOS1AP,C1ORF111,C1ORF226
Genomic distribution of SEs associated with SH2D1B
Genome Browser

The strength of the tissue affected by the gene

Expression of SH2D1B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)