SEdb 2.0
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Gene overview

Strategies/Algorithm: overlap Ensembl ID:
Gene: SEPX1 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_024100740 chr16:1892819-1943307 Sample_02_0241 Colon V456 740 13 1776 248 3 120 1047 HS3ST6,SEPX1,SNORA78,NOXO1,C16ORF73,SNORA64,SNHG9,GFER,SNORA10,NCRNA00254,SYNGR3,RNF151,RPL3L,RPS2,NDUFB10,TBL3
SE_02_042400504 chr16:1899375-1944250 Sample_02_0424 Colon SW620 504 10 1596 201 2 113 1110 HS3ST6,SEPX1,SNORA78,NOXO1,C16ORF73,SNORA64,SNHG9,GFER,SNORA10,NCRNA00254,SYNGR3,RNF151,RPL3L,RPS2,NDUFB10,TBL3
SE_01_005200452 chr16:1928773-1944115 Sample_01_0052 Blood neutrophil 452 2 547 41 0 31 631 SEPX1,SNORA78,NOXO1,SNORA64,SNORA10,SNHG9,GFER,HS3ST6,NCRNA00254,SYNGR3,RNF151,RPL3L,RPS2,NDUFB10,TBL3
SE_02_001500620 chr16:1929191-1943383 Sample_02_0015 Liver HepG2_shNS 620 3 478 38 0 29 592 SEPX1,SNORA78,NOXO1,SNORA64,SNORA10,SNHG9,GFER,HS3ST6,NCRNA00254,SYNGR3,RNF151,RPL3L,RPS2,NDUFB10,TBL3
SE_02_036700326 chr16:1939624-1956524 Sample_02_0367 Skeletal muscle NS129 326 2 692 50 1 90 1455 RPL3L,SEPX1,SNORA78,NOXO1,SNORA64,SNORA10,SNHG9,GFER,HS3ST6,SYNGR3,RNF151,RPS2,NDUFB10,TBL3
SE_02_036800287 chr16:1940015-1956569 Sample_02_0368 Skeletal muscle NS134 287 2 679 49 1 90 1455 RPL3L,SEPX1,SNORA78,NOXO1,SNORA64,SNORA10,SNHG9,GFER,HS3ST6,SYNGR3,RNF151,RPS2,NDUFB10,TBL3
SE_00_003200481 chr16:1940297-1955372 Sample_00_0032 Psoas muscle psoas-muscle_30y 481 3 627 41 1 90 1455 RPL3L,SEPX1,SNORA78,NOXO1,SNORA64,SNORA10,SNHG9,GFER,HS3ST6,SYNGR3,RNF151,RPS2,NDUFB10,TBL3
Genomic distribution of SEs associated with SEPX1
Genome Browser

The strength of the tissue affected by the gene

Expression of SEPX1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)